mRNA_H-paniculata_contig14930.2936.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14930.2936.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT) HSP 1 Score: 282 bits (721), Expect = 4.430e-85 Identity = 156/425 (36.71%), Postives = 252/425 (59.29%), Query Frame = 1 Query: 1 TSAPVAR-RSMRTVFSLVAEYDFELEGMDVDAAYLNAPVEEELFVKLPSEFPPFSGDIPIVRRLHKSLYGLKQSGRNWNNTLDDFLVGIGLDRSTTNSCLYYSRDDGGETDTLVGVYVDDLVIAGRR-EKVDEFKHSISQRFRTKDLGFLSRVLGIEIRLDRPNGTITTS*GNYIREVLKRYGFDECRGVPTLVEGKVK-ISAPDKGRSGTSTEYGGIVRSLMYASTGTRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLITLPDLGITFGGKSTGHGLEGFVDADWAEDVKDRKSTTGYIFKLNGGAIS*CSRKQQLVMWSSIETEYVAAGEAGKETVYLRGLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTHCKTKHIGMH*QRIREWIREGVLALKYAQAGDQLADILTKGLSRVRFQR 1266 T +PV R S+RTV +L + +L MDV AA+LN +E+E+++K P F G + +L+KSLYGLKQS R WN+ LD+ L IG ++ ++ C+Y +DG +V ++VDD+++AG+ EK+ + K SI++RF+ KD+G L +LG+++ + + + Y ++K+YG + C+ V T V+ K +SA + E+ V SL+Y S+ TRPDI +AV+ A+ +P ++++ KRIFRYL + G+ + ++ GF DADWA D+ DRKST+GY F++NG A+S S+KQ V S+ EYVA A +E +++R LL + T++EDN+SAI +SK H ++KHI + +R+ + + L + Y G LAD+ TKG+ + +F++ Sbjct: 229 TFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFE-VKGKEHLACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGNIF--VVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSELFNKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYS-ENANPDCVGFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAAAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYYFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQFKK 647
BLAST of mRNA_H-paniculata_contig14930.2936.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT) HSP 1 Score: 279 bits (714), Expect = 1.100e-83 Identity = 162/425 (38.12%), Postives = 249/425 (58.59%), Query Frame = 1 Query: 1 TSAPVAR-RSMRTVFSLVAEYDFELEGMDVDAAYLNAPVEEELFVKLPSEFPPFSGDIPIVRRLHKSLYGLKQSGRNWNNTLDDFLVGIGLDRSTTNSCLYYSRDDGGETDTLVGVYVDDLVIAGRRE-KVDEFKHSISQRFRTKDLGFLSRVLGIEIRLDRPNGTITTS*GNYIREVLKRYGFDECRGVPTLVEGKVKIS-APDKGRSGTSTEYGGIVRSLMYASTGTRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLITLPDLGITFGGKSTGHGLEGFVDADWAEDVKDRKSTTGYIFKLNGGAIS*CSRKQQLVMWSSIETEYVAAGEAGKETVYLRGLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTHCKTKHIGMH*QRIREWIREGVLALKYAQAGDQLADILTKGLSRVRFQR 1266 T +PVAR S+RTV +L A++ +L MDV A+LN ++EE+++K F G +V RL +S+YGLKQS R WN+ LD L +G ++T + C+Y +++GGE ++ VYVDD+++AG+ + K++E K +++++F+ KD+G L LG+++ + I Y + VL+R+G + + T V K+ A D + Y V L+Y ST TRPDIAYAV AR DP +++ KRI RYL D+G+ + G T G+ DADWA D+ DRKST+GY+F+++ AIS S+KQ V S+ E EY+A A +E V+L+ LL + G + EDN++AI ++K + H + KHI + IRE + + L+Y + +ADI TKGLS V+F + Sbjct: 65 TFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQTEGFIE-KGKEHLVCRLRRSIYGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMALASATQEAVWLQQLLSDLKSKPTGPMLILEDNQAAICMAKNAQYHGRAKHIDIKYHFIREHVASAAVKLEYCSTEEMIADIFTKGLSVVQFTK 486
BLAST of mRNA_H-paniculata_contig14930.2936.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT) HSP 1 Score: 286 bits (731), Expect = 9.430e-83 Identity = 158/425 (37.18%), Postives = 253/425 (59.53%), Query Frame = 1 Query: 1 TSAPVAR-RSMRTVFSLVAEYDFELEGMDVDAAYLNAPVEEELFVKLPSEFPPFSGDIPIVRRLHKSLYGLKQSGRNWNNTLDDFLVGIGLDRSTTNSCLYYSRDDGGETDTLVGVYVDDLVIAGRR-EKVDEFKHSISQRFRTKDLGFLSRVLGIEIRLDRPNGTITTS*GNYIREVLKRYGFDECRGVPTLVEGKVK-ISAPDKGRSGTSTEYGGIVRSLMYASTGTRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLITLPDLGITFGGKSTGHGLEGFVDADWAEDVKDRKSTTGYIFKLNGGAIS*CSRKQQLVMWSSIETEYVAAGEAGKETVYLRGLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTHCKTKHIGMH*QRIREWIREGVLALKYAQAGDQLADILTKGLSRVRFQR 1266 T +PV R +RTV +L + +L MDV AA+LN +E+E+++K P F G +V +L+KSLYGLKQS R WN+ LD+ L IG ++ ++ C+Y +DG +V ++VDD+++AG+ EK+ + K SI++RF+ KD+G L +LG+++ + + + Y ++K+YG + C+ V T V+ K +SA + EY V SL+Y S+ TRPDI +AV+ A+ +P ++++ KRIFRYL + G+ + ++ GF DADWA D+ DRKST+GY F++NG A+S S+KQ V S+ E EYVA A +E +++R LL + T++EDN+SAI +SK H ++KHI + +R+ + + L + Y G LAD+ TKG+ + +F++ Sbjct: 843 TFSPVVRFEKIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFE-VKGKEHLVCKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGDIF--VVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAIEDSELFNKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYS-ENANPDCVGFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAEAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYHFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQFKK 1261
BLAST of mRNA_H-paniculata_contig14930.2936.1 vs. uniprot
Match: A0A6S7JEY7_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JEY7_PARCT) HSP 1 Score: 273 bits (697), Expect = 1.090e-81 Identity = 159/425 (37.41%), Postives = 246/425 (57.88%), Query Frame = 1 Query: 1 TSAPVAR-RSMRTVFSLVAEYDFELEGMDVDAAYLNAPVEEELFVKLPSEFPPFSGDIPIVRRLHKSLYGLKQSGRNWNNTLDDFLVGIGLDRSTTNSCLYYSRDDGGETDTLVGVYVDDLVIAGRRE-KVDEFKHSISQRFRTKDLGFLSRVLGIEIRLDRPNGTITTS*GNYIREVLKRYGFDECRGVPTLVEGKVKIS-APDKGRSGTSTEYGGIVRSLMYASTGTRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLITLPDLGITFGGKSTGHGLEGFVDADWAEDVKDRKSTTGYIFKLNGGAIS*CSRKQQLVMWSSIETEYVAAGEAGKETVYLRGLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTHCKTKHIGMH*QRIREWIREGVLALKYAQAGDQLADILTKGLSRVRFQR 1266 T +PVAR S+RTV +L A++ +L MDV A+LN ++EE+++K P F G +V RL +S+ GLKQS R WN+ LD L +G ++T + C+Y +++GGE ++ VYVDD+++AG+ + K++E K +++++F+ KD+G LG+++ + I Y + VL+R+G + + T V K+ A D + Y V L+Y ST TRPDIAYAV AR P +++ KRI RYL D+G+ + G T G+ DADWA D+ DRKST+GY+F+++ AIS S+KQ V S+ E EY+ A +E V+L+ LL + G + EDN++AI ++K + H + KHI + IRE + + L+Y + +ADI TKGLS V+F + Sbjct: 213 TFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQPEGFID-KGKEHLVCRLRRSICGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQRHYFLGVKVIQKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSAHPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMTLASATQEAVWLQQLLSDLKSKPTGPMLILEDNQAAICMAKNAQYHGRAKHIDIKYHFIREHVASAAVKLEYCSTEEMIADIFTKGLSVVQFTK 634
BLAST of mRNA_H-paniculata_contig14930.2936.1 vs. uniprot
Match: A0A4Y9ZJA2_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZJA2_9AGAM) HSP 1 Score: 283 bits (723), Expect = 2.170e-81 Identity = 169/424 (39.86%), Postives = 239/424 (56.37%), Query Frame = 1 Query: 1 TSAPVAR-RSMRTVFSLVAEYDFELEGMDVDAAYLNAPVEEELFVKLPSEFPPFSGDIPIVRRLHKSLYGLKQSGRNWNNTLDDFLVGIGLDRSTTNSCLYYSRDDGGETDTLVGVYVDDLVIAGRR-EKVDEFKHSISQRFRTKDLGFLSRVLGIEIRLDRPNGTITTS*GNYIREVLKRYGFDECRGVPTLVEGKVKISAPDKGRSGTSTEYGGIVRSLMYASTGTRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLITLPDLGITFGGKSTGHGLEGFVDADWAEDVKDRKSTTGYIFKLNGGAIS*CSRKQQLVMWSSIETEYVAAGEAGKETVYLRGLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTHCKTKHIGMH*QRIREWIREGVLALKYAQAGDQLADILTKGLSRVRFQR 1266 T APV + S+RT+ +L A++D EL MDV AYLN +EEE++++ P P F GD IV RL KS+YGLKQ+GR W ++ +G RS + ++ D T ++ +YVDD+ A E + + K +S+ F DLG + +LG+E+ DR +T S YI +VL+R+GF + R + T V K+ + +Y V SLMYA GTRPDIAYAV ++ P ++++ R F+YL D + + GK L G+VD+DWA D DR+S +GY+F L G AIS S+KQQ V SS E EY+AA A KE V+LR LL + T L DN+ AI L+K H TKHI + +R+ + +G +A +Y DQ+AD+LTKGLSR + R Sbjct: 978 TFAPVMKFNSLRTLLALTAKHDLELHQMDVKTAYLNGDLEEEIYMEPP---PGFRGDGNIVWRLIKSIYGLKQAGRVWYMRIEREFRDLGYSRSYADYGVFVFHRDSDGTLLIIIIYVDDIGAASNSMEAILQAKARLSKIFEITDLGEMRWILGMEVTRDRALKIVTLSQKRYIADVLERHGFADARPISTPVSVNQKLEKLPAAEI-DARKYQSAVGSLMYAMLGTRPDIAYAVGLLSQHSSAPGAEHWNVAARTFKYLRRTADYQLVYNGKRKNDELTGYVDSDWANDPNDRRSISGYVFTLAGAAISWSSKKQQSVAQSSTEAEYMAAAHATKEAVWLRMLLSDLRQPIERPTPLLIDNQGAIALAKNPAYHACTKHIDVRHHFLRDKVEDGTIAAEYIPTADQVADVLTKGLSREKHDR 1397
BLAST of mRNA_H-paniculata_contig14930.2936.1 vs. uniprot
Match: A0A7M6DPI8_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DPI8_9CNID) HSP 1 Score: 281 bits (718), Expect = 6.620e-81 Identity = 159/427 (37.24%), Postives = 245/427 (57.38%), Query Frame = 1 Query: 7 APVAR-RSMRTVFSLVAEYDFELEGMDVDAAYLNAPVEEELFVKLPSEFPPFSGDIP-IVRRLHKSLYGLKQSGRNWNNTLDDFLVGIGLDRSTTNSCLYYSRDDGGETD--TLVGVYVDDLVIAGRREKV-DEFKHSISQRFRTKDLGFLSRVLGIEIRLDRPNGTITTS*GNYIREVLKRYGFDECRGVPTLVEGKVKISA-PDKGRSGTSTEYGGIVRSLMYASTGTRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLITLPDLGITFGGKSTGHGL-EGFVDADWAEDVKDRKSTTGYIFKLNGGAIS*CSRKQQLVMWSSIETEYVAAGEAGKETVYLRGLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTHCKTKHIGMH*QRIREWIREGVLALKYAQAGDQLADILTKGLSRVRFQR 1266 APVA+ S+R+V ++ E D EL MDV A+LN +EE++F+K P F + D P + +L KS+YGLKQS R WN +D+FL G R+ + C+Y+ + G+ +V VYVDDL+IA ++ E K + +RF +D + +LG++++ DR N +T ++ VL R+ +EC+ V T +E +K D +Y + L YAS GTRPDI+ AV ++ M P ++++ KR+ RYL D G+ + G +G L GF DADWA D+ RKST+GY+FK+ +S S++Q +V S E EYVA +A +E ++LR L + F T +FEDN+ AI L+K H +TKHI + +R+ + + V+ L+Y + +AD+LTKGL R +F++ Sbjct: 861 APVAKYNSIRSVLAITNELDLELHQMDVKTAFLNGDLEEDIFMKQPEGF--INRDNPNMACKLQKSIYGLKQSARCWNEKMDEFLKESGFTRNDADPCIYHKQITKGDKSFTLIVAVYVDDLLIACNNIQILREQKQKLGERFEMEDKSEVHFILGMQVKRDRKNRRLTIDQNAFLSSVLNRFNMNECKPVATPLEPSMKFEKLADDEEIVKLKDYQSAIGCLTYASIGTRPDISAAVGVLSQHMSKPGKQHWIGVKRVLRYLKGTLDYGLIYEGSESGDILLHGFADADWAGDIDTRKSTSGYVFKVGNSTVSWKSKRQSIVALSKTEAEYVALSQATQEVIWLRTLFKGMDFEQTDPTKMFEDNQGAIELAKNQPNHSRTKHIDIKFHHVRDAVAKKVIDLEYCPTDEMIADLLTKGLPRPQFEK 1285
BLAST of mRNA_H-paniculata_contig14930.2936.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM) HSP 1 Score: 268 bits (685), Expect = 6.850e-81 Identity = 162/432 (37.50%), Postives = 241/432 (55.79%), Query Frame = 1 Query: 1 TSAPVAR-RSMRTVFSLVAEYDFELEGMDVDAAYLNAPVEEELFVKLPSEFPPFSGDIPIVRRLHKSLYGLKQSGRNWNNTLDDFLVGIGLDRSTTNSCLYYSRDDGGETDTLVGVYVDDLVIAGRREKVDEFKH---SISQRFRTKDLGFLSRVLGIEIRLDRPNGTITTS*GNYIREVLKRYGFDECRGVPTLVEGKVKI------SAPDKGRSGTSTEYGGIVRSLMYASTGTRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLITLPDLGITFGGKSTGHGLEGFVDADWAEDVKDRKSTTGYIFKLNGGAIS*CSRKQQLVMWSSIETEYVAAGEAGKETVYLRGLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTHCKTKHIGMH*QRIREWIREGVLALKYAQAGDQLADILTKGLSRVRFQR 1266 T APVA+ S+R + +L A +D+EL MDV AYLN +EEE+F+K P FP G V L K +YGLKQ+GR W L + +G RS+ + +++ GE +V V VDDL IA VDE H ++ +F DLG + +LG+EI+ DR TI+ YI +L R+ + + + T ++ + S P + + Y + SLMYA+ GTRPD++YAV ++ M++P ++ KR+ RYL + +T+GG + +G+EGF DADW R+S +GY+F ++GGA+S S+KQ +V SS E EYVA A KE ++ R LG I TTL+ DN+SAI L+K + H +TKHI + IR+ + G + + Y D AD+LTK L+R + ++ Sbjct: 113 TFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGFPT-PGQEQKVCHLFKPIYGLKQAGRRWYKKLCAAFLDMGFARSSVDHSVFFRHGPNGEI-AIVAVSVDDLAIAAN--SVDEMSHIKSALKLKFEMTDLGEIHWLLGLEIKRDRRGRTISMLQRAYIDTILSRFNLQDAKSLTTAIDPSFSLTTDQSPSTPQQYDDMRNILYREAIGSLMYAAIGTRPDVSYAVTALSQFMQNPGHPHWEAAKRVMRYLKGTKEEWLTYGGDNA-NGMEGFSDADWGSS-DHRRSISGYVFLIDGGAVSWSSKKQPIVALSSTEAEYVAMTHAAKEVLWTRAFLGEIISPFDKPTTLYADNQSAITLAKDNLYHARTKHIAIRFHFIRDIVERGEVDIVYCPTADMAADVLTKPLTRPKMEK 538
BLAST of mRNA_H-paniculata_contig14930.2936.1 vs. uniprot
Match: A0A060S825_PYCCI (CCHC-type domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060S825_PYCCI) HSP 1 Score: 280 bits (717), Expect = 1.680e-80 Identity = 173/428 (40.42%), Postives = 249/428 (58.18%), Query Frame = 1 Query: 1 TSAPVAR-RSMRTVFSLVAEYDFELEGMDVDAAYLNAPVEEELFVKLPSEFPPFSGDIPIVRRLHKSLYGLKQSGRNWNNTLDDFLVGIGLDRSTTNSCLYYSRDDGGETDTLVGVYVDDLVIAGRREKVDEFKHSISQRFRTKDLGFLSRVLGIEIRLDRPNGTITTS*GNYIREVLKRYGFDECRGVPT-LVEGKVKI-----SAPDKGRSGTSTEYGGIVRSLMYASTGTRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLITLPDLGITFGGKSTGHGLEGFVDADWAEDVKDRKSTTGYIFKLNGGAIS*CSRKQQLVMWSSIETEYVAAGEAGKETVYLRGLLGSIGFG--CRGSTTLFEDNKSAINLSKGSGTHCKTKHIGMH*QRIREWIREGVLALKYAQAGDQLADILTKGLSRVR 1257 T APVA+ S+RT+ +L A YD+ELE M+V +AYLN ++EE++++ P P +G +V L K+LYGLKQ+GR W TL + + +G R ++ ++Y R G++ +V VD L IAG R+ V +FK +IS RF DLG + +LGIE++ DR TI S YI V R+ + V T L G V S P + ++ Y V SLMYA GTRPDIA+AV ++ M++P R ++ KR+ RYL+ +L + +G ++ G++GF DADW + R S +GY+F L+GGAIS S+KQ +V SS E EY+A A KE ++LR LL I R TLF DN+SAI L+K + H +TKHI + IRE + + + L++ + D AD+ TK L R R Sbjct: 1047 TFAPVAKLSSIRTILALAARYDWELEQMEVKSAYLNGRLDEEIYMRQPPGSAP-AGLEHLVCCLKKTLYGLKQAGRGWYKTLSNRMAEMGFTRCASDHAVWYKR--AGDSIVIVASSVDHLTIAGTRDFVMDFKSAISARFEMSDLGAMRWILGIEVQRDRQARTIAISQRTYIDTVAARFNLETANPVSTPLQPGGVLTRSQSPSTPHQVADMSNVPYREAVGSLMYAVMGTRPDIAFAVTTLSQFMQNPGRAHWEAVKRVIRYLVGTRELWLVYG--TSDDGIQGFSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHAAKEALWLRYLLSDIIHPDISRYPLTLFSDNRSAIALAKDNAFHPRTKHIDIRFHFIREAVDDEKIILQHRRTEDMPADLFTKALPRSR 1469
BLAST of mRNA_H-paniculata_contig14930.2936.1 vs. uniprot
Match: A0A2P6P3Z1_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6P3Z1_ROSCH) HSP 1 Score: 265 bits (677), Expect = 3.060e-80 Identity = 160/427 (37.47%), Postives = 231/427 (54.10%), Query Frame = 1 Query: 4 SAPVARRSMRTVFSLVAEYDFELEGMDVDAAYLNAPVEEELFVKLPSEFPPFSGDIPIVRRLHKSLYGLKQSGRNWNNTLDDFLVGIGLDRSTTNSCLYYSRDDGGETDTLVGVYVDDLVIAGR-REKVDEFKHSISQRFRTKDLGFLSRVLGIEIRLDRPNGTITTS*GNYIREVLKRYGFDECRGVPTLVEGKVKISAPDKGRSGTSTE------YGGIVRSLMYASTGTRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLITLPDLGITFGGKSTGHGLEGFVDADWAEDVKDRKSTTGYIFKLNGGAIS*CSRKQQLVMWSSIETEYVAAGEAGKETVYLRGLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTHCKTKHIGMH*QRIREWIREGVLALKYAQAGDQLADILTKGLSRVRFQ 1263 S V S+R + S+ A+YD E+E MDV A+L+ +EE++++ P F +G +V RL KSLYGLKQS R W D +++ IG R + C+YY + GE L+ +YVDD++IA + K++E K + F KDLG +LGIEIR DR G I S YI VL+R+ D + V + ++SA + S + Y V LMYA TRPD+A A+ ++ M +P + ++ K I RYL LGI F K + GFVDAD+A D+ R+STTGY+F GG +S S Q + S+ E EY+A EA KE ++L GL G G D++SAI+L+K H +TKHI + RIR+W+ G + ++ D AD LTK ++ +F+ Sbjct: 68 SPVVKHTSIRLLLSIAAQYDMEIEQMDVKTAFLHGDLEEDIYMSQPEGFVE-TGKEDLVCRLRKSLYGLKQSPRQWYKRFDTYMLKIGYTRCLYDCCVYYHVFEDGEIILLL-LYVDDMLIACKDMSKIEELKKKLGAEFDMKDLGAAQNILGIEIRRDRKAGKIWLSQEKYILRVLERFNMDGAKVVSIPLAAHYQLSAKQRPSSQKEIDAMKDVPYASAVGCLMYAMICTRPDLAQALSVVSKYMSNPGKPHWEAVKWILRYLKGTRQLGIMFERKQEVACVAGFVDADYAGDLDKRRSTTGYVFTCGGGPVSWKSTLQAVTALSTTEAEYMALTEASKEAIWLNGLASEFGIHQEGVVVKC-DSQSAIHLAKNQVFHARTKHIDVRYHRIRDWVESGNIIVEKVHTNDNAADCLTKPVAVEKFK 491
BLAST of mRNA_H-paniculata_contig14930.2936.1 vs. uniprot
Match: W7TJ26_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ26_9STRA) HSP 1 Score: 270 bits (691), Expect = 3.620e-80 Identity = 169/430 (39.30%), Postives = 246/430 (57.21%), Query Frame = 1 Query: 1 TSAPVARRS-MRTVFSLVAEYDFELEGMDVDAAYLNAPVEEELFVKLP---SEFPPFSGDIPIVRRLHKSLYGLKQSGRNWNNTLDDFLVGIGLDRSTTNSCLYYSRDDGGETDTLVGVYVDDLVIAGR-REKVDEFKHSISQRFRTKDLGFLSRVLGIEIRLDRPNGTITTS*GNYIREVLKRYGFDECRGVPTLVEGKV-KISAPDKGRSGTSTEYGGIVRSLMYASTGTRPDIAYAVHQAARRMEDPCRKYFSTCKRIFRYLITLPDLGITFGGKSTGH-GLEGFVDADWAEDVKDRKSTTGYIFKLNGG----AIS*CSRKQQLVMWSSIETEYVAAGEAGKETVYLRGLLGSIGFGCRGSTTLFEDNKSAINLSKGSGTHCKTKHIGMH*QRIREWIREGVLALKYAQAGDQLADILTKGLSRVR 1257 T APVA + +R V +L D EL+ MDVD AYL + +EE++++K P ++ P G+ +V RL KSLYGLKQSGRNW+ +D + G GL S + CLY GE +V +YVDDL+I R D+FK IS+ F KDL L +LG+ I+ +R N T+ S YI +L ++G +C+ V T +EG + K+ D EY +V SL+YA+ TRPDIA+AV + ++ ++++ KR+ RYL D+G+ + G STG L G+ DAD+A D +R+ST+GY F L+ G I +++Q +V SS E+E ++A A + VY+R LL +GF T + EDN++ I + TH +TKHI + +RE + + L Y QLADILTK LS +R Sbjct: 277 TYAPVASMTTIRLVLALACILDLELDNMDVDTAYLQSDLEEKVYIKQPPGYEKYGPNGGE--LVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGLHPSYADPCLYVKFASSGEILVIV-LYVDDLIIGSNSRTMTDKFKQDISREFSMKDLKELDWILGMGIKRNRENRTMEISQTGYIGMMLNKFGMADCKSVLTPMEGTLTKMDGKDVK---PDNEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNKEHWIAAKRVLRYLKGTRDVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYTFTLSHGDDVNTIDWKAKQQDVVALSSAESELISACSATQNAVYIRQLLMDLGFKQDEPTVIMEDNQACIAMGNNPITHKRTKHIDVRYHFVREKVESKEVELVYIPTQHQLADILTKPLSSIR 700 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14930.2936.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14930.2936.1 >prot_H-paniculata_contig14930.2936.1 ID=prot_H-paniculata_contig14930.2936.1|Name=mRNA_H-paniculata_contig14930.2936.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=160bp MRTVFSLVAEYDFELEGMDVDAAYLNAPVEEELFVKLPSEFPPFSGDIPIback to top mRNA from alignment at H-paniculata_contig14930:3444..4787+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14930.2936.1 ID=mRNA_H-paniculata_contig14930.2936.1|Name=mRNA_H-paniculata_contig14930.2936.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1344bp|location=Sequence derived from alignment at H-paniculata_contig14930:3444..4787+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14930:3444..4787+ >mRNA_H-paniculata_contig14930.2936.1 ID=mRNA_H-paniculata_contig14930.2936.1|Name=mRNA_H-paniculata_contig14930.2936.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=960bp|location=Sequence derived from alignment at H-paniculata_contig14930:3444..4787+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |