mRNA_H-paniculata_contig15436.3183.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig15436.3183.1
Unique NamemRNA_H-paniculata_contig15436.3183.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig15436.3183.1 vs. uniprot
Match: D8LT45_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT45_ECTSI)

HSP 1 Score: 338 bits (867), Expect = 9.970e-115
Identity = 161/202 (79.70%), Postives = 179/202 (88.61%), Query Frame = 1
Query:    1 LQVFSKGDEYRTTLEDGTMISGWDTGLAGLRPGDRAIIRCTSRYGYGNEGVTPIIPPNANLIFDVELVENEGNIMNPATFVDANPLTPRSPQSIAAAFDIRNKRKMESMADEGELEGLDKAIAWIKGIYIFGLFEGETGQEAPWYLKPLITFPIMIAICGVAFYVVLLFNGISTERSAGVQDDPMLASLGAEALRQLNEMIA 606
            L+VFSKGDEY TTLEDGTMISGWDTGLAGLR GDRA+I+CTSRYGYG EGVTPI+PPNANL+FDVEL+ENEGNIMNPATFVDANPLTPR+P +IA AFD +++RK  + AD  ELEGLDK IAW K IYIFGLFEGETG+EAPWYLKPLITFPIMI ICGVAFY VLL  G++T+R  GVQDDPMLASLGA ALRQ+ E +A
Sbjct:    3 LKVFSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTSRYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALAAADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQDDPMLASLGAYALRQMGEALA 204          
BLAST of mRNA_H-paniculata_contig15436.3183.1 vs. uniprot
Match: A0A6H5JSZ6_9PHAE (Peptidylprolyl isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSZ6_9PHAE)

HSP 1 Score: 336 bits (862), Expect = 2.750e-112
Identity = 160/200 (80.00%), Postives = 177/200 (88.50%), Query Frame = 1
Query:    7 VFSKGDEYRTTLEDGTMISGWDTGLAGLRPGDRAIIRCTSRYGYGNEGVTPIIPPNANLIFDVELVENEGNIMNPATFVDANPLTPRSPQSIAAAFDIRNKRKMESMADEGELEGLDKAIAWIKGIYIFGLFEGETGQEAPWYLKPLITFPIMIAICGVAFYVVLLFNGISTERSAGVQDDPMLASLGAEALRQLNEMIA 606
            VFSKGDEY TTLEDGTMISGWDTGLAGLR GDRA+I+CTSRYGYG EGVTPI+PPNANL+FDVEL+ENEGNIMNPATFVDANPLTPR+P +IA AFD +++RK  + AD  ELEGLDK IAW K IYIFGLFEGETG+EAPWYLKPLITFPIMI ICGVAFY VLL  G++T+R  GVQDDPMLASLGA ALRQ+ E +A
Sbjct:  117 VFSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTSRYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALAAADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQDDPMLASLGAYALRQMGEALA 316          
BLAST of mRNA_H-paniculata_contig15436.3183.1 vs. uniprot
Match: A0A7S2UWP8_9STRA (Peptidylprolyl isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWP8_9STRA)

HSP 1 Score: 186 bits (472), Expect = 1.180e-53
Identity = 91/190 (47.89%), Postives = 126/190 (66.32%), Query Frame = 1
Query:    4 QVFSKGDEYRTTLEDGTMISGWDTGLAGLRPGDRAIIRCTSRYGYGNEGVTPIIPPNANLIFDVELVENEGNIMNPATFVDANPLTPRSPQSIAAAFDIRNKRKMESMADEGELEGLDKAIAWIKGIYIFGLF-EGETGQEAPWYLKPLITFPIMIAICGVAFYVVLLFNGISTERSA-GVQDDPMLASL 567
            + F+ G+EYRTT+ DGTMI GWD  L  ++ G++A I     Y YG EGV P+I PN+ +  ++E++  EGNI+NPATF D NPLTPR+PQ+I AAF+   +R+    A+   LEG  K   W + +Y FGLF EG+TG++ P  L P ITFP +  + GVAFY+V +  G+ TER+A  V DD  L+S+
Sbjct:  101 KTFAAGEEYRTTVRDGTMIQGWDIALESMKIGEKAKISLAPEYAYGEEGVAPVIEPNSPVDIELEVLAYEGNILNPATFADNNPLTPRTPQAITAAFESTARRQAREEAELEGLEGFAKFEKWYRSLYFFGLFGEGQTGEKPPILLNPFITFPAIFLVVGVAFYIVFVSGGVITERAAESVLDDASLSSI 290          
BLAST of mRNA_H-paniculata_contig15436.3183.1 vs. uniprot
Match: A0A7S2I8Q8_9STRA (Peptidylprolyl isomerase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I8Q8_9STRA)

HSP 1 Score: 158 bits (399), Expect = 7.610e-43
Identity = 81/182 (44.51%), Postives = 113/182 (62.09%), Query Frame = 1
Query:   10 FSKGDEYRTTLEDGTMISGWDTGLAGLRPGDRAIIRCT--SRYGYGNEGVTPIIPPNANLIFDVELVENEGNIMNPATFVDANPLTPRSPQSIAAAFDIRNKRKMESMADEGELEGLDKAIAWIKGIYIFGLFEGETGQEAPWYLKPLITFPIMIAICGVAFYVVLLFNGISTERSAGVQDD 549
            FSK D+ R  + DG MI GW+  L  +  G+RA IR +  +++GYG  GV PI+PPNA +  D+E++  E  +   A F +  PLTPR+P++I AA++ R + K++   +    EGL   I      Y FG FEGETGQ+APW+L+P ITFP+  A+ G AFY+ L F  IS ER A V D+
Sbjct:   88 FSKSDKQRMIVGDGQMIEGWELALLSMNVGERATIRISDPNKFGYGEAGVPPIVPPNAPIEMDMEILGAEERLEMGA-FANNEPLTPRTPKAIRAAYEARKEAKIQDAIENPPAEGLQAWIEKFNSFYFFGFFEGETGQQAPWFLRPSITFPLAFAVVGAAFYISLKFGAIS-ERGAQVTDE 267          
BLAST of mRNA_H-paniculata_contig15436.3183.1 vs. uniprot
Match: A0A7S4QU46_9STRA (Peptidylprolyl isomerase n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QU46_9STRA)

HSP 1 Score: 153 bits (387), Expect = 4.220e-41
Identity = 81/182 (44.51%), Postives = 113/182 (62.09%), Query Frame = 1
Query:   10 FSKGDEYRTTLEDGTMISGWDTGLAGLRPGDRAIIRC--TSRYGYGNEGVTPIIPPNANLIFDVELVENEGNIMNPATFVDANPLTPRSPQSIAAAFDIRNKRKMESMADEGELEGLDKAIAWIKGIYIFGLFEGETGQEAPWYLKPLITFPIMIAICGVAFYVVLLFNGISTERSAGVQDD 549
            F++ ++ R  + DG MI GW+  L  +  G+RA +R    +++GYG  GV PI+P NA +  ++E++  E  +   A F +  PLTPR+P++I AA++ R   K++   +   LEGLD     IK  Y FG FEGETGQ+APW+L+P ITFPI  AI G AFYV L F  IS ER A V D+
Sbjct:   85 FAQSEKQRMIVGDGQMIEGWELALLTMNVGERATVRIDDAAKFGYGEAGVPPIVPSNAPIEMEMEILSAEERLEMGA-FANNEPLTPRTPKAIRAAYEARQSAKLQDEIENPPLEGLDYWKDKIKSYYFFGFFEGETGQQAPWFLRPSITFPIAFAIVGAAFYVSLKFGAIS-ERGAQVTDE 264          
BLAST of mRNA_H-paniculata_contig15436.3183.1 vs. uniprot
Match: A0A7S0CD00_9STRA (Peptidylprolyl isomerase n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CD00_9STRA)

HSP 1 Score: 149 bits (377), Expect = 1.400e-39
Identity = 81/181 (44.75%), Postives = 112/181 (61.88%), Query Frame = 1
Query:   10 FSKGDEYRTTLEDGTMISGWDTGLAGLRPGDRAIIRCTS-RYGYGNEGVTPIIPPNANLIFDVELVENEGNIMNPATFVDANPLTPRSPQSIAAAFDIRNKRKMESMADEGELEGLDKAIAWIKGIYIFGLFEGETGQEAPWYLKPLITFPIMIAICGVAFYVVLLFNGISTERSAGVQDD 549
            F+K +  +  + +G MI GW+ GL  +R G+R++IR +  RYGYG  GV+P+IPPNA +  D+++   E  + +  T   A+PL PR+P SIAAA++ R ++      +E + EGLD  I  IKG Y FG FEGETG++ PWYL P ITFPI  A+ G AF  V L  G   ER   V D+
Sbjct:   91 FAKSNAEKMIVGEGLMIDGWEFGLQSMRQGERSVIRVSDPRYGYGISGVSPLIPPNAEIEMDIQVSLVEAGV-DLGTIASADPLKPRTPASIAAAYNTRREQAALDALNETD-EGLDYWIKKIKGYYFFGFFEGETGEKPPWYLTPSITFPIAFAVVGAAF-AVSLAGGAIKERGVQVTDE 268          
BLAST of mRNA_H-paniculata_contig15436.3183.1 vs. uniprot
Match: A0A7S1D6P4_CYCTE (Peptidylprolyl isomerase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D6P4_CYCTE)

HSP 1 Score: 138 bits (348), Expect = 2.010e-35
Identity = 77/181 (42.54%), Postives = 104/181 (57.46%), Query Frame = 1
Query:   10 FSKGDEYRTTLEDGTMISGWDTGLAGLRPGDRAIIRCTS-RYGYGNEGVTPIIPPNANLIFDVELVENEGNIMNPATFVDANPLTPRSPQSIAAAFDIRNKRKMESMADEGELEGLDKAIAWIKGIYIFGLFEGETGQEAPWYLKPLITFPIMIAICGVAFYVVLLFNGISTERSAGVQDD 549
            FS+ +  +  + DG+MI GWD  L  +  G+RA++R      GYG  G  P+IPPNA +  DVE++++E         +  +P TPR+   IAAA+D   +   E      + EGL+  +   K  Y FGLFEGETGQEAPWYLKP ITFP+   I G  FYV ++  G  TER A V D+
Sbjct:   82 FSRSERQQMIVGDGSMIDGWDIVLQSMTIGERAVVRIKDPELGYGAAGFPPLIPPNAEIEIDVEVLDSERQRSLNLDEIMLDPSTPRTAADIAAAYD---RLLAEKALQPPKKEGLEGFLEEAKNWYFFGLFEGETGQEAPWYLKPSITFPLAFLIVGATFYVCVI-GGAITERGAQVTDE 258          
BLAST of mRNA_H-paniculata_contig15436.3183.1 vs. uniprot
Match: A0A7S1GGZ7_9STRA (Peptidylprolyl isomerase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1GGZ7_9STRA)

HSP 1 Score: 138 bits (348), Expect = 2.380e-35
Identity = 80/189 (42.33%), Postives = 110/189 (58.20%), Query Frame = 1
Query:    7 VFSKGDEYRTTLEDGTMISGWDTGLAGLRPGDRAIIRCTS-RYGYGNEGVTPIIPPNANLIFDVELV---ENEGNIMNPATF----VDANPLTPRSPQSIAAAFDIRNKRKMESMADEGELEGLDKAIAWIKGIYIFGLFEGETGQEAPWYLKPLITFPIMIAICGVAFYVVLLFNGISTERSAGVQDD 549
             FS+ D  R    DG MI G+D  +  ++ G+RA +R +  +YGYG  GV P +PP A L  D+E++   E+ G   +PA      +D     PR+P +IAAA++ R K+K  +M +  E EG++  +  +K  Y FGLFEGETGQEAPWYLKP ITFPI   + G AF+  L    IS ER     D+
Sbjct:   83 AFSRSDRQRFVAGDGIMIPGFDVAIRSMKEGERASVRISDPKYGYGEAGVPPFVPPMAQLELDLEVLNIEESVGLSADPAEMGALGMDGPINRPRTPAAIAAAYEQRMKQK--AMNEPEEKEGIEWVVDKVKNSYFFGLFEGETGQEAPWYLKPSITFPIAFLVVGAAFWASLAGGAIS-ERGMPTTDE 268          
BLAST of mRNA_H-paniculata_contig15436.3183.1 vs. uniprot
Match: A0A7S2DQU6_9STRA (Peptidylprolyl isomerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DQU6_9STRA)

HSP 1 Score: 138 bits (347), Expect = 3.930e-35
Identity = 76/194 (39.18%), Postives = 111/194 (57.22%), Query Frame = 1
Query:    7 VFSKGDEYRTTLEDGTMISGWDTGLAGLRPGDRAIIRCTSRYGYGNEGVTPIIPPNANLIFDVELVENEGNIMNPATFVDANPLTPRSPQSIAAAFDIRNKRKMESMADEGELEGLDKAIAWIKGIYIFGLFEGETGQEA-----PWYLKPLITFPIMIAICGVAFYVVLLFNGISTERSAGVQDDPMLASLGA 573
            VF   +    T+   + I GW+  L  +R G+ A     S YGYG+ G+ P+IPPN  L F+VE+ + +GNI+  +TF D +PL PR+P +I A ++ R   K          EG++  IAW K IY+FGLF GET + A      WYL+P+ITFP M+AI GV F++V +   I+  R     D+ +L ++ A
Sbjct:  107 VFGDSNGIMVTVGSDSAIDGWNAALRTMRTGEVAEFSVASNYGYGSSGIKPVIPPNTPLHFEVEIQDYKGNILLDSTFEDNSPLIPRTPATIKAEYERRQAEKAVKK------EGIEGFIAWAKNIYVFGLF-GETIETARPEDLAWYLRPVITFPAMVAIVGVTFWLVAISGSITLIREVTDVDNYLLDTVTA 293          
BLAST of mRNA_H-paniculata_contig15436.3183.1 vs. uniprot
Match: B7G149_PHATC (Peptidylprolyl isomerase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G149_PHATC)

HSP 1 Score: 137 bits (344), Expect = 1.820e-34
Identity = 78/187 (41.71%), Postives = 114/187 (60.96%), Query Frame = 1
Query:   10 FSKGDEYRTTLEDGTMISGWDTGLAGLRPGDRAIIRCTS-RYGYGNEGVTPIIPPNANLIFDVELVENEGNIMNPATF-VDANPL-----TPRSPQSIAAAFDIRNKRKMESMADEGELEGLDKAIAWIKGIYIFGLFEGETGQEAPWYLKPLITFPIMIAICGVAFYVVLLFNGISTERSAGVQDD 549
            F++    +  + DG+MI GW+  L  +R G+R+I+R T  + GYG +GV P++PPNA L  D+ +++     + PAT  +D + L     TPR+   I+AAF+ R   + E +    ELEGL+  IA  +  Y FGLFEGETG+ APW+L+P ITFP+   I G AFYV  +   IS ER A ++D+
Sbjct:  110 FARALSQKVVVGDGSMIVGWEKALRSMRVGERSIVRITDPQLGYGAQGVVPVVPPNAVLELDLNVLD-----VQPATTNIDFDTLAMADTTPRTASEISAAFEARQAARGEVV----ELEGLEYWIAKARNFYFFGLFEGETGERAPWFLRPSITFPLAFLIVGAAFYVSFIGGAIS-ERGAQIKDE 286          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15436.3183.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LT45_ECTSI9.970e-11579.70Peptidylprolyl isomerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JSZ6_9PHAE2.750e-11280.00Peptidylprolyl isomerase n=1 Tax=Ectocarpus sp. CC... [more]
A0A7S2UWP8_9STRA1.180e-5347.89Peptidylprolyl isomerase n=1 Tax=Fibrocapsa japoni... [more]
A0A7S2I8Q8_9STRA7.610e-4344.51Peptidylprolyl isomerase n=1 Tax=Helicotheca tames... [more]
A0A7S4QU46_9STRA4.220e-4144.51Peptidylprolyl isomerase n=3 Tax=Ditylum brightwel... [more]
A0A7S0CD00_9STRA1.400e-3944.75Peptidylprolyl isomerase n=2 Tax=Proboscia inermis... [more]
A0A7S1D6P4_CYCTE2.010e-3542.54Peptidylprolyl isomerase n=1 Tax=Cyclophora tenuis... [more]
A0A7S1GGZ7_9STRA2.380e-3542.33Peptidylprolyl isomerase n=1 Tax=Skeletonema marin... [more]
A0A7S2DQU6_9STRA3.930e-3539.18Peptidylprolyl isomerase n=1 Tax=Dictyocha speculu... [more]
B7G149_PHATC1.820e-3441.71Peptidylprolyl isomerase n=2 Tax=Phaeodactylum tri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15436contigH-paniculata_contig15436:2555..5918 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score306.6
Seed ortholog evalue7.9e-81
Seed eggNOG ortholog2880.D8LT45
KEGG koko:K09568
Hectar predicted targeting categoryother localisation
GOsGO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005527,GO:0005528,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006457,GO:0006464,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0061077,GO:0071704,GO:0097159,GO:0140096,GO:1901363,GO:1901564
EggNOG free text desc.Peptidyl-prolyl cis-trans isomerase
EggNOG OGsCOG0545@1,KOG0544@2759
Ec32 ortholog descriptionFKBP domain protein
Ec32 orthologEc-08_004100.1
EC5.2.1.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03110
Exons4
Model size917
Cds size555
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15436.3183.1prot_H-paniculata_contig15436.3183.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig15436 2863..5864 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929235.657825-UTR-H-paniculata_contig15436:2554..28621622929235.657825-UTR-H-paniculata_contig15436:2554..2862Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15436 2555..2862 -
1691480781.6343987-UTR-H-paniculata_contig15436:2554..28621691480781.6343987-UTR-H-paniculata_contig15436:2554..2862Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15436 2555..2862 -
1622929235.738241-UTR-H-paniculata_contig15436:5864..59181622929235.738241-UTR-H-paniculata_contig15436:5864..5918Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15436 5865..5918 -
1691480781.68349-UTR-H-paniculata_contig15436:5864..59181691480781.68349-UTR-H-paniculata_contig15436:5864..5918Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig15436 5865..5918 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929235.6751437-CDS-H-paniculata_contig15436:2862..30271622929235.6751437-CDS-H-paniculata_contig15436:2862..3027Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15436 2863..3027 -
1691480781.647017-CDS-H-paniculata_contig15436:2862..30271691480781.647017-CDS-H-paniculata_contig15436:2862..3027Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15436 2863..3027 -
1622929235.6912966-CDS-H-paniculata_contig15436:4124..42471622929235.6912966-CDS-H-paniculata_contig15436:4124..4247Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15436 4125..4247 -
1691480781.655993-CDS-H-paniculata_contig15436:4124..42471691480781.655993-CDS-H-paniculata_contig15436:4124..4247Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15436 4125..4247 -
1622929235.708204-CDS-H-paniculata_contig15436:5039..52441622929235.708204-CDS-H-paniculata_contig15436:5039..5244Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15436 5040..5244 -
1691480781.665003-CDS-H-paniculata_contig15436:5039..52441691480781.665003-CDS-H-paniculata_contig15436:5039..5244Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15436 5040..5244 -
1622929235.7257385-CDS-H-paniculata_contig15436:5802..58641622929235.7257385-CDS-H-paniculata_contig15436:5802..5864Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15436 5803..5864 -
1691480781.6740487-CDS-H-paniculata_contig15436:5802..58641691480781.6740487-CDS-H-paniculata_contig15436:5802..5864Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig15436 5803..5864 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig15436.3183.1

>prot_H-paniculata_contig15436.3183.1 ID=prot_H-paniculata_contig15436.3183.1|Name=mRNA_H-paniculata_contig15436.3183.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=185bp
MISGWDTGLAGLRPGDRAIIRCTSRYGYGNEGVTPIIPPNANLIFDVELV
ENEGNIMNPATFVDANPLTPRSPQSIAAAFDIRNKRKMESMADEGELEGL
DKAIAWIKGIYIFGLFEGETGQEAPWYLKPLITFPIMIAICGVAFYVVLL
FNGISTERSAGVQDDPMLASLGAEALRQLNEMIA*
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mRNA from alignment at H-paniculata_contig15436:2555..5918-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig15436.3183.1 ID=mRNA_H-paniculata_contig15436.3183.1|Name=mRNA_H-paniculata_contig15436.3183.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3364bp|location=Sequence derived from alignment at H-paniculata_contig15436:2555..5918- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTACAGGTGTTCTCCAAGGGAGACGAGTACCGGACTACGCTGGAGGATGG GACAATGATCAGCGGATGGGACACCGGACTGGCGGGACTGAGGCCAGGAG ACCGCGCGATAATCAGGTCTGTGCCGGTGGGCAAGTACAGTTTGAAACCT GAAGATGTTTTATATAGTTTTTAGTTTTTCATGAATATTTCTTTCGTGGG GGGGGGGGGCTGTGGATACGTCTCCCATTTTCACACAGGCACCATATCAG GGAGAAGAAATAGAGACAGCCAGAGACAGATAGAGAGAAAGGGACTTTGG ATGGGGTGTTGAGAAAATGTTTTTCTTTTGTGTGTGTGTGTATGTGTATG TGTATGTGTATGTGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTG TACTTTTGCGTTTGCTCTTTCCATTTCTCTTTGTTGCTTTTCCCGCTCTT CTTCTCTTTGTTTAATTTAATTGTATTTTTTTTCTGCCGTGTCTCATTTT AAATCGTTTTCTCTTATCTTTCCTTGTTGTTGTTGTTGGTGGTGGTGGTA GTGGTGGCAGTGGTGGTGTTGTCGCTCTCTGTTTTTTTCGCCTTTTTTTT TATCATCGAGTTGATAAAAAGCAGAGCTTCTCTCTTCCTTTTTTTTTTTT TTTGCTAAATACATTCTTTAAAAGGTGCACCTCACGCTACGGGTACGGCA ACGAAGGAGTGACCCCGATCATTCCCCCGAATGCCAATCTGATCTTCGAT GTGGAGCTGGTGGAGAACGAGGGCAACATCATGAACCCCGCTACCTTCGT GGACGCGAACCCCTTGACACCTCGCAGCCCGCAGAGCATCGCCGCCGCTT TTGACATAAGAAATAAGCGGAAGATGGAGGTGAAAAATATTGCGATCGAT GCTTCATGGATTCTTGGCTGCTGCTGCTGCTGCTGCTGCTATAGTTATTC ATTGTGTTTATCATGATCCAATGCTGCTGGTGTTGTTGTACCACCGCGTT ATACAGTCTGACTGCGCTCAGTCAGCATGCCCAAAGCTGTCCGATATTTG TGCAAAATGCATCTCTTGTAACGCAGGGCCTTCCAAAATATATCTATATC TATATCTATATCTATATATATATATATATATATCGGTTGGTTGGTTGGTT GCTGAATGATTTGCAAATGGAGTAGTTTGTTGTTTAGATGTCCTCCGCCG GGGGGTAATGAGTACCGAAATGTCGTCACACAGTACAGTACAGTACAGTA CAGTACAGTACAGTACAGTACAGTACAGTAAAGTACGGTACGGTACGGTA CCACTGTACTGCCCATTATTTCTGGGGCTCAATGCAGTATTTTGGACTTG ATGAAAAATTGATTCGAAAATACGGGGTACTCGGCTAGCTAGCTCCCTTG TACAAATATACCTGCTTCGTTCCCTACTTCCTAATGTACAACATACTGAA TCCAGTCCACGACACTGACTGTTTAATGATACTAGCTGTTCTGACTGTGC TGTGACAACCTATGCAAGTTTTAAGACAAGTCAAGAGTCATGACCCCCCC CCCCCTACCCTCGCCCTCCTCACGTTTTGTTTTGTTGACGGGTGCCGTTT CTTTTGCTGATATTTTCTTATATATATACATATTGTCTTATTGTATCCTG CCCGCTTTTGTTGTCCTACAGTCGATGGCCGACGAGGGAGAGCTGGAAGG TCTCGACAAAGCGATCGCGTGGATCAAGGGCATCTACATCTTTGGGCTGT TCGAGGGAGAGACTGGCCAAGAAGCTCCTTGGTACCTCAAGCCGGTAATA AATATATATAATTTGAATATTGGCGCGCGCGGGGGGGGGGGGGGCTGCTG GTTATGCAGCTGACTTCAATCTGTAGTTGTATACACTTATTATCAGCAAA ATTTCATCAACCATGGGGGGGGGGTCGATGCTGTGACCGGAATTCATGGC ACATGGCACATGGTAACGTTGGAAATAACCAGAAATATTTATCTTGCGTC CTGAAGGAGTTTACTAGTAATAATCAGCCAGTCACCTGCGAGTTTTACTG TAAAGATTCAATCTGTGGCGTGTTTTATTAAACTTGTTTCTTTCGTACGT GAAGAATCAAAAACGCTTAATGGTCGTTTTAGATGCGAGTGAAAGGGTTA CATACTCTCTGGTAGGAGGGGTAGATTACAGATTTAACTTGAATTTTAGT GTTGATTTTATTTAACTTAATTCAACAGTCAAACCTTGATTGCTGTCCTC GTTTCAAGCTGTCGTACCCATGAGTTCTGGTACTCGGTCGTGGACAGGAT GCGTTACCGATCGCGTAGAAGATGTGTGTGCTACATGATACTAAATTCCT TCGAGGGCAGTGCGTTCTCATGTGGTCGTCGTACTTGAGGGAAGCAATCC ATGCCCCGAAGTTGTTTTCGTGATTTTCCTGTCGATCATAAACAGCTATA TGAAGTAAAACCCCGATTTTTTTGGTTCGGCCGAACCGCGGTGGCGCCTA CCCCGCAGAGGAATAAATAACTCTGTTCTGTTAAAGGAAATGTAGACATA CTTTGGTAAAATACCTGAAGTGTGGAAGCATCGGAAAAGGTTTTTGCCTC AGCCTTCCGGGCGTTAAAATCTACGTGAGTAGTACAATCAAGTTATCATG GGAGATTCAGAGTTAAATAATTTAAGTGACTGGCAAAATGACTTTTACTA CAAAAATGAGAATTTCTGTTAGCAAAATGAAGGGTCATTTTCAATTTTGA TATCATCAGTCCTTTATATGAGGACTATTTCATGTTTAACCTGCAGTACA CGTGCGAATGATAGAGTGCTCCCTCCCCCCCCCCTCCCGACCTCTGCAAT GCAATTTGTGTTATGGTCCGGCGTGTACCGCATCTGGGCAGCTCATCACC TTCCCCATCATGATCGCGATATGCGGCGTGGCGTTCTACGTAGTGCTCCT TTTCAACGGCATCTCCACGGAAAGAAGCGCGGGGGTGCAAGATGACCCCA TGCTGGCTTCTCTGGGTGCCGAGGCGCTTCGACAATTGAATGAAATGATT GCTTGATTTAGATTTTACTGTATGGATTTTCGTGGGTATGTTTTTTTTTG TCATTTTTTTTATTTTTTTTTAATATATCTTGCAATTACTTGGTGGCAAG TACAATTGACATGATATTGCGCGTGCTGTGCACGAGTATGCTGTGTACGG CAATCGAATGAAGGAATAAAGGAATAAAGATATGGATTTCTTGCTGCAAC TGGTGTCGGTCAGCTCAGCTTCGCTTCTGTCTTGATTTTTTTTTCTTTTT TTTTTTCTAACATTCGTAACAACAGGCCACTTCAAAAAACGAAGAGAATA GTTTTTGTTTTCTA
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Coding sequence (CDS) from alignment at H-paniculata_contig15436:2555..5918-

>mRNA_H-paniculata_contig15436.3183.1 ID=mRNA_H-paniculata_contig15436.3183.1|Name=mRNA_H-paniculata_contig15436.3183.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1110bp|location=Sequence derived from alignment at H-paniculata_contig15436:2555..5918- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATCAGCGGATGGGACACCGGACTGGCGGGACTGAGGCCAGGAGACCG
CGCGATAATCAGATGATCAGCGGATGGGACACCGGACTGGCGGGACTGAG
GCCAGGAGACCGCGCGATAATCAGGTGCACCTCACGCTACGGGTACGGCA
ACGAAGGAGTGACCCCGATCATTCCCCCGAATGCCAATCTGATCTTCGAT
GTGGAGCTGGTGGAGAACGAGGGCAACATCATGAACCCCGCTACCTTCGT
GGACGCGAACCCCTTGACACCTCGCAGCCCGCAGAGCATCGCCGCCGCTT
TTGACATAAGAAATAAGCGGAAGATGGAGGTGCACCTCACGCTACGGGTA
CGGCAACGAAGGAGTGACCCCGATCATTCCCCCGAATGCCAATCTGATCT
TCGATGTGGAGCTGGTGGAGAACGAGGGCAACATCATGAACCCCGCTACC
TTCGTGGACGCGAACCCCTTGACACCTCGCAGCCCGCAGAGCATCGCCGC
CGCTTTTGACATAAGAAATAAGCGGAAGATGGAGTCGATGGCCGACGAGG
GAGAGCTGGAAGGTCTCGACAAAGCGATCGCGTGGATCAAGGGCATCTAC
ATCTTTGGGCTGTTCGAGGGAGAGACTGGCCAAGAAGCTCCTTGGTACCT
CAAGCCGTCGATGGCCGACGAGGGAGAGCTGGAAGGTCTCGACAAAGCGA
TCGCGTGGATCAAGGGCATCTACATCTTTGGGCTGTTCGAGGGAGAGACT
GGCCAAGAAGCTCCTTGGTACCTCAAGCCGCTCATCACCTTCCCCATCAT
GATCGCGATATGCGGCGTGGCGTTCTACGTAGTGCTCCTTTTCAACGGCA
TCTCCACGGAAAGAAGCGCGGGGGTGCAAGATGACCCCATGCTGGCTTCT
CTGGGTGCCGAGGCGCTTCGACAATTGAATGAAATGATTGCTTGACTCAT
CACCTTCCCCATCATGATCGCGATATGCGGCGTGGCGTTCTACGTAGTGC
TCCTTTTCAACGGCATCTCCACGGAAAGAAGCGCGGGGGTGCAAGATGAC
CCCATGCTGGCTTCTCTGGGTGCCGAGGCGCTTCGACAATTGAATGAAAT
GATTGCTTGA
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