mRNA_H-paniculata_contig15561.3246.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig15561.3246.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 243 bits (620), Expect = 1.800e-75 Identity = 126/242 (52.07%), Postives = 157/242 (64.88%), Query Frame = 1
Query: 1 PSLSFHHKKNRVDFALDHMSRDRRTFKTGNNTIHVDESWFYLIRDKEKVRMFPGEEKVGSIKVPHKSHIPKLMFICAVSRPDPAHDFDGKIGIWRVCVIKEAQRT-------TARRARG----------------EEYEVDVTIDAECYQSWYLEDLLSAVKSKMWWLEGEDAIVQQDGGTPHTGKDTPKTLNRAGREGG*CIKLVTQPAQSPDFNINDLGFFASPKSRVCGERFGTVDALV 657
PSLS K++R+DF D + + N +H+DESWFYL+R+KEKVR+F GE+ G +VPH+SH+PK+M I A +RPDPAHDFDGKIGIWR+CVI+ AQR+ TA R EEYE D TIDAE Y+ WY++ LL A+K KM WL + +VQQDG +PHTGK P+ LN AG G ++LVTQPAQSPD NINDLG FAS K RV G ++D LV
Sbjct: 123 PSLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDELV 364
BLAST of mRNA_H-paniculata_contig15561.3246.1 vs. uniprot
Match: A0A6A4Z9D8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z9D8_9STRA) HSP 1 Score: 145 bits (365), Expect = 1.360e-37 Identity = 89/284 (31.34%), Postives = 152/284 (53.52%), Query Frame = 1
Query: 1 PSLSFHHKKNRVDFALDHM---SRDRRTFKTGNNTIHVDESWFYLIRDKEKVRMFPGEEKVGSIKVPHKSHIPKLMFICAVSRP--DPAHD--FDGKIGIWRVCVIKEAQRTTARRARGEEYEVDVTIDAECYQSWYLEDLLSAVKSKMWWLEGEDAIVQQDGGTPHTGKDTPKTLNRAGREGG*CIKLVTQPAQSPDFNINDLGFFASPKSRVCGERFGTVDALVEGVKSMYNAYDAETLERVWQSLFKRYNQVLKAKGEDDFEVGHTGTNKRQREGRLAKRV 831
P L+ HK +R+ F H+ + +R + +T+H+DE WFY+ + + ++ +E V + K K HI K+MF+ AV+RP D + +DG+IG+W + A R++ R RG++ T+ + Y+S+ ++ ++ AV+SK + +QQD PH + P + AGR+GG I L +QPAQSPD N+ DLG+F + +S T+D LV V + + L++ + +L K + K G++DF++ H + +EG L R+
Sbjct: 10 PMLTDKHKSDRMAFVQRHLRTGASGKRYWHDMLDTVHIDEKWFYVTKQNRRYYLW-SDEAVPTRKCRSKKHITKVMFLTAVARPRYDARNKRMWDGRIGMWPFVKTRPALRSSKNRKRGDDVTEPFTVTRDVYRSFLIDKVIPAVRSKWPSSKKNQIWIQQDNAKPHVSVNDPAVV-AAGRQGGWTISLCSQPAQSPDLNVLDLGYFNAIQSLQHQMATYTLDDLVVAVVKSFEELECTVLDKTFMTLQKVMECIFKMGGDNDFKLPHQKKHGLVKEGPLPTRL 291
BLAST of mRNA_H-paniculata_contig15561.3246.1 vs. uniprot
Match: UPI001C2659A6 (uncharacterized protein LOC121754350 n=3 Tax=Salvia splendens TaxID=180675 RepID=UPI001C2659A6) HSP 1 Score: 143 bits (361), Expect = 3.020e-36 Identity = 99/293 (33.79%), Postives = 150/293 (51.19%), Query Frame = 1
Query: 1 PSLSFHHKKNRVDFALDHMSRDRRT----FKTGNNTIHVDESWFYLIRDKEKVRMFPGEEKVGSIKVPH-----KSHIPKLMFICAVSRPDPAHD----FDGKIGIWRVCVIKEAQRTTARRARGE-EYEVDVTIDAECYQSWYLEDLLSAVKSKMWWLEGEDAIV--QQDGGTPHTGKDTPKTLNRAGREGG*CIKLVTQPAQSPDFNINDLGFFASPKSRVCGERFGTVDALVEGVKSMYNAYDAETLERVWQSLFKRYNQVLKAKGEDDFEVGHTGTNKRQREGRLAKRV 831
P+L+ H R+ F L + DR F+ +NTIH+DE WFY+ + ++ + PGE + PH K I K+MF+CAVSRP + FDGKIGI+ AQRT+ R G E + +I E + + ++ A+ K W EG + QQD PH KDT A ++ G + LV QP SPD N+NDLG+F + +S T+D L++ V+ ++ +TL+ V+ SL ++LK KG++ ++V H G N +R +L K +
Sbjct: 128 PNLTADHMLLRLRFTLQSLELDRILNRIMFRNMDNTIHIDEKWFYITQGSQRFYLAPGEAE------PHRTCKNKKFISKIMFMCAVSRPLFGQNGEVLFDGKIGIFPFTKQVAAQRTSKNRVAGTMETKPIESITKEVTKQCLINKIIPAIFEK--WPEGASKRIRIQQDNAKPHI-KDTDPDFKVAAQQHGFSMSLVQQPPCSPDTNVNDLGWFRAIQSLQVQTACKTIDDLIKAVEKSFHDLSPQTLDNVFLSLQSCMVEILKVKGQNSYKVPHLGKNNLRRNAQLPKNL 411
BLAST of mRNA_H-paniculata_contig15561.3246.1 vs. uniprot
Match: I6THG9_PSEMU (Tranposase n=1 Tax=Pseudo-nitzschia multiseries TaxID=37319 RepID=I6THG9_PSEMU) HSP 1 Score: 143 bits (361), Expect = 6.930e-36 Identity = 97/280 (34.64%), Postives = 145/280 (51.79%), Query Frame = 1
Query: 1 PSLSFHHKKNRVDFALDHMSRDRRTFKTGNNTIHVDESWFYLIRDKEKVRMFPGEEKVGSIKVPHKSHIPKLMFICAVSRP----DPAHDFDGKIGIWRVCVIKEAQRTTARRARGEEYEVDV-TIDAECYQSWYLEDLLSAVKSK--MWWLEGEDAIVQQDGGTPHTGKDTPKTLNRAGREGG*CIKLVTQPAQSPDFNINDLGFFASPKSRVCGERFGTVDALVEGVKSMYNAYDAETLERVWQSLFKRYNQVLKAKGEDDFEVGHTGTNKRQREGRL 819
P L+ +KK RV+FAL + D + F+ +TIH+DE WFYL +K + GE + S K I K+MF+CAV+RP D FDGKIGIW V + AQR + R RG ++ +++A YQ LE +L A++ K + W + +Q+D PH + + A RE G I + TQP SPDFN+ DLGFFAS ++ +R +D L+ V+ L ++ SL + +K +G + +++ H G K +E L
Sbjct: 202 PFLTEKNKKARVEFALSLIKPDGK-FEDMYDTIHIDEKWFYLKTTNQKTYLCSGEPEPHST-CKSKRFIEKVMFLCAVARPRHDADRNAGFDGKIGIWPFVVKEPAQRNSVNRPRGTMVTKNIPSVNAAEYQKMMLEKVLPAIQEKFPVCW-KSRPIFIQEDNAKPHHLRSRA-AVREAAREAGWNITVTTQPPNSPDFNVLDLGFFASIQALQYKKRAKNIDQLIANVEEALVETSTIALNSIFLSLQCALEESIKVQGNNSYKLRHMGKEKLLKEDNL 477
BLAST of mRNA_H-paniculata_contig15561.3246.1 vs. uniprot
Match: A0A448ZNT1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNT1_9STRA) HSP 1 Score: 143 bits (360), Expect = 1.470e-35 Identity = 94/280 (33.57%), Postives = 140/280 (50.00%), Query Frame = 1
Query: 1 PSLSFHHKKNRVDFALDHMSRDRRTFKTGNNTIHVDESWFYLIRDKEKVRMFPGEEKVGSIKVPHKSHIPKLMFICAVSRP----DPAHDFDGKIGIWRVCVIKEAQRTTARRARGEEYEVDVTIDAECYQSWYLEDLLSAVKSKMWWLEGE---DAIVQQDGGTPHTGKDTPKTLNRAGREGG*CIKLVTQPAQSPDFNINDLGFFASPKSRVCGERFGTVDALVEGVKSMYNAYDAETLERVWQSLFKRYNQVLKAKGEDDFEVGHTGTNKRQREGRL 819
P L+ +K RV++ L+H+ D F IH+DE WFYL R K+ + PGE + S K+H+ K+MF+CA +RP + FDGKIGIW V + A+R++ R +G +D E Y+ LE +L A+ K W G + +Q+D PH + + A G I + TQP SPD N+ DLGFF S +S +R +D L+ V+ ++ ETL V+ SL L G++++++ H G REG L
Sbjct: 235 PLLTAKNKLKRVEWILEHID-DNGRFDDWFKWIHIDEKWFYLKRTKQTTYLLPGEAEPKSTSK-SKNHMTKVMFLCATARPRWDTNNCAWFDGKIGIWPFVVKEPAKRSSVNRPKGTLVTKPQNVDGEVYKRMLLEKVLPAIYEK--WPRGSSTPEIFIQEDNAKPHKAT-IREEVKAAAASKGWNITVKTQPPNSPDMNVLDLGFFNSIQSLQYKKRSKDIDHLIANVEEAFDECKRETLNNVFLSLQACMEASLGVDGDNNYKLPHMGKASLMREGTL 509
BLAST of mRNA_H-paniculata_contig15561.3246.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA) HSP 1 Score: 141 bits (355), Expect = 2.820e-35 Identity = 84/268 (31.34%), Postives = 145/268 (54.10%), Query Frame = 1
Query: 1 PSLSFHHKKNRVDFALDHMS---RDRRTFKTGNNTIHVDESWFYLIRDKEKVRMFPGEEKVGSIKVPHKSHIPKLMFICAVSRP--DPAHD--FDGKIGIWRVCVIKEAQRTTARRARGEEYEVDVTIDAECYQSWYLEDLLSAVKSKMWWLEGEDAIVQQDGGTPHTGKDTPKTLNRAGREGG*CIKLVTQPAQSPDFNINDLGFFASPKSRVCGERFGTVDALVEGVKSMYNAYDAETLERVWQSLFKRYNQVLKAKGEDDFEVGH 783
P L+ H+ R +FA + + RR + + +H+DE WFY+ + + ++ +E K K HI K+MF+CAV+RP D AH +DGK+G+W + A+R + R RG V +T+ Y+ + ++ ++ A++++ G VQQD PH D P+ L AGR+ G I+L+ QPAQSPDFN+ DLGFF + +S T+D L++ V+ + L++ + +L K + +++ G++ +++ H
Sbjct: 135 PMLTPQHRVARYNFAKSFIRDGYQGRRQWHDMLDCVHIDEKWFYITQVNRRFYLW-HDEPTPQRKAQSKRHITKVMFLCAVARPRHDSAHRKMWDGKVGLWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVDDPEVL-AAGRKEGWNIQLMAQPAQSPDFNVLDLGFFNAIQSLQHQTTARTIDDLIKCVEDAFENLAWRVLDKTFMTLQKVMEEAMRSSGDNVYKLPH 400
BLAST of mRNA_H-paniculata_contig15561.3246.1 vs. uniprot
Match: A0A6A4ECW5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4ECW5_9STRA) HSP 1 Score: 139 bits (350), Expect = 1.530e-34 Identity = 98/288 (34.03%), Postives = 149/288 (51.74%), Query Frame = 1
Query: 1 PSLSFHHKKNRVDFALDHMSR--DRRTFKTGNNTIHVDESWFYLIRDKEKVRMFPGEEKVGSIKVPH-----KSHIPKLMFICAVSRPDPAHD----FDGKIGIWRVCVIKEAQRTTARRARG--EEYEVDVTIDAECYQSWYLEDLLSAVKSKMW--WLEGEDAIVQQDGGTPHTGKDTPKTLNRAGREGG*CIKLVTQPAQSPDFNINDLGFFASPKSRVCGERFGTVDALVEGVKSMYNAYDAETLERVWQSLFKRYNQVLKAKGEDDFEVGHTGTNKRQREGRL 819
P L+ +K R+ A+ H+ + F N +HVDE WF +DK+ + PGE VPH K I K MF+ AV+RP ++ FDGKIGIW +AQ ++ R G E +D T++ E Y+ + LE ++ A+KSK W W + ++QQD TPH P L AG G I+L QPA SPD N DLG+FAS ++ E + L++ ++ Y A + L+ + +L V++A G +++++ H G +K +REG+L
Sbjct: 161 PLLTLANKHARIRHAIRHVMHGPNGSYFVPMYNVVHVDEKWFNEDKDKKVFYLLPGET------VPHRERKSKRFIGKTMFLAAVARPRFDNNGQVLFDGKIGIWDFTHKVDAQHSSKNRPAGTLETKNLD-TVNREVYKRYLLEHIIPAIKSK-WPVWDKSSPIVIQQDNATPHCQPTDPDIL-AAGVADGWNIRLAFQPANSPDLNTLDLGYFASIQALPYREDCCDIVQLIQAIRKSYAALEVYKLDNITLTLQSSMECVMRAAGSNEYKLPHAGKSKIRREGKL 439
BLAST of mRNA_H-paniculata_contig15561.3246.1 vs. uniprot
Match: A0A0W8C4B7_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8C4B7_PHYNI) HSP 1 Score: 135 bits (340), Expect = 5.130e-34 Identity = 95/289 (32.87%), Postives = 144/289 (49.83%), Query Frame = 1
Query: 1 PSLSFHHKKNRVDFALDHM--SRDRR-TFKTGNNTIHVDESWFYLIRDKEKVRMFPGEEKVGSIKVP-----HKSHIPKLMFICAVSRPDPAHDFDGKIGIWRVCVIKEAQRTTARRARGEEYEVDVTIDAECYQSWYLEDLLSAVKSKMWWLEGEDA--------IVQQDGGTPHTGKDTPKTLNRAGREGG*CIKLVTQPAQSPDFNINDLGFFASPKSRVCGERFGTVDALVEGVKSMYNAYDAETLERVWQSLFKRYNQVLKAKGEDDFEVGHTGTNKRQREGRL 819
P L+ HK +R+ + L H+ S DR+ F +T+HVDE WFY+ + +KV + G++ P K HI K+MF+CAV+RP ++DGK+G+W V QR + R G E +++ E Y+ LED++ A+K+K W+ E VQQD PH D P+ L AG GG I QPAQSPD N+ D GFF + +S T + L+ V+ + + TL + + S+ +++ G + F + H +K R G L
Sbjct: 20 PLLTEKHKTDRLKWCLLHVTQSTDRQPVFAPMYDTVHVDEKWFYVKKIGQKVYLLTGQDGTPCEDAPVQFVQSKRHILKVMFLCAVARP--RGNWDGKVGMWPVVEKYVTQRRSVNRDAGVEELRPISMTREVYRRMLLEDVIPAIKAKWEWVRDEGLGVPLVSPIWVQQDNAKPHVLPDDPEVLV-AGCAGGWSILFRNQPAQSPDLNVLDCGFFNAIQSLQSVTVPRTAEDLISEVERAFASTTTTTLNKTFLSVQLIMQSIMRHNGGNAFGLSHIQKDKLLRAGEL 305
BLAST of mRNA_H-paniculata_contig15561.3246.1 vs. uniprot
Match: A0A6G0X8U9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8U9_9STRA) HSP 1 Score: 138 bits (347), Expect = 6.340e-34 Identity = 85/248 (34.27%), Postives = 133/248 (53.63%), Query Frame = 1
Query: 97 IHVDESWFYLIRDKEKVRMFPGEEKVGSIKVPHKSHIPKLMFICAVSRPDPAHD----FDGKIGIWRVCVIKEAQRTTARRARGEEYEVDVTIDAECYQSWYLEDLLSAVKSKM---WWLEGEDAIVQQDGGTPHTGKDTPKTLNRAGREGG*CIKLVTQPAQSPDFNINDLGFFASPKSRVCGERFGTVDALVEGVKSMYNAYDAETLERVWQSLFKRYNQVLKAKGEDDFEVGHTGTNKRQREGRL 819
IH+DE WF+L +DK + GEE + S HKSHIPKLMF+ AV RP H FDGK+GI+ + A+R++ +A+G + T+ + Y + +L A+ +K W + +QQDG PH P+ + A G IKLVTQPA SPD NI DLGFFA+ ++ + T+D ++ V ++ ++ L+ VW SL +R ++ G++ ++ H +++G+L
Sbjct: 153 IHLDEKWFFLDKDKRTFYLVKGEE-LPSRTARHKSHIPKLMFLTAVGRPQYDHGTSQYFDGKLGIFPFVIHGTAKRSSRHQAKGAPVLIPQTVTRDIYVDALVNHVLPAILTKFPSRW----KTLYIQQDGARPHCTDGCPELVASAASF-GLNIKLVTQPANSPDLNILDLGFFAAIQTLQYRKCPKTIDEFLDAVHESFHELKSDCLDSVWLSLHRRMATIIDHYGDNTMKLEHMRKEALRKQGKL 394
BLAST of mRNA_H-paniculata_contig15561.3246.1 vs. uniprot
Match: UPI002008F034 (uncharacterized protein LOC125206616 n=4 Tax=Salvia TaxID=21880 RepID=UPI002008F034) HSP 1 Score: 137 bits (344), Expect = 9.140e-34 Identity = 93/279 (33.33%), Postives = 146/279 (52.33%), Query Frame = 1
Query: 1 PSLSFHHKKNRVDFALDHM----SRDRRTFKTGNNTIHVDESWFYLIRDKEKVRMFPGE-EKVGSIKVPHKSHIPKLMFICAVSRP----DPAHDFDGKIGIWRVCVIKEAQRTTARRARGE-EYEVDVTIDAECYQSWYLEDLLSAVKSKMWWLEGEDAIVQQDGGTPHTGKDTPKTLNRAGREGG*CIKLVTQPAQSPDFNINDLGFFASPKSRVCGERFGTVDALVEGVKSMYNAYDAETLERVWQSLFKRYNQVLKAKGEDDFEVGHTGTNKRQR 807
PSL+ +K RV ++L + ++ R +++ +N +H+DE WFY+ + ++ + P E E S K K +I K+MF+CAVSRP D +DGK+GI+ + AQR + R RG E + ++ E + + ++ A+K+K +D +QQD TPH P A G I+L+ QPA SPD NI DLGFF + +S + TVD LV V S + +TL RV+ SL ++L +G + ++V H ++ QR
Sbjct: 133 PSLTNINKLARVRWSLSQLQPQITQGRVQYQSMHNVVHIDEKWFYMTKASDRYYLLPDEDEPYRSCK--SKRYITKVMFMCAVSRPHFGMDGQATYDGKVGIFPFTEVLPAQRKSKNRPRGTMETKAIHSVTKEVMRDCLINKIIPAIKAKWPVWASKDIYIQQDNATPHITAMDPD-FQAAANSDGFKIQLICQPANSPDTNILDLGFFRAIQSLQYEKPCKTVDELVGNVCSSFAELSPQTLNRVFLSLQACLTEILLCRGGNGYKVPHINKDRLQR 408 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15561.3246.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15561.3246.1 >prot_H-paniculata_contig15561.3246.1 ID=prot_H-paniculata_contig15561.3246.1|Name=mRNA_H-paniculata_contig15561.3246.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=160bp MSRDRRTFKTGNNTIHVDESWFYLIRDKEKVRMFPGEEKVGSIKVPHKSHback to top mRNA from alignment at H-paniculata_contig15561:593..1423- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15561.3246.1 ID=mRNA_H-paniculata_contig15561.3246.1|Name=mRNA_H-paniculata_contig15561.3246.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=831bp|location=Sequence derived from alignment at H-paniculata_contig15561:593..1423- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15561:593..1423- >mRNA_H-paniculata_contig15561.3246.1 ID=mRNA_H-paniculata_contig15561.3246.1|Name=mRNA_H-paniculata_contig15561.3246.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=960bp|location=Sequence derived from alignment at H-paniculata_contig15561:593..1423- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |