mRNA_H-paniculata_contig1496.2947.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1496.2947.1
Unique NamemRNA_H-paniculata_contig1496.2947.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig1496.2947.1 vs. uniprot
Match: A0A6H5KVZ6_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVZ6_9PHAE)

HSP 1 Score: 305 bits (782), Expect = 2.410e-96
Identity = 151/195 (77.44%), Postives = 165/195 (84.62%), Query Frame = 1 
Query:  223 GICSS----HHRERRTVLPAVSELVGASEETGGVFDPMGFATDEASLYRRRVAELKHGRVCMLATVGVIVQSFVHLPDPTRSAFSNTRPLGALFQVWRERPLILIVMVASMGIIELTVGREDYGGYDAEPGRLGEFWQKARPREPVLWRKRQLQELKHGRLATLAITGMLAQELVTHEGPVEQLLNGHINPFDHY 795
            GIC S    H +   T   AVSE+VGASEETGGVFDP+G ATDE SLYRRRVAELKHGRVCMLATVGV+VQSFV  PDP RSAFSNTRPLGALFQVWRERP+IL+ +VA MG+IELT+GREDYG  +AEPG+LGE WQ ARP +P LWR+RQLQELKHGRLA+L ITGMLAQELVTHEGPVEQLL G INPF  Y
Sbjct:   33 GICPSISRSHQQLPETCRYAVSEMVGASEETGGVFDPLGLATDETSLYRRRVAELKHGRVCMLATVGVLVQSFVQFPDPDRSAFSNTRPLGALFQVWRERPVILLGIVALMGLIELTIGREDYGSSEAEPGKLGELWQTARPEDPQLWRRRQLQELKHGRLASLGITGMLAQELVTHEGPVEQLLKGDINPFHEY 227
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BLAST of mRNA_H-paniculata_contig1496.2947.1 vs. uniprot
Match: D8LBT8_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT8_ECTSI)

HSP 1 Score: 296 bits (758), Expect = 1.350e-93
Identity = 141/172 (81.98%), Postives = 155/172 (90.12%), Query Frame = 1 
Query:  280 LVGASEETGGVFDPMGFATDEASLYRRRVAELKHGRVCMLATVGVIVQSFVHLPDPTRSAFSNTRPLGALFQVWRERPLILIVMVASMGIIELTVGREDYGGYDAEPGRLGEFWQKARPREPVLWRKRQLQELKHGRLATLAITGMLAQELVTHEGPVEQLLNGHINPFDHY 795
            +VGASEETGGVFDP+G ATDE SLYRRRVAELKHGRVCMLATVGV+VQSFV  PDP RSAFSNTRPLGALFQVWRERP+IL+ +VA MG+IELT+GREDYG  +AEPG+LG+FWQ ARP +P LWR+RQLQELKHGRLA+L ITGMLAQELVTHEGPVEQLL G INPF  Y
Sbjct:    1 MVGASEETGGVFDPLGLATDETSLYRRRVAELKHGRVCMLATVGVLVQSFVQFPDPDRSAFSNTRPLGALFQVWRERPVILLGIVALMGLIELTIGREDYGSSEAEPGKLGDFWQAARPEDPQLWRRRQLQELKHGRLASLGITGMLAQELVTHEGPVEQLLKGDINPFHEY 172
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BLAST of mRNA_H-paniculata_contig1496.2947.1 vs. uniprot
Match: A0A835ZAI4_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAI4_9STRA)

HSP 1 Score: 185 bits (470), Expect = 8.390e-51
Identity = 92/173 (53.18%), Postives = 125/173 (72.25%), Query Frame = 1 
Query:  268 AVSELVGASEETGGVFDPMGFATDEASLYRRRVAELKHGRVCMLATVGVIVQSFVHLPDPTRSAFSNTRPLGALFQVWRERPLILIVMVASMGIIELTVGREDYGGYDAEPGRLGEFWQKARPREPVLWRKRQLQELKHGRLATLAITGMLAQELVTHEGPVEQLLNGHINPF 786
            +V ++VG   ETGG+FDP+GF+ DEASL+RRR  ELKHGR+CMLAT GV+VQ++VHLPD   + FSN RP+GAL QV  +RP+  I ++ ++G++ELT G +DY   +  PG LG F    +P +     + QL+ELK+GRLA + I GML QE +T +GP+EQLL GH +PF
Sbjct:   42 SVEDMVGIDVETGGLFDPLGFSKDEASLFRRRAVELKHGRICMLATFGVLVQTYVHLPD---AVFSNPRPIGALLQVLDQRPVAAIQILLAIGLLELTAGAQDYA--NKAPGDLGRFGDAFKPDDAGELAELQLKELKNGRLAMMGIMGMLVQEGLTKQGPIEQLLVGHTSPF 209
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BLAST of mRNA_H-paniculata_contig1496.2947.1 vs. uniprot
Match: D5KBP8_ELYCH (Light harvesting complex protein 3 (Fragment) n=4 Tax=Eukaryota TaxID=2759 RepID=D5KBP8_ELYCH)

HSP 1 Score: 173 bits (439), Expect = 2.470e-47
Identity = 84/150 (56.00%), Postives = 114/150 (76.00%), Query Frame = 1 
Query:  313 FDPMGFATDEASLYRRRVAELKHGRVCMLATVGVIVQSFVHLPDPTRSAFSNTRPLGALFQVWRERPLILIVMVASMGIIELTVGREDYGGYDAEPGRLGEFWQKARPREPVLWRKRQLQELKHGRLATLAITGMLAQELVTHEGPVEQL 762
            +DP+GF+ DEASL+RRRV ELKHGR+CMLAT+GV VQ+ +HLPDP    FSN RP+GAL QV+ ERP+ +  ++ ++G IEL++G++DY   +  PG LG F   A+P +P+ W K QL+ELK+GRLA +AI GML QE +T +GP+EQ 
Sbjct:    1 WDPLGFSKDEASLFRRRVVELKHGRICMLATLGVFVQNSIHLPDPV---FSNPRPIGALLQVFAERPIAIWQIILAIGAIELSIGKQDYE--NKAPGDLGSFGDFAKPSDPIEWEKVQLRELKNGRLAMMAIMGMLVQEGLTKQGPLEQF 145
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BLAST of mRNA_H-paniculata_contig1496.2947.1 vs. uniprot
Match: A0A6H5JT49_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT49_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 7.180e-47
Identity = 94/191 (49.21%), Postives = 122/191 (63.87%), Query Frame = 1 
Query:  229 CSSHHRERRT----VLPAVSELVGASEETGGVFDPMGFATDEASLYRRRVAELKHGRVCMLATVGVIVQSFVHLPDPTRSAFSN-TRPLGALFQVWRERPLILIVMVASMGIIELTVGREDYGGYDAEPGRLGEFWQKARPREPVLWRKRQLQELKHGRLATLAITGMLAQELVTHEGPVEQLLNGHINPF 786
            C S  R R +    +  ++ E++GA  E+GG+FDP+GF+ DE SL+RRR  ELKHGRV MLA  G++VQSFVH P       SN  RPL  L  +       +++ +   G++ELT+G++DY   D  PG LGEF   A+P +   W K Q+ ELKHGRLA L + G L QELVT EGPVEQLLNG+I PF
Sbjct:   45 CHSSTRSRSSSAARIEMSIREMIGADVESGGLFDPLGFSKDEPSLFRRRAVELKHGRVAMLAVTGILVQSFVHFPGFPPFPVSNPARPLAVLKGLLSTEGNNVVLFLLGTGVVELTIGKQDY--VDRAPGELGEFGAFAKPVDKEEWDKVQMAELKHGRLAMLGVVGCLVQELVTGEGPVEQLLNGNIFPF 233
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BLAST of mRNA_H-paniculata_contig1496.2947.1 vs. uniprot
Match: W7TRI0_9STRA (Light-harvesting protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRI0_9STRA)

HSP 1 Score: 171 bits (434), Expect = 3.070e-46
Identity = 90/187 (48.13%), Postives = 124/187 (66.31%), Query Frame = 1 
Query:  268 AVSELVGASEETGGVFDPMGFATDEASLYRRRVAELKHGRVCMLATVGVIVQSFVHLPDPTRSAFSNTRPLGALFQVWRERPLILIVMVASMGIIELTVGREDYGGYDAEPGRLGEFWQKARPREPVLWRKRQLQELKHGRLATLAITGMLAQELVTHEGPVEQLLNGHINPFDHY*S*SGGGFGLI 828
            + S+++G   ETGG+FDP+GF+ DE SLY+ R  ELKHGRV MLA +G +VQS+ HLPD     FSN RPLGAL Q+  ERPL ++ +V ++ +IE+T G++D    +  PG+LG F +  +P         QL+ELK+GRLA +AI G   QEL+T +GP+EQ+ +GHI+PF       G G GL 
Sbjct:    2 SASDMIGIDVETGGLFDPLGFSKDEQSLYKYRQVELKHGRVAMLACLGTLVQSYTHLPD---DVFSNPRPLGALGQLLSERPLAILQIVIAITLIEVTSGKQDP---ELAPGQLGRFGEAFKPEGEAEMAAVQLKELKNGRLAMVAIIGQWVQELLTGQGPIEQITSGHISPF-------GDGQGLF 175
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BLAST of mRNA_H-paniculata_contig1496.2947.1 vs. uniprot
Match: W7U405_9STRA (Light-harvesting protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U405_9STRA)

HSP 1 Score: 171 bits (432), Expect = 1.530e-45
Identity = 92/178 (51.69%), Postives = 120/178 (67.42%), Query Frame = 1 
Query:  253 RTVLPAVSELVGASEETGGVFDPMGFATDEASLYRRRVAELKHGRVCMLATVGVIVQSFVHLPDPTRSAFSNTRPLGALFQVWRERPLILIVMVASMGIIELTVGREDYGGYDAEPGRLGEFWQKARPREPVLWRKRQLQELKHGRLATLAITGMLAQELVTHEGPVEQLLNGHINPF 786
            R+V  AV+E++G+  ET GVFDP+G A DEASLYR R+ ELKHGRV MLA +G +VQSF HLPD     FSN RPL AL QV+ ERP+    +  ++G IELT+G++D    +  PG +G F     P +   +   QL+ELK+GRLA +AI G   QE +T +GP+EQLL GH +PF
Sbjct:   28 RSVRMAVNEMIGSDVETNGVFDPLGLAKDEASLYRSRLIELKHGRVAMLACLGTLVQSFYHLPD---EVFSNPRPLAALAQVYSERPVAFWQIFLAIGAIELTIGKQDTA--NRAPGDVG-FGAAFIPDDAEDFAALQLKELKNGRLAMMAIIGQFVQEKLTGQGPIEQLLEGHFSPF 199
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BLAST of mRNA_H-paniculata_contig1496.2947.1 vs. uniprot
Match: A0A835ZIK7_9STRA (Chlorophyll a/b-binding protein domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIK7_9STRA)

HSP 1 Score: 165 bits (418), Expect = 8.330e-44
Identity = 87/184 (47.28%), Postives = 119/184 (64.67%), Query Frame = 1 
Query:  268 AVSELVGASEETGGVFDPMGFATDEASLYRRRVAELKHGRVCMLATVGVIVQSFVHLPDPTRSAFSNTRPLGALFQVWRERPLILIVMVASMGIIELTVGREDYGGYDAEPGRLGEFWQKARPREPVLWRKRQLQELKHGRLATLAITGMLAQELVTHEGPVEQLLNGHINPFDHY*S*SGGGF 819
            AV +++GA  ET GV+DP+  + D+ +L++ R  ELKHGRV MLAT+GV+VQSF HLPDP    FSN RPL AL Q+  ERP+    +  ++G  EL++G++DY   +  PG +  F    +P +   W K QL+ELK+GRLA +A  GM  QE +T +GP+EQL  GHI+PF       G GF
Sbjct:   14 AVQDMLGADIETSGVWDPLRLSKDDGNLFKYREVELKHGRVAMLATLGVLVQSFNHLPDPV---FSNPRPLAALSQILAERPVAFWQIFLAVGAFELSIGKQDYE--NKAPGDIATFGDFVKPSDEDEWEKIQLRELKNGRLAMVASIGMFVQEALTGQGPIEQLQVGHISPFG-----DGSGF 187
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BLAST of mRNA_H-paniculata_contig1496.2947.1 vs. uniprot
Match: A0A0G4GDB0_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GDB0_VITBC)

HSP 1 Score: 161 bits (408), Expect = 4.630e-42
Identity = 93/184 (50.54%), Postives = 120/184 (65.22%), Query Frame = 1 
Query:  244 RERRTVLP--AVSELVGASEETGGVFDPMGFATDEASLYRRRVAELKHGRVCMLATVGVIVQSF-VHLPDPTRSAFSNTRPLGALFQVWRERPLILIVMVASMGIIELTVGREDYGGYDAEPGRLGEFWQKARPREPVLWRKRQLQELKHGRLATLAITGMLAQELVTHEGPVEQLLNGHINPF 786
            R  R+  P  +V E++GA  ETGGVFDP+ F+ DEASL+RRR  ELKHGR+ MLA +G  VQS  VHLPDP    FS  RPL AL +V  ERP     +VA++  IEL  GR+DY   +  PG LG F    +  +P  +RK QL+ELK+GRLA + I GM+ QE +T +   EQ+ +G+INPF
Sbjct:   35 RALRSTTPKMSVEEMIGADVETGGVFDPLKFSEDEASLFRRRAVELKHGRIAMLACLGYFVQSAGVHLPDPV---FSEPRPLSALTKVLTERPWAAAQIVAAIAAIELGPGRQDYE--NKAPGDLGYFGDSFKNSDPEEFRKDQLRELKNGRLAMIGIMGMMVQEGLTGQSVWEQIGSGNINPF 213
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BLAST of mRNA_H-paniculata_contig1496.2947.1 vs. uniprot
Match: A0A0G4FFG9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FFG9_VITBC)

HSP 1 Score: 161 bits (407), Expect = 6.590e-42
Identity = 84/177 (47.46%), Postives = 118/177 (66.67%), Query Frame = 1 
Query:  256 TVLPAVSELVGASEETGGVFDPMGFATDEASLYRRRVAELKHGRVCMLATVGVIVQSFVHLPDPTRSAFSNTRPLGALFQVWRERPLILIVMVASMGIIELTVGREDYGGYDAEPGRLGEFWQKARPREPVLWRKRQLQELKHGRLATLAITGMLAQELVTHEGPVEQLLNGHINPF 786
            T + AV +L GA  ETGGV+DP+G + +E +L   R AELKHGRVCM+A +GVIVQ++  LPDP    F+N RPL A+ QVW++RP  +I ++ ++G  EL   R+     +  PG L  F    RPR+   + + Q +ELK+GRLA + I+GML QE +T +GP+EQ+  GHI+PF
Sbjct:   38 TTMGAVDQLAGADVETGGVWDPLGLSQNEDALSLYRAAELKHGRVCMMAVLGVIVQTYFQLPDPV---FNNPRPLEAIVQVWQQRPEAIIQILLAIGATELYFLRQSP---EDPPGSLQNFGAAFRPRDEAKFEELQRKELKNGRLAMIGISGMLVQEALTGQGPLEQIQVGHISPF 208
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1496.2947.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVZ6_9PHAE2.410e-9677.44LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LBT8_ECTSI1.350e-9381.98Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A835ZAI4_9STRA8.390e-5153.18Light harvesting complex protein n=1 Tax=Tribonema... [more]
D5KBP8_ELYCH2.470e-4756.00Light harvesting complex protein 3 (Fragment) n=4 ... [more]
A0A6H5JT49_9PHAE7.180e-4749.21LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
W7TRI0_9STRA3.070e-4648.13Light-harvesting protein n=1 Tax=Nannochloropsis g... [more]
W7U405_9STRA1.530e-4551.69Light-harvesting protein n=2 Tax=Monodopsidaceae T... [more]
A0A835ZIK7_9STRA8.330e-4447.28Chlorophyll a/b-binding protein domain-containing ... [more]
A0A0G4GDB0_VITBC4.630e-4250.54Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A0G4FFG9_VITBC6.590e-4247.46Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1496contigH-paniculata_contig1496:16677..23139 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score132.1
Seed ortholog evalue3.3e-28
Seed eggNOG ortholog2880.D7FPU8
KEGG koko:K08907
KEGG Pathwayko00196,map00196
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Chlorophyll A-B binding protein
EggNOG OGs2CDPH@1,2S44M@2759
Ec32 ortholog descriptionLight harvesting complex protein
Ec32 orthologEc-27_002740.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00194
Exons5
Model size2069
Cds size684
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929196.005372-UTR-H-paniculata_contig1496:16676..179471622929196.005372-UTR-H-paniculata_contig1496:16676..17947Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1496 16677..17947 -
1691480766.170465-UTR-H-paniculata_contig1496:16676..179471691480766.170465-UTR-H-paniculata_contig1496:16676..17947Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1496 16677..17947 -
1622929196.1069322-UTR-H-paniculata_contig1496:23025..231391622929196.1069322-UTR-H-paniculata_contig1496:23025..23139Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1496 23026..23139 -
1691480766.225366-UTR-H-paniculata_contig1496:23025..231391691480766.225366-UTR-H-paniculata_contig1496:23025..23139Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1496 23026..23139 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929196.024347-CDS-H-paniculata_contig1496:17947..180331622929196.024347-CDS-H-paniculata_contig1496:17947..18033Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1496 17948..18033 -
1691480766.1809351-CDS-H-paniculata_contig1496:17947..180331691480766.1809351-CDS-H-paniculata_contig1496:17947..18033Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1496 17948..18033 -
1622929196.0387504-CDS-H-paniculata_contig1496:18560..186241622929196.0387504-CDS-H-paniculata_contig1496:18560..18624Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1496 18561..18624 -
1691480766.18859-CDS-H-paniculata_contig1496:18560..186241691480766.18859-CDS-H-paniculata_contig1496:18560..18624Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1496 18561..18624 -
1622929196.0516076-CDS-H-paniculata_contig1496:19178..193311622929196.0516076-CDS-H-paniculata_contig1496:19178..19331Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1496 19179..19331 -
1691480766.1963406-CDS-H-paniculata_contig1496:19178..193311691480766.1963406-CDS-H-paniculata_contig1496:19178..19331Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1496 19179..19331 -
1622929196.07029-CDS-H-paniculata_contig1496:19769..199221622929196.07029-CDS-H-paniculata_contig1496:19769..19922Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1496 19770..19922 -
1691480766.2057245-CDS-H-paniculata_contig1496:19769..199221691480766.2057245-CDS-H-paniculata_contig1496:19769..19922Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1496 19770..19922 -
1622929196.0937455-CDS-H-paniculata_contig1496:22797..230251622929196.0937455-CDS-H-paniculata_contig1496:22797..23025Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1496 22798..23025 -
1691480766.2169874-CDS-H-paniculata_contig1496:22797..230251691480766.2169874-CDS-H-paniculata_contig1496:22797..23025Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1496 22798..23025 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1496.2947.1prot_H-paniculata_contig1496.2947.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1496 17948..23025 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1496.2947.1

>prot_H-paniculata_contig1496.2947.1 ID=prot_H-paniculata_contig1496.2947.1|Name=mRNA_H-paniculata_contig1496.2947.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=228bp
MLAFVGVNVSPHALATQGLSSPNSALWTSETGARTAGICSSHHRERRTVL
PAVSELVGASEETGGVFDPMGFATDEASLYRRRVAELKHGRVCMLATVGV
IVQSFVHLPDPTRSAFSNTRPLGALFQVWRERPLILIVMVASMGIIELTV
GREDYGGYDAEPGRLGEFWQKARPREPVLWRKRQLQELKHGRLATLAITG
MLAQELVTHEGPVEQLLNGHINPFDHY*
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mRNA from alignment at H-paniculata_contig1496:16677..23139-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1496.2947.1 ID=mRNA_H-paniculata_contig1496.2947.1|Name=mRNA_H-paniculata_contig1496.2947.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6463bp|location=Sequence derived from alignment at H-paniculata_contig1496:16677..23139- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCCGTGTAGTTCAACTTTGCGACAAACAACTGCAATCTTTCGTATTACAC
CCCCCTTGCACGGCCCAGATCCCCGACTCTGCAACAAGCTACAGTGCTGA
AGTGCTATCCACCAATGTTAGCTTTCGTCGGTGTTAATGTTAGCCCTCAT
GCGCTAGCGACGCAAGGTTTGTCGTCGCCAAATTCGGCTTTATGGACAAG
TGAGACTGGTGCAAGAACCGCAGGGATTTGTTCCAGCCATCACAGAGAGA
GGCGTACCGTGCTGCCTGCTGTCTCCGAGCTTGTAGGGGCGTCGGAGGAG
ACCGGCGGCGTATTCGACCCTATGGGATTTGCCACCGATGAGGTATAGTG
GAGGGGAGGTGGTGGCGGGCTCGAGACGCAGGGTTGCGTCTGACTTGGAT
AATTTGTTTCCAAATCCAAATCCTGACGCACGTTTGTTTCCAGCCTACCA
TGATGTTATTAATCCGTGTACTGAAGTTTGTCCATTGCACAGTACATGTC
ATATGTATCTCAGGTACCAGGAGAGATGGTTGTACCATTACGACAATCTG
ATACAGATGGCGACGCCGATGTAGTGAATGTTTGGATACACTGTCCTCAG
GGGCCACTACGCTCTCAAACCAGTGGAGTTAAAGGGGAGCAATTGTTATT
TGGAGAGAGAGGGGAGACAAAAACGCGCTGAAATGAACACTTCCGAAATG
ACGTTCATGAGACAATCTTTGCTAGTCAGATCCAGTAGAGACAGATAAGA
TAGTATAGTGTGTATACTGGATGGCGTTCTCAATATTCATATTACCCGCC
CAGAATCAGGGATCAGAGTAGGTACCCACTACCAGGGAAGGCCACATCGA
AAATACTGCGCAATCTCAAGTATCACGCAGTACGTACTCGCGAAAATTAC
TGAGTATACCTCCAGTACTTCCTGGCAAAACACTAGAGAGGCTCACTATT
AGATTTCGAATTCCTGAACAAACAGGTGAGTATATACTGGGAAAATAACG
TCGTGACTTGGTATTAGTCACAAATCGTAACATTATGTGCGATTTGTAGA
CTGTACAGCGTTTTGATGTTTTCATTGGATTGTATGAATTCTGGATAGTC
CCAATTGCTTCCAGTATCAGTATGAGAGTAGGTACCTGTTACCATTTCGT
GGCCACGTCGATAATACTGCGAGATCTCAAGTTATGACCACTATCTCCTC
CCGAAAATACTGAATTTATCTCGAGTACTCCCTCGCAAAATACGGAGATG
ACTCGGTACCGCCAGTCAGTAGGATGTGGTGCAGTAAAGCAGTTGAGATG
AGGGTAACGATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGTT
GGCAGTCACCAACATTCCCCAAGAATTCCCTAAAGAGCGATGGCTGCTGC
GTGTTTGGCGTTCTCTCGTGAGTGATGGTACCAACAGACACGACAGCCGA
CAGGTTGTCACAATTGTCGCAGTTGGGGCATGACAAGACGACTCAACGTG
CAATAGCGTAATGGGTAATTCGGCGTTCGTCTTCCCGTAAAACACTTGTT
CGATTTGTGATTTTCTTGTTTTTCCACGAGCCAAAGATTCGATCCTACTT
CGAAGTTCGACAAGATCCCAGCATGCCATGGAGGGAAGGGGAAAAAGAGG
GAGGAGAAAAAAGGTGAAAAAAAACTCAAGTGCAGAACGGCTAACAACGC
TCCTACCAACGTGAGCCCTCCCACGCACAAGCTCGCATCCCCCCGAAGAC
AACACCAAGCATATGGCAACAACAAAAAATAAACAACAGATGCACGTAGG
CCAGTGAAAATCGAAATACAACACATGACCGCAAAGCCAAAACTTTGAAG
CAAACCTCCCCAAGCGCCAACGGATGGCAACACGGGCAAGATAGCCGTAC
TACTATATCATGGGGCTATACACCTCCATCACCACCAGTATGCACCATCC
ATAACACGGGTATATACCCGGTAATTTAGGTAGTGAATCAGGACAATAAT
TATAACGCATGTGAGCATTATTTCCGAAGATCTGGAGAACTACAAGTATG
GATTTGGATTTACAGTAACACTTTACGTGTAACTTGTGTCGTGTTCGTGC
CTACGACACATCAGAAGGCCACTTGAGGTGGTGAAACAAATTAGGGACTC
CATGTTGACTCGCTCCGCTACTGCGGCAGCCGCGACCGCGAACGCGGGCT
CTCCTTTCACATCGCAAGATGCAGCAGATCACGAAGCAGGGTCGACCCCC
ATGACAGAGGCTCAGCTCCGCGACACATCCATGTCGTTGATGCGCGGCAC
GACGGTACACCAGCTGCCCATTCTTGCGCCCATACCTTCCCTGATGTCTG
TCATTGATCCTGGGCTGGTTCGGGACGGCGATCTCAACCACCTCGAGAGG
TTTGCGGCGAATGTGTCCCTCCAAAAGATGGCATATTTTCTGCACACTTT
TGCACTGACACCAGCGGGCTATGGAAATGGCTGCAGCTTAGTAATGTTTA
TCACCTTCTGTCGGAATAGTCCATAGTTTTTGCAGTACTTGTTTTCACGG
TGTACTGCCCGACTCCTTCACCAACCTGGACGATTTTAGATGCTACCAGG
CTCTGATTTCACCCTCGAAGGGCTAGATTTTAAGGATTGGGTAGGGTTAG
AGTAGTGCTTACAGCTTTGCCCGTGCATTTTGACAAAAACTGAAAGTCAA
GTACCTGTGGGAACCTCGTGCCACCCCAGGCAGGCACGACCGTCTCCGCG
CTGGCCCCACACGGAGATTTCAGGGACTTGATGTCGACCTGCTTCGCTAC
TATCGCCGCTGCGACGGCCGCGGCAGCATCCGCTACTGCAGGCTATTCCT
CGAGCAGTCTGGCGGCTAGGGCAGCCGCTGACCCCAACATACGCTAATGG
AAAGCGAAAAGTATGTGTACCACTGCATGTTTTCATCGAGGAAAGGTTAT
TCTTTTAACAATTTCGTCAGACATGAGATGGTGTCTGTATTTGTCTTCGA
TTTGGATACATTGTTTTCTGAGGATGCTCGCATCCATTTTCTCTGTAAAT
TCAAAGTCGTGGAGCGAAGCTTGTGAACACTTCGCGTCGTACGATCGAGT
TTGTCGGCTCCACCGCAGAACCGAAATTATTCGAGATGAATAGTTGGCTG
TTCCGGTCACACGCCGTTTTCCGAACGTACCTCCGTTCTCTCCGTTGTCG
TTTTCGTCCCTTCGCAGGCATCTCTGTATCGGCGACGGGTGGCGGAATTG
AAGCACGGCAGGGTTTGCATGTTGGCTACAGTTGGTGTTATAGTTCAATC
GTTCGTTCATCTACCGGACCCTACTCGGTCGGCGTTCTCCAACACAAGAC
CACTCGGAGCGCTGTTTCAGGTAATTGGGAGGCGTTGTTGCTCGACACGA
GTGGTACACGCGTAATTCGATGTTTGTGAACAAGTGTCGTGTATATACAT
CATGACCCCAATGCTCGTGTCATTGTGTTCATGTCTCTAGTGACATTAGC
AAGACTCATTTGTCGAAGGGCTATGCTCGGTCCGCTTTGCGTAGAGGCTT
GTCTGAGGCTCCTCTGAGACGGTGCAATGGCGGTATTAAATATCTATCCC
GGATAATGCTGGAACAGTATGGCAAGATATCACGGAGGTCAGGGTTCTCG
CTCGTTACTCGCGTCGTATTTCCGTTGCTCTTGGCTTGTCCGAATTCTAC
ATTGTGCATGGCGTATTTATGATGTCGCCGGTAGTTCTCAGAGCTACAGC
CGGTTTATTTTATTTGATGGTTTAGTGGAAAACCCGTGCCTGGCTACGAC
ACCGGCAGGTTTGGCGGGAGCGTCCTCTGATACTTATCGTAATGGTGGCT
TCGATGGGAATCATCGAGCTCACGGTGGGACGGGAGGACTACGGGGGGTA
CGATGCGGAGCCTGGGCGGCTTGGAGAGTTTTGGCAGAAGGCTCGACCCC
GAGAGCCCGTTGTAAGCACCATGTACCATATTTCTCATGTATTTCTCGAT
AGTTGTCACGTTTACTGTGCACTGTAGATTTTGATATGATCGTGCGATTT
GGATGAGATGCCTTAGCGTTGATGTGAGGAAGGAAGTTCACCAATGGGGT
TTTAGCTCCTGAGATGAGACCCATAGAGCGTATTTCGCCGAACAGTTTCT
GGTTGCTGTACCCGCTTCTGACGTCGATTGAAATATTGTCCAGGCTCGAA
ATGCGGCAAGGGTGTCCCAACTCTAGGATTCGCCACCGCTTGTTGTATGT
ATTAATGTGTTTTTGTTGGAGACTCTGACACAAGCCGTATCTACACCAGA
TACGGGGAAGCACCGCCTCTTATGTGCTCTATCCTGCACCGTGTGCATGC
GAACTCATGTTATCAAGAAGCATGGTCAGATGGTATGCTTTCTTTGGGGC
CAACGCCGTGGCTACGTTTGCCTTATTCTCCTTTGATGGCATGAGAGTTA
TCGATGTGTCTGTGCTGAATAGTTTGTGCCATTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGCAGCTTTGGAGGAAACGACAGCTTCAAGAGCTAAAGCA
TGGGCGGCTGGCTACACTTGCGATAACAGGTGAACCACGACGAGTTGCTG
CAGGGCACGGCCGATATCGGTGTCATTGTTGTAGTCTTGCGCAGTTTGGG
TTATATATGGCCATCCTCTAATTCGTTTGTAGAAGTCAACTCCGGCTACA
AATCACGTCTGTCAATCGGCAGTTTCGCACTGCTGAAACCCAACAGTAGC
ATCGAGTAGAACGCCAGAACTGCCGTATAAAGCGATACGCAACGTTGGTT
CTTGCACCTTCGCTGGTCTGCAGGTTTGACTTCCAGTGCCTCACGCTGTA
TCACAGGCAGTGAAATACATGTCAGGTGTTGTTTTACTATTTCGGGTATG
TACTGTATATTTTCGGTTGGTGAGTGTATGTACGGCTTGTACCATGTTCA
GCCCACAATATATGTGCGTCCTCGCGTTTGCTGAAGCACTTTACGCTATC
GTCGTCCGATGTGCAAATTATATTTACCTGGATATGATATCTGTAGTCTT
GTGCTCATGACCACCCACTCTCGCCCTTTGCGGATTGCGTCTTGTGCAAT
GGCCAGGAATGCTCGCCCAAGAGTTGGTGACACATGAGGGGCCCGTGGAG
CAATTGCTCAATGGTCACATCAATCCATTTGATCATTATTAATCATAGTC
GGGGGGCGGCTTTGGGTTGATTGGCCGTTGATGCCTCTGGTGGTTGATTG
GGGCCTGCTAAAGAATTTTGTAGGTTGCTTTGCGTTTAGTGAGACCCCGC
GAACACTGGAACCGGTGTACTTCGTTTTTCAAATCACCCAACCTTTGTAG
CTGTTGTTAAACGTTGAAAAACAAAAAGCGATGCAGGTCACTGAGTGTTA
TGACTTTATAGATAAAAGAGGAATCGTTGTTAAGGTGGCTATAAGTATTT
GGTTGTAGGGCCTTGTGTTTGGCGAGACGCAACAGTATGTCTCGACAGGA
AGTCTCTGAGTTGCTCCCTTTTTTGTTTCTGCGCATTACGCACTTGTACA
GCAGTTGGGGGACAGCGATGAGCTCTCGAGCTTACCCCCACATATTTGTT
AAATATCTCCGCTTTCATTGTGTGCATGGTCGGGGACCGAGCCTGACAAC
GAGTTGATACAATACTATTTCCGCCAGTGGCTTTCAGGGGTTTGTTGTTG
TATTTGCCTAGCAGTCTTGCCTGTCTGCGTGGTACCTAGTTGATCACAGT
CCCCATAAATTGAGACAGTACTGTCCAGGCGAACGCCCGAAAACAACAGA
TGGAAAGCTAAGAGTAATGGAAGTTCATTTTTTCTTTTGTGTTGTTACTC
GTCACTGTCCATGTGGGGCATACATCGTAAACTAACGAAGGGCTGAGGAA
AGGTTTATGGTCTCCACAGTGCGCTGGAAAGCATTTTTGCGATTGTACCC
GTTTTTGTTTTGTAAAAAATCAAAGATGCGTGGAATAACTATGGCTGTAG
GCGCATGCCGGTGTGCATGTGGTTAGGTCGGAACTACCACAAGTTTTTTA
GCCTCCTAGTTGTATTTTTGATTCGGAGGAATCGGCAGCACTGAGGTACC
ATAGAATGGATGACGGCCATGTACAAACATGTATCGTGAACGCCCTCATT
AGGAGTTGCTTTATGTTTTGGCGAGGTACAAAATGGAATCGTCGTTCGTT
TAAGGAGTGCCTACTTGATATATGCCTCAGACGGAGTAACGAAAGTGTCC
TCGATGTCAACAAACTGTACGTCACGTGCTCATGTCCCCAGACGGAAGAA
CGGGAGAAACGAGCGACGTCCGTTGCATAGCCATGGATGAAGAAAATATG
CAAGTAGCTTTTCAAAGCTTTTAGTTGAAGGTGCACCTTCTAGCCAACAG
CGTAGCCCCTCTCGTACGCTTCACAAGTATTCTAAACGTCCTCGCGAGCG
CGATCTCTTCACC
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Coding sequence (CDS) from alignment at H-paniculata_contig1496:16677..23139-

>mRNA_H-paniculata_contig1496.2947.1 ID=mRNA_H-paniculata_contig1496.2947.1|Name=mRNA_H-paniculata_contig1496.2947.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1368bp|location=Sequence derived from alignment at H-paniculata_contig1496:16677..23139- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTAGCTTTCGTCGGTGTTAATGTTAGCCCTCATGCGCTAGCGACGCA
AGGTTTGTCGTCGCCAAATTCGGCTTTATGGACAAGTGAGACTGGTGCAA
GAACCGCAGGGATTTGTTCCAGCCATCACAGAGAGAGGCGTACCGTGCTG
CCTGCTGTCTCCGAGCTTGTAGGGGCGTCGGAGGAGACCGGCGGCGTATT
CGACCCTATGGGATTTGCCACCGATGAGATGTTAGCTTTCGTCGGTGTTA
ATGTTAGCCCTCATGCGCTAGCGACGCAAGGTTTGTCGTCGCCAAATTCG
GCTTTATGGACAAGTGAGACTGGTGCAAGAACCGCAGGGATTTGTTCCAG
CCATCACAGAGAGAGGCGTACCGTGCTGCCTGCTGTCTCCGAGCTTGTAG
GGGCGTCGGAGGAGACCGGCGGCGTATTCGACCCTATGGGATTTGCCACC
GATGAGGCATCTCTGTATCGGCGACGGGTGGCGGAATTGAAGCACGGCAG
GGTTTGCATGTTGGCTACAGTTGGTGTTATAGTTCAATCGTTCGTTCATC
TACCGGACCCTACTCGGTCGGCGTTCTCCAACACAAGACCACTCGGAGCG
CTGTTTCAGGCATCTCTGTATCGGCGACGGGTGGCGGAATTGAAGCACGG
CAGGGTTTGCATGTTGGCTACAGTTGGTGTTATAGTTCAATCGTTCGTTC
ATCTACCGGACCCTACTCGGTCGGCGTTCTCCAACACAAGACCACTCGGA
GCGCTGTTTCAGGTTTGGCGGGAGCGTCCTCTGATACTTATCGTAATGGT
GGCTTCGATGGGAATCATCGAGCTCACGGTGGGACGGGAGGACTACGGGG
GGTACGATGCGGAGCCTGGGCGGCTTGGAGAGTTTTGGCAGAAGGCTCGA
CCCCGAGAGCCCGTTGTTTGGCGGGAGCGTCCTCTGATACTTATCGTAAT
GGTGGCTTCGATGGGAATCATCGAGCTCACGGTGGGACGGGAGGACTACG
GGGGGTACGATGCGGAGCCTGGGCGGCTTGGAGAGTTTTGGCAGAAGGCT
CGACCCCGAGAGCCCGTTCTTTGGAGGAAACGACAGCTTCAAGAGCTAAA
GCATGGGCGGCTGGCTACACTTGCGATAACAGCTTTGGAGGAAACGACAG
CTTCAAGAGCTAAAGCATGGGCGGCTGGCTACACTTGCGATAACAGGAAT
GCTCGCCCAAGAGTTGGTGACACATGAGGGGCCCGTGGAGCAATTGCTCA
ATGGTCACATCAATCCATTTGATCATTATTAAGAATGCTCGCCCAAGAGT
TGGTGACACATGAGGGGCCCGTGGAGCAATTGCTCAATGGTCACATCAAT
CCATTTGATCATTATTAA
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