mRNA_H-paniculata_contig15436.3183.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig15436.3183.1 vs. uniprot
Match: D8LT45_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT45_ECTSI) HSP 1 Score: 338 bits (867), Expect = 9.970e-115 Identity = 161/202 (79.70%), Postives = 179/202 (88.61%), Query Frame = 1
Query: 1 LQVFSKGDEYRTTLEDGTMISGWDTGLAGLRPGDRAIIRCTSRYGYGNEGVTPIIPPNANLIFDVELVENEGNIMNPATFVDANPLTPRSPQSIAAAFDIRNKRKMESMADEGELEGLDKAIAWIKGIYIFGLFEGETGQEAPWYLKPLITFPIMIAICGVAFYVVLLFNGISTERSAGVQDDPMLASLGAEALRQLNEMIA 606
L+VFSKGDEY TTLEDGTMISGWDTGLAGLR GDRA+I+CTSRYGYG EGVTPI+PPNANL+FDVEL+ENEGNIMNPATFVDANPLTPR+P +IA AFD +++RK + AD ELEGLDK IAW K IYIFGLFEGETG+EAPWYLKPLITFPIMI ICGVAFY VLL G++T+R GVQDDPMLASLGA ALRQ+ E +A
Sbjct: 3 LKVFSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTSRYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALAAADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQDDPMLASLGAYALRQMGEALA 204
BLAST of mRNA_H-paniculata_contig15436.3183.1 vs. uniprot
Match: A0A6H5JSZ6_9PHAE (Peptidylprolyl isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSZ6_9PHAE) HSP 1 Score: 336 bits (862), Expect = 2.750e-112 Identity = 160/200 (80.00%), Postives = 177/200 (88.50%), Query Frame = 1
Query: 7 VFSKGDEYRTTLEDGTMISGWDTGLAGLRPGDRAIIRCTSRYGYGNEGVTPIIPPNANLIFDVELVENEGNIMNPATFVDANPLTPRSPQSIAAAFDIRNKRKMESMADEGELEGLDKAIAWIKGIYIFGLFEGETGQEAPWYLKPLITFPIMIAICGVAFYVVLLFNGISTERSAGVQDDPMLASLGAEALRQLNEMIA 606
VFSKGDEY TTLEDGTMISGWDTGLAGLR GDRA+I+CTSRYGYG EGVTPI+PPNANL+FDVEL+ENEGNIMNPATFVDANPLTPR+P +IA AFD +++RK + AD ELEGLDK IAW K IYIFGLFEGETG+EAPWYLKPLITFPIMI ICGVAFY VLL G++T+R GVQDDPMLASLGA ALRQ+ E +A
Sbjct: 117 VFSKGDEYLTTLEDGTMISGWDTGLAGLRKGDRALIKCTSRYGYGAEGVTPIVPPNANLVFDVELLENEGNIMNPATFVDANPLTPRTPDTIAEAFDSKSRRKALAAADVDELEGLDKVIAWAKNIYIFGLFEGETGEEAPWYLKPLITFPIMITICGVAFYAVLLLGGVTTDRGTGVQDDPMLASLGAYALRQMGEALA 316
BLAST of mRNA_H-paniculata_contig15436.3183.1 vs. uniprot
Match: A0A7S2UWP8_9STRA (Peptidylprolyl isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWP8_9STRA) HSP 1 Score: 186 bits (472), Expect = 1.180e-53 Identity = 91/190 (47.89%), Postives = 126/190 (66.32%), Query Frame = 1
Query: 4 QVFSKGDEYRTTLEDGTMISGWDTGLAGLRPGDRAIIRCTSRYGYGNEGVTPIIPPNANLIFDVELVENEGNIMNPATFVDANPLTPRSPQSIAAAFDIRNKRKMESMADEGELEGLDKAIAWIKGIYIFGLF-EGETGQEAPWYLKPLITFPIMIAICGVAFYVVLLFNGISTERSA-GVQDDPMLASL 567
+ F+ G+EYRTT+ DGTMI GWD L ++ G++A I Y YG EGV P+I PN+ + ++E++ EGNI+NPATF D NPLTPR+PQ+I AAF+ +R+ A+ LEG K W + +Y FGLF EG+TG++ P L P ITFP + + GVAFY+V + G+ TER+A V DD L+S+
Sbjct: 101 KTFAAGEEYRTTVRDGTMIQGWDIALESMKIGEKAKISLAPEYAYGEEGVAPVIEPNSPVDIELEVLAYEGNILNPATFADNNPLTPRTPQAITAAFESTARRQAREEAELEGLEGFAKFEKWYRSLYFFGLFGEGQTGEKPPILLNPFITFPAIFLVVGVAFYIVFVSGGVITERAAESVLDDASLSSI 290
BLAST of mRNA_H-paniculata_contig15436.3183.1 vs. uniprot
Match: A0A7S2I8Q8_9STRA (Peptidylprolyl isomerase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I8Q8_9STRA) HSP 1 Score: 158 bits (399), Expect = 7.610e-43 Identity = 81/182 (44.51%), Postives = 113/182 (62.09%), Query Frame = 1
Query: 10 FSKGDEYRTTLEDGTMISGWDTGLAGLRPGDRAIIRCT--SRYGYGNEGVTPIIPPNANLIFDVELVENEGNIMNPATFVDANPLTPRSPQSIAAAFDIRNKRKMESMADEGELEGLDKAIAWIKGIYIFGLFEGETGQEAPWYLKPLITFPIMIAICGVAFYVVLLFNGISTERSAGVQDD 549
FSK D+ R + DG MI GW+ L + G+RA IR + +++GYG GV PI+PPNA + D+E++ E + A F + PLTPR+P++I AA++ R + K++ + EGL I Y FG FEGETGQ+APW+L+P ITFP+ A+ G AFY+ L F IS ER A V D+
Sbjct: 88 FSKSDKQRMIVGDGQMIEGWELALLSMNVGERATIRISDPNKFGYGEAGVPPIVPPNAPIEMDMEILGAEERLEMGA-FANNEPLTPRTPKAIRAAYEARKEAKIQDAIENPPAEGLQAWIEKFNSFYFFGFFEGETGQQAPWFLRPSITFPLAFAVVGAAFYISLKFGAIS-ERGAQVTDE 267
BLAST of mRNA_H-paniculata_contig15436.3183.1 vs. uniprot
Match: A0A7S4QU46_9STRA (Peptidylprolyl isomerase n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QU46_9STRA) HSP 1 Score: 153 bits (387), Expect = 4.220e-41 Identity = 81/182 (44.51%), Postives = 113/182 (62.09%), Query Frame = 1
Query: 10 FSKGDEYRTTLEDGTMISGWDTGLAGLRPGDRAIIRC--TSRYGYGNEGVTPIIPPNANLIFDVELVENEGNIMNPATFVDANPLTPRSPQSIAAAFDIRNKRKMESMADEGELEGLDKAIAWIKGIYIFGLFEGETGQEAPWYLKPLITFPIMIAICGVAFYVVLLFNGISTERSAGVQDD 549
F++ ++ R + DG MI GW+ L + G+RA +R +++GYG GV PI+P NA + ++E++ E + A F + PLTPR+P++I AA++ R K++ + LEGLD IK Y FG FEGETGQ+APW+L+P ITFPI AI G AFYV L F IS ER A V D+
Sbjct: 85 FAQSEKQRMIVGDGQMIEGWELALLTMNVGERATVRIDDAAKFGYGEAGVPPIVPSNAPIEMEMEILSAEERLEMGA-FANNEPLTPRTPKAIRAAYEARQSAKLQDEIENPPLEGLDYWKDKIKSYYFFGFFEGETGQQAPWFLRPSITFPIAFAIVGAAFYVSLKFGAIS-ERGAQVTDE 264
BLAST of mRNA_H-paniculata_contig15436.3183.1 vs. uniprot
Match: A0A7S0CD00_9STRA (Peptidylprolyl isomerase n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CD00_9STRA) HSP 1 Score: 149 bits (377), Expect = 1.400e-39 Identity = 81/181 (44.75%), Postives = 112/181 (61.88%), Query Frame = 1
Query: 10 FSKGDEYRTTLEDGTMISGWDTGLAGLRPGDRAIIRCTS-RYGYGNEGVTPIIPPNANLIFDVELVENEGNIMNPATFVDANPLTPRSPQSIAAAFDIRNKRKMESMADEGELEGLDKAIAWIKGIYIFGLFEGETGQEAPWYLKPLITFPIMIAICGVAFYVVLLFNGISTERSAGVQDD 549
F+K + + + +G MI GW+ GL +R G+R++IR + RYGYG GV+P+IPPNA + D+++ E + + T A+PL PR+P SIAAA++ R ++ +E + EGLD I IKG Y FG FEGETG++ PWYL P ITFPI A+ G AF V L G ER V D+
Sbjct: 91 FAKSNAEKMIVGEGLMIDGWEFGLQSMRQGERSVIRVSDPRYGYGISGVSPLIPPNAEIEMDIQVSLVEAGV-DLGTIASADPLKPRTPASIAAAYNTRREQAALDALNETD-EGLDYWIKKIKGYYFFGFFEGETGEKPPWYLTPSITFPIAFAVVGAAF-AVSLAGGAIKERGVQVTDE 268
BLAST of mRNA_H-paniculata_contig15436.3183.1 vs. uniprot
Match: A0A7S1D6P4_CYCTE (Peptidylprolyl isomerase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D6P4_CYCTE) HSP 1 Score: 138 bits (348), Expect = 2.010e-35 Identity = 77/181 (42.54%), Postives = 104/181 (57.46%), Query Frame = 1
Query: 10 FSKGDEYRTTLEDGTMISGWDTGLAGLRPGDRAIIRCTS-RYGYGNEGVTPIIPPNANLIFDVELVENEGNIMNPATFVDANPLTPRSPQSIAAAFDIRNKRKMESMADEGELEGLDKAIAWIKGIYIFGLFEGETGQEAPWYLKPLITFPIMIAICGVAFYVVLLFNGISTERSAGVQDD 549
FS+ + + + DG+MI GWD L + G+RA++R GYG G P+IPPNA + DVE++++E + +P TPR+ IAAA+D + E + EGL+ + K Y FGLFEGETGQEAPWYLKP ITFP+ I G FYV ++ G TER A V D+
Sbjct: 82 FSRSERQQMIVGDGSMIDGWDIVLQSMTIGERAVVRIKDPELGYGAAGFPPLIPPNAEIEIDVEVLDSERQRSLNLDEIMLDPSTPRTAADIAAAYD---RLLAEKALQPPKKEGLEGFLEEAKNWYFFGLFEGETGQEAPWYLKPSITFPLAFLIVGATFYVCVI-GGAITERGAQVTDE 258
BLAST of mRNA_H-paniculata_contig15436.3183.1 vs. uniprot
Match: A0A7S1GGZ7_9STRA (Peptidylprolyl isomerase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1GGZ7_9STRA) HSP 1 Score: 138 bits (348), Expect = 2.380e-35 Identity = 80/189 (42.33%), Postives = 110/189 (58.20%), Query Frame = 1
Query: 7 VFSKGDEYRTTLEDGTMISGWDTGLAGLRPGDRAIIRCTS-RYGYGNEGVTPIIPPNANLIFDVELV---ENEGNIMNPATF----VDANPLTPRSPQSIAAAFDIRNKRKMESMADEGELEGLDKAIAWIKGIYIFGLFEGETGQEAPWYLKPLITFPIMIAICGVAFYVVLLFNGISTERSAGVQDD 549
FS+ D R DG MI G+D + ++ G+RA +R + +YGYG GV P +PP A L D+E++ E+ G +PA +D PR+P +IAAA++ R K+K +M + E EG++ + +K Y FGLFEGETGQEAPWYLKP ITFPI + G AF+ L IS ER D+
Sbjct: 83 AFSRSDRQRFVAGDGIMIPGFDVAIRSMKEGERASVRISDPKYGYGEAGVPPFVPPMAQLELDLEVLNIEESVGLSADPAEMGALGMDGPINRPRTPAAIAAAYEQRMKQK--AMNEPEEKEGIEWVVDKVKNSYFFGLFEGETGQEAPWYLKPSITFPIAFLVVGAAFWASLAGGAIS-ERGMPTTDE 268
BLAST of mRNA_H-paniculata_contig15436.3183.1 vs. uniprot
Match: A0A7S2DQU6_9STRA (Peptidylprolyl isomerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DQU6_9STRA) HSP 1 Score: 138 bits (347), Expect = 3.930e-35 Identity = 76/194 (39.18%), Postives = 111/194 (57.22%), Query Frame = 1
Query: 7 VFSKGDEYRTTLEDGTMISGWDTGLAGLRPGDRAIIRCTSRYGYGNEGVTPIIPPNANLIFDVELVENEGNIMNPATFVDANPLTPRSPQSIAAAFDIRNKRKMESMADEGELEGLDKAIAWIKGIYIFGLFEGETGQEA-----PWYLKPLITFPIMIAICGVAFYVVLLFNGISTERSAGVQDDPMLASLGA 573
VF + T+ + I GW+ L +R G+ A S YGYG+ G+ P+IPPN L F+VE+ + +GNI+ +TF D +PL PR+P +I A ++ R K EG++ IAW K IY+FGLF GET + A WYL+P+ITFP M+AI GV F++V + I+ R D+ +L ++ A
Sbjct: 107 VFGDSNGIMVTVGSDSAIDGWNAALRTMRTGEVAEFSVASNYGYGSSGIKPVIPPNTPLHFEVEIQDYKGNILLDSTFEDNSPLIPRTPATIKAEYERRQAEKAVKK------EGIEGFIAWAKNIYVFGLF-GETIETARPEDLAWYLRPVITFPAMVAIVGVTFWLVAISGSITLIREVTDVDNYLLDTVTA 293
BLAST of mRNA_H-paniculata_contig15436.3183.1 vs. uniprot
Match: B7G149_PHATC (Peptidylprolyl isomerase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G149_PHATC) HSP 1 Score: 137 bits (344), Expect = 1.820e-34 Identity = 78/187 (41.71%), Postives = 114/187 (60.96%), Query Frame = 1
Query: 10 FSKGDEYRTTLEDGTMISGWDTGLAGLRPGDRAIIRCTS-RYGYGNEGVTPIIPPNANLIFDVELVENEGNIMNPATF-VDANPL-----TPRSPQSIAAAFDIRNKRKMESMADEGELEGLDKAIAWIKGIYIFGLFEGETGQEAPWYLKPLITFPIMIAICGVAFYVVLLFNGISTERSAGVQDD 549
F++ + + DG+MI GW+ L +R G+R+I+R T + GYG +GV P++PPNA L D+ +++ + PAT +D + L TPR+ I+AAF+ R + E + ELEGL+ IA + Y FGLFEGETG+ APW+L+P ITFP+ I G AFYV + IS ER A ++D+
Sbjct: 110 FARALSQKVVVGDGSMIVGWEKALRSMRVGERSIVRITDPQLGYGAQGVVPVVPPNAVLELDLNVLD-----VQPATTNIDFDTLAMADTTPRTASEISAAFEARQAARGEVV----ELEGLEYWIAKARNFYFFGLFEGETGERAPWFLRPSITFPLAFLIVGAAFYVSFIGGAIS-ERGAQIKDE 286 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15436.3183.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig15436.3183.1 >prot_H-paniculata_contig15436.3183.1 ID=prot_H-paniculata_contig15436.3183.1|Name=mRNA_H-paniculata_contig15436.3183.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=185bp MISGWDTGLAGLRPGDRAIIRCTSRYGYGNEGVTPIIPPNANLIFDVELVback to top mRNA from alignment at H-paniculata_contig15436:2555..5918- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig15436.3183.1 ID=mRNA_H-paniculata_contig15436.3183.1|Name=mRNA_H-paniculata_contig15436.3183.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3364bp|location=Sequence derived from alignment at H-paniculata_contig15436:2555..5918- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig15436:2555..5918- >mRNA_H-paniculata_contig15436.3183.1 ID=mRNA_H-paniculata_contig15436.3183.1|Name=mRNA_H-paniculata_contig15436.3183.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1110bp|location=Sequence derived from alignment at H-paniculata_contig15436:2555..5918- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |