mRNA_H-paniculata_contig15646.3279.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig15646.3279.1
Unique NamemRNA_H-paniculata_contig15646.3279.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig15646.3279.1 vs. uniprot
Match: W8BWJ0_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BWJ0_CERCA)

HSP 1 Score: 112 bits (279), Expect = 1.950e-22
Identity = 63/164 (38.41%), Postives = 95/164 (57.93%), Query Frame = 2
Query:  368 VRRLHKSMYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLFFSHDDREETNLLVAVYVGGLVIAGRRE-KVDKFKHKVSV-FRTKDLGSLSRVLGIEVRRDRPNGTITISQVSYIRGVLKINGFDECRGVPTP*VQ------QSSRRRSGNSTEYRGVVGSIMY 835
            V +L K++YGLKQSGR WNNTLD+ L  +G  RS  ++CL+     +++ +  +AVYV  L+I    E ++   K ++S  F   D GSLS  LG+E++RD   G +++ Q +YIR +LK  G   CR V TP         +       N T+Y+ ++GS+MY
Sbjct:  960 VLKLKKAIYGLKQSGRAWNNTLDEVLQNMGFKRSKNEACLYVKQ--QQQGSSYIAVYVDDLIIISPSENEICAIKRQISSKFEMHDSGSLSYFLGLEIQRDGKQGYVSLCQKTYIRNLLKTYGMQNCRAVATPLDPGFLVCCKDDSCVKVNVTQYQSLIGSLMY 1121          
BLAST of mRNA_H-paniculata_contig15646.3279.1 vs. uniprot
Match: W7T0T3_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T0T3_9STRA)

HSP 1 Score: 110 bits (276), Expect = 3.980e-22
Identity = 66/169 (39.05%), Postives = 94/169 (55.62%), Query Frame = 2
Query:  350 SRDAPFVRRLHKSMYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLFFSHDDREETNLLVAVYVGGLVIAGR-REKVDKFKHKVS-VFRTKDLGSLSRVLGIEVRRDRPNGTITISQVSYIRGVLKINGFDECRGVPTP*VQQSSRRRSGNST----EYRGVVGSIMYA 838
            S     V RL KS+YGLKQSGRNW+  +D +  G G   S+ D CL+       E  L++ +YV  L+I    RE V+KFKH +S  F  KDL  L  +LG+ ++RDR    + ISQ +YI  +L   G  +C+ V TP ++ +  +  G       EY  +VGS++YA
Sbjct:  552 SNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEI-LVIVLYVDDLIITSNSREMVNKFKHAISREFSMKDLKELDWILGMAIKRDREKRVMEISQTAYIDMMLAKFGMADCKPVLTP-MEGTLTKMDGKDVKPDNEYMKLVGSLLYA 718          
BLAST of mRNA_H-paniculata_contig15646.3279.1 vs. uniprot
Match: A0A146H3U8_MYCCL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H3U8_MYCCL)

HSP 1 Score: 108 bits (271), Expect = 6.560e-22
Identity = 62/170 (36.47%), Postives = 96/170 (56.47%), Query Frame = 2
Query:  368 VRRLHKSMYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLFFSHDDREETNLLVAVYVGGLVI-AGRREKVDKFKHKV-SVFRTKDLGSLSRVLGIEVRRDRPNGTITISQVSYIRGVLKINGFDECRGVPTP*VQQSSRRRS-----------GNSTEYRGVVGSIMYA 838
            V RL KS+YGL QSGR WN   D  +  IGL ++  D+C+++   D E   + V V+V  L+I A  +++ ++ K ++ ++F  KDLG   +++GIEV RDR  GT+T+SQ  YI  +L   GF +  GV TP V  ++ +                 EY+ ++G +MYA
Sbjct:  116 VWRLKKSLYGLHQSGREWNREFDQKVQTIGLTKTAADNCVYYRERDGER--VWVTVWVDDLIILATSKDEGERVKKELDTLFEMKDLGEPRKIIGIEVTRDRSAGTVTLSQRHYIESLLDRYGFSDLNGVSTPLVPDANTKMRQLPKDAPPTAPSARAEYQSMIGGLMYA 283          
BLAST of mRNA_H-paniculata_contig15646.3279.1 vs. uniprot
Match: W7TIM1_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIM1_9STRA)

HSP 1 Score: 110 bits (274), Expect = 7.310e-22
Identity = 66/164 (40.24%), Postives = 92/164 (56.10%), Query Frame = 2
Query:  365 FVRRLHKSMYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLFFSHDDREETNLLVAVYVGGLVIAGR-REKVDKFKHKVS-VFRTKDLGSLSRVLGIEVRRDRPNGTITISQVSYIRGVLKINGFDECRGVPTP*VQQSSRRRSGNST----EYRGVVGSIMYA 838
             V RL KS+YGLKQSGRNW+  +D +  G G   S+ D CL+       E  L++ +YV  L+I    RE VDKFK  +S  F  KDL  L  +LG+ ++R+R    + ISQ +YI  VL   G  +CR V TP ++ +  +  G       EY  +VGS++YA
Sbjct:  346 LVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEM-LVIVLYVDDLIITSNSREMVDKFKQAISREFSMKDLKELDWILGMAIKRNREKRVMEISQTAYIDMVLNKFGMADCRPVLTP-MEGTLTKMDGKDAKPDNEYMKLVGSLLYA 507          
BLAST of mRNA_H-paniculata_contig15646.3279.1 vs. uniprot
Match: A0A4Q2D651_9AGAR (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Candolleomyces aberdarensis TaxID=2316362 RepID=A0A4Q2D651_9AGAR)

HSP 1 Score: 110 bits (274), Expect = 8.720e-22
Identity = 67/172 (38.95%), Postives = 94/172 (54.65%), Query Frame = 2
Query:  374 RLHKSMYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLFFSHDDREETNLLVAVYVGGLVIAGR-REKVDKFKHKVSV-FRTKDLGSLSRVLGIEVRRDRPNGTITISQVSYIRGVLKINGFDECRGVPTP*VQQSSRRRS---------------GNSTEYRGVVGSIMYA 838
            +L +S+YGLKQSGR WN TLD  L+ +GL R   ++CL+   +D E   L+V  YV  L++A   R  ++K K  +S  F+ KDLG    +LG+ + RDR NG I +SQ +YI  VL+  G   C   PTP +  S++                  G    Y+ VVGS+MYA
Sbjct: 1138 KLKRSLYGLKQSGRTWNKTLDQSLLSMGLVRLDAETCLYVYKEDGEVCFLVV--YVDDLLLAATSRPFMNKVKAMLSSRFKMKDLGEAKFILGMAIHRDRRNGEIRLSQRNYIANVLERTGMSHCSPAPTP-IPTSAKATEDDPVDNTILHSITIEGREVSYKSVVGSLMYA 1306          
BLAST of mRNA_H-paniculata_contig15646.3279.1 vs. uniprot
Match: Q18L98_CITSI (Putative gag-pol polyprotein n=2 Tax=Citrus sinensis TaxID=2711 RepID=Q18L98_CITSI)

HSP 1 Score: 109 bits (273), Expect = 1.110e-21
Identity = 64/168 (38.10%), Postives = 94/168 (55.95%), Query Frame = 2
Query:  365 FVRRLHKSMYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLFFSHDDREETNLLVAVYVGGLVIAGR-REKVDKFKHKVSV-FRTKDLGSLSRVLGIEVRRDRPNGTITISQVSYIRGVLKINGFDECRGVPTP*VQQ--------SSRRRSGNSTEYRGVVGSIMYA 838
            +V  LHKS+YGLKQS R W    DDF+V  G  RS  DSC++F   D+     L+ +YV  ++IA + + ++++ K+ +   F  KDLG+  R+LG+++ RDR  GT+ +SQ  YI+ VL+     +C+ V TP   Q        S      N   Y   VGS+MYA
Sbjct:  956 YVCLLHKSLYGLKQSPRQWYRRFDDFMVSKGYRRSRYDSCVYFGGSDQGGVAYLL-LYVDDMLIASKYKSEIERLKNLLKAEFEMKDLGNAKRILGMDIIRDRSAGTLFLSQGKYIKKVLERFEMQDCKPVQTPLGPQFKLSAATTSEDESQMNEFPYAQAVGSLMYA 1122          
BLAST of mRNA_H-paniculata_contig15646.3279.1 vs. uniprot
Match: W7TJ26_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ26_9STRA)

HSP 1 Score: 108 bits (269), Expect = 2.460e-21
Identity = 65/164 (39.63%), Postives = 91/164 (55.49%), Query Frame = 2
Query:  365 FVRRLHKSMYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLFFSHDDREETNLLVAVYVGGLVIAGR-REKVDKFKHKVS-VFRTKDLGSLSRVLGIEVRRDRPNGTITISQVSYIRGVLKINGFDECRGVPTP*VQQSSRRRSGNST----EYRGVVGSIMYA 838
             V RL KS+YGLKQSGRNW+  +D +  G GL  S  D CL+       E  L++ +YV  L+I    R   DKFK  +S  F  KDL  L  +LG+ ++R+R N T+ ISQ  YI  +L   G  +C+ V TP ++ +  +  G       EY  +VGS++YA
Sbjct:  337 LVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGLHPSYADPCLYVKFASSGEI-LVIVLYVDDLIIGSNSRTMTDKFKQDISREFSMKDLKELDWILGMGIKRNRENRTMEISQTGYIGMMLNKFGMADCKSVLTP-MEGTLTKMDGKDVKPDNEYMKLVGSLLYA 498          
BLAST of mRNA_H-paniculata_contig15646.3279.1 vs. uniprot
Match: Q9SZY0_ARATH (Putative retrotransposon n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9SZY0_ARATH)

HSP 1 Score: 108 bits (270), Expect = 2.580e-21
Identity = 65/171 (38.01%), Postives = 94/171 (54.97%), Query Frame = 2
Query:  377 LHKSMYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLFF-SHDDREETNLLVAVYVGGLVIAGR-REKVDKFKHKVSV-FRTKDLGSLSRVLGIEVRRDRPNGTITISQVSYIRGVLKINGFDECRGVPTP*-----------VQQSSRRRSGNSTEYRGVVGSIMYASTD 847
            L+K+MYGLKQS R WN   D +++ IG +RS  + C +  S +D  +  LL+  YV  +++A R  + + + K K+S  F  KDLG+  R+LG+E+ RDR  GT+T+SQ  Y+  VL+    D+C+ V TP             Q  S      S  Y   VGSIMY+  D
Sbjct:  883 LNKTMYGLKQSPRRWNQKFDSYMLEIGFERSPRNKCAYIKSLEDGSKVYLLI--YVDDMLVAARDMQVISELKQKLSEKFEMKDLGAAKRILGMEISRDRVKGTLTLSQEDYLSKVLETYNVDQCKFVVTPLGAHLKMHAATEQQLLSDEEYMKSVPYSNAVGSIMYSMID 1051          
BLAST of mRNA_H-paniculata_contig15646.3279.1 vs. uniprot
Match: W7TCB8_9STRA (Gag-pol polyprotein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCB8_9STRA)

HSP 1 Score: 106 bits (265), Expect = 2.950e-21
Identity = 65/169 (38.46%), Postives = 92/169 (54.44%), Query Frame = 2
Query:  350 SRDAPFVRRLHKSMYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLFFSHDDREETNLLVAVYVGGLVIAGR-REKVDKFKHKVS-VFRTKDLGSLSRVLGIEVRRDRPNGTITISQVSYIRGVLKINGFDECRGVPTP*VQQSSRRRSGNST----EYRGVVGSIMYA 838
            S     V RL KS+YGLKQSGRNW+  +D +  G G   S+ D CL+       E  L++ +YV  L+I    RE V KFKH +S  F  KDL  L  +LG+ ++RDR    + ISQ +YI  +L      +C+ V TP ++ +  +  G       EY  +VGS++YA
Sbjct:  112 SNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEI-LVIVLYVDDLIITSNSREMVGKFKHAISREFSMKDLKELDWILGMAIKRDRGKRVMEISQTAYIDMMLAKFRMADCKPVLTP-MEGTLTKMDGKDVKPDNEYMKLVGSLLYA 278          
BLAST of mRNA_H-paniculata_contig15646.3279.1 vs. uniprot
Match: A0A8D8HJI9_CULPI (Copia protein n=1 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8HJI9_CULPI)

HSP 1 Score: 107 bits (266), Expect = 3.210e-21
Identity = 64/170 (37.65%), Postives = 92/170 (54.12%), Query Frame = 2
Query:  347 FSRDAPFVRRLHKSMYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLFFSHDDREETNLLVAVYVGGLVIAGRREK-VDKFKHKVSV-FRTKDLGSLSRVLGIEVRRDRPNGTITISQVSYIRGVLKINGFDECRGVPTP*VQQSSRRRSGNSTE-----YRGVVGSIMY 835
            F R    V +L++S+YGLKQS RNWN   DD++  +G  RS  D CL+    D   T +L+  YV  ++IAG   K +   K K+S  F  KD+      LG+ + RDR  G++TI Q +Y  GVLK  G + C+  P P +Q   +   G+  E     Y+ +VG +MY
Sbjct:  136 FERGKDLVCKLNRSIYGLKQSSRNWNRRFDDYVTKLGFKRSQHDLCLYHWKADGVVTYMLI--YVDDILIAGNDLKAIRALKGKLSTEFEMKDMEEAKIFLGLRIDRDRKAGSMTIDQKAYTLGVLKRFGMENCKSSPVP-MQPRLKLERGDPKELTEKPYKELVGCLMY 302          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15646.3279.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W8BWJ0_CERCA1.950e-2238.41Retrovirus-related Pol polyprotein from transposon... [more]
W7T0T3_9STRA3.980e-2239.05Gag-pol polyprotein n=2 Tax=Nannochloropsis gadita... [more]
A0A146H3U8_MYCCL6.560e-2236.47Reverse transcriptase Ty1/copia-type domain-contai... [more]
W7TIM1_9STRA7.310e-2240.24Gag-pol polyprotein n=1 Tax=Nannochloropsis gadita... [more]
A0A4Q2D651_9AGAR8.720e-2238.95Integrase catalytic domain-containing protein (Fra... [more]
Q18L98_CITSI1.110e-2138.10Putative gag-pol polyprotein n=2 Tax=Citrus sinens... [more]
W7TJ26_9STRA2.460e-2139.63Gag-pol polyprotein n=2 Tax=Nannochloropsis gadita... [more]
Q9SZY0_ARATH2.580e-2138.01Putative retrotransposon n=1 Tax=Arabidopsis thali... [more]
W7TCB8_9STRA2.950e-2138.46Gag-pol polyprotein n=3 Tax=Nannochloropsis gadita... [more]
A0A8D8HJI9_CULPI3.210e-2137.65Copia protein n=1 Tax=Culex pipiens TaxID=7175 Rep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15646contigH-paniculata_contig15646:4347..5861 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score94.4
Seed ortholog evalue4.1e-17
Seed eggNOG ortholog164328.Phyra87462
Hectar predicted targeting categoryother localisation
EggNOG free text desc.gag-polypeptide of LTR copia-type
EggNOG OGs3QHJF@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons2
Model size1421
Cds size375
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15646.3279.1prot_H-paniculata_contig15646.3279.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig15646 5005..5473 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929249.8129158-UTR-H-paniculata_contig15646:4346..50041622929249.8129158-UTR-H-paniculata_contig15646:4346..5004Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15646 4347..5004 -
1691480787.1390982-UTR-H-paniculata_contig15646:4346..50041691480787.1390982-UTR-H-paniculata_contig15646:4346..5004Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15646 4347..5004 -
1622929249.853839-UTR-H-paniculata_contig15646:5473..58611622929249.853839-UTR-H-paniculata_contig15646:5473..5861Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15646 5474..5861 -
1691480787.1730363-UTR-H-paniculata_contig15646:5473..58611691480787.1730363-UTR-H-paniculata_contig15646:5473..5861Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15646 5474..5861 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929249.8244407-CDS-H-paniculata_contig15646:5004..50061622929249.8244407-CDS-H-paniculata_contig15646:5004..5006Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15646 5005..5006 -
1691480787.1507356-CDS-H-paniculata_contig15646:5004..50061691480787.1507356-CDS-H-paniculata_contig15646:5004..5006Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15646 5005..5006 -
1622929249.840568-CDS-H-paniculata_contig15646:5100..54731622929249.840568-CDS-H-paniculata_contig15646:5100..5473Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15646 5101..5473 -
1691480787.1606226-CDS-H-paniculata_contig15646:5100..54731691480787.1606226-CDS-H-paniculata_contig15646:5100..5473Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15646 5101..5473 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig15646.3279.1

>prot_H-paniculata_contig15646.3279.1 ID=prot_H-paniculata_contig15646.3279.1|Name=mRNA_H-paniculata_contig15646.3279.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=125bp
MYGLKQSGRNWNNTLDDFLVGIGLDRSTTDSCLFFSHDDREETNLLVAVY
VGGLVIAGRREKVDKFKHKVSVFRTKDLGSLSRVLGIEVRRDRPNGTITI
SQVSYIRGVLKINGFDECRGVPTP*
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mRNA from alignment at H-paniculata_contig15646:4347..5861-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig15646.3279.1 ID=mRNA_H-paniculata_contig15646.3279.1|Name=mRNA_H-paniculata_contig15646.3279.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1515bp|location=Sequence derived from alignment at H-paniculata_contig15646:4347..5861- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGCGTAGTGGAAGAAGAATGGGGGGCGTTGGTGGAAAATGGGACATGGGA AAGCGAAGACGCGGGAAGGTTACCGGCAGGGCGGAAGGCGATTCGTACGA AACTGAAGGAGGACAGCAGCGTGGCACGCTACAAAGCGCGACTGGTGGCT GAAGGTTTTTCACAGGTGGAGGGTGAAGATTTCTTTGAAACAATGCCCCC ATCGCTCGCATGTCGACATTACGTGCTGTTTTTAGCCTGGCCCCCGAATA TCATTTCGAATTAGAAGTTATGGACGTAGGTGCGGCGTACTGGAATGTCC CGGTAGAAGAAGAGTTGTTTGTTAAGCTACCCCCAAGCTTTCCCCTTTCT CCCGAGACGCACCGTTTGTGCGTCGCCTGCATAAAAGCATGTACGGCCTC AAGCAGAGCGGCCGAAACTGGAATAACACTCTTGATGATTTTCTTGTTGG GATAGGACTCGACCGTTCCACTACCGACTCATGCCTTTTCTTTTCTCACG ACGACAGGGAAGAGACAAACCTCCTGGTGGCCGTCTATGTTGGTGGCCTG GTCATTGCTGGCCGTCGTGAGAAAGTAGACAAGTTCAAGCATAAAGTCAG CGTTTTCAGGACGAAAGACTTGGGCTCTCTCTCGCGCGTGTTGGGAATAG AAGTACGACGTGACCGCCCTAATGGTACCATAACCATCTCGCAGGTTAGC TACATTCGTGGGGTACTAAAAATAAACGGTTTTGACGAGTGTCGAGGAGT ACCCACCCCATGTAGAGGGAAACGTGAAGATTTCGGCACCCGAGTCGGCC GATAAGCCCTCCAAACCGAAGTCACTTGGATCTGTACAGTCAGACATAGG CGCAGGAGTACAACAAAGCAGCAGACGGAGAAGTGGCAATTCAACTGAAT ACAGAGGGGTGGTAGGATCAATCATGTACGCCTCGACAGACTAGACCTGA TATAGCATACGCGGTACAACAAGCAGCACGTCGTATGGAGGGCCCATGTC GGGAAGACTTCATTCAGTACATGCAAGCACATTTTTTGTCATCTCAGGAC TGAGCCTGACCTCGGCGTTACGTTCGCCGGTAAGAGTAATGGTTACGGTC TGGACGGATTGGTTGATGTCGATTGGGCGGAAGATGTCGAGGACCGAAAG TCCACAGCAGGATACGTATTCAAACTAAATGTTGGTGCGATAAGCTGGTG CTCTAGGAAGCAGCAGTTAGCCACGTGGTCCAGCACAAAGGCAGAGTACA TTTCTGCAGGAGAAACGGGGAAGGAGACGGTGTCTCTTTGGGAGTTAATA GGATCGATAGGTTCGGGTGCAAGGGGAGCACAACATTGTTTGAGGACAAT GGATCAGCTATTAATCTCAGTAAGGGATCTGACGCACACTGCAGGACAAA GCACATCGGAGTGCGTTGGCGCGGAATTCGAGAGTGGATTCGGGAAGGAG TATTAGAGTTGAAATACGTGCAGACCGGCGACCAACTTGCTGACATTTTT ACGAGAGGACTGAGC
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Coding sequence (CDS) from alignment at H-paniculata_contig15646:4347..5861-

>mRNA_H-paniculata_contig15646.3279.1 ID=mRNA_H-paniculata_contig15646.3279.1|Name=mRNA_H-paniculata_contig15646.3279.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=750bp|location=Sequence derived from alignment at H-paniculata_contig15646:4347..5861- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTACGGCCTCAAGCAGAGCGGCCGAAACTGGAATAACACTCTTGATGA
TTTTCTTGTTGGGATAGGACTCGACCGTTCCACTACCGACTCATGCCTTT
TCTTTTCTCACGACGACAGGGAAGAGACAAACCTCCTGGTGGCCGTCTAT
GTTGGTGGCCTGGTCATTGCTGGCCGTCGTGAGAAAGTAGACAAGTTCAA
GCATAAAGTCAGCGTTTTCAGGACGAAAGACTTGGGCTCTCTCTCGCGCG
TGTTGGGAATAGAAGTACGACGTGACCGCCCTAATGGTACCATAACCATC
TCGCAGGTTAGCTACATTCGTGGGGTACTAAAAATAAACGGTTTTGACGA
GTGTCGAGGAGTACCCACCCCATATGTACGGCCTCAAGCAGAGCGGCCGA
AACTGGAATAACACTCTTGATGATTTTCTTGTTGGGATAGGACTCGACCG
TTCCACTACCGACTCATGCCTTTTCTTTTCTCACGACGACAGGGAAGAGA
CAAACCTCCTGGTGGCCGTCTATGTTGGTGGCCTGGTCATTGCTGGCCGT
CGTGAGAAAGTAGACAAGTTCAAGCATAAAGTCAGCGTTTTCAGGACGAA
AGACTTGGGCTCTCTCTCGCGCGTGTTGGGAATAGAAGTACGACGTGACC
GCCCTAATGGTACCATAACCATCTCGCAGGTTAGCTACATTCGTGGGGTA
CTAAAAATAAACGGTTTTGACGAGTGTCGAGGAGTACCCACCCCATGAGA
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