prot_H-paniculata_contig15746.3333.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig15746.3333.1
Unique Nameprot_H-paniculata_contig15746.3333.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length278
Homology
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BLAST of mRNA_H-paniculata_contig15746.3333.1 vs. uniprot
Match: A0A6H5KIB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB2_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 1.260e-25
Identity = 84/165 (50.91%), Postives = 100/165 (60.61%), Query Frame = 0 
Query:  118 GSSADAQPKYSGEGDSPGVEMRSRTAGGAMVGGRRGDEDLLGRGGGNKGVERLGDLLSVYER-NGDTQGERKNGA---AVTSTSATAGTKSTTSSQMGPERH-AAAKALTSTKVALPHHLAPMAGLEDKLRKMRLDMENGRGEGDAPWGAFGRPRTTLGGAKAHK 277
            G SA AQPK+SG GD  GV       G   VG     +D   RGGG    +R  +  ++  R NG   G + +G     V+  SA+AG KS     +G ERH AAAKALT+TKVALPHHL+PM GLEDKL++MR DM+N  G  DAPW AFGRPRT L G K HK
Sbjct:  229 GGSAQAQPKHSGAGDRGGVGR-----GIGAVGADGDHDDRPSRGGGIHESKRPWETDAIRGRTNGLETGSKDSGGDPPGVSQASASAGAKS--GPVIGNERHHAAAKALTNTKVALPHHLSPMTGLEDKLKRMRSDMQNENG--DAPWDAFGRPRTALLGTKQHK 384
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BLAST of mRNA_H-paniculata_contig15746.3333.1 vs. uniprot
Match: D7G2H2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H2_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 1.610e-10
Identity = 75/188 (39.89%), Postives = 89/188 (47.34%), Query Frame = 0 
Query:    1 MTEGPEDWRELRKVSVWQTAEALQQEMEAKMIQAGEKESSSDDVAAREVGIDTNHAGKAVPSELAKARTESTANALASRANNTTEG------AGGERASTLSGSGGGVAEDCSRSQALTSLGAGSSADAQPKYSGEGDSPGVEMRSRTAGGAMVGGRRGDEDLLGRGGGNKGVERLGDLLSVYERNGD 182
            MT+GPE W ELRKVSVWQT  ALQQEMEAKMI+AGEKES+       E+       G+    E AKA +       A+ A N   G      AGG+RA    G  GG                  SA AQPK+SG GD  GV    R  G     G   D D   RGGG   ++R  +  ++  R  D
Sbjct:  524 MTKGPEGWEELRKVSVWQTTAALQQEMEAKMIKAGEKESAETRAGGSELD-----GGQQEGEEHAKATSTMMIEGGAASAANEQGGSRGAGWAGGDRADPAIGGSGGXFPXXXXXXX--------SAQAQPKHSGAGDRGGV---GRGIGAVGADGNNHD-DRPSRGGGVHELKRPWETGAIRGRTND 694
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15746.3333.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KIB2_9PHAE1.260e-2550.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2H2_ECTSI1.610e-1039.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 235..255

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15746contigH-paniculata_contig15746:1728..4958 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15746.3333.1mRNA_H-paniculata_contig15746.3333.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig15746 1063..5622 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig15746.3333.1 ID=prot_H-paniculata_contig15746.3333.1|Name=mRNA_H-paniculata_contig15746.3333.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=278bp
MTEGPEDWRELRKVSVWQTAEALQQEMEAKMIQAGEKESSSDDVAAREVG
IDTNHAGKAVPSELAKARTESTANALASRANNTTEGAGGERASTLSGSGG
GVAEDCSRSQALTSLGAGSSADAQPKYSGEGDSPGVEMRSRTAGGAMVGG
RRGDEDLLGRGGGNKGVERLGDLLSVYERNGDTQGERKNGAAVTSTSATA
GTKSTTSSQMGPERHAAAKALTSTKVALPHHLAPMAGLEDKLRKMRLDME
NGRGEGDAPWGAFGRPRTTLGGAKAHK*
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