Homology
BLAST of mRNA_H-paniculata_contig14913.2929.1 vs. uniprot
Match:
D7FLE7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLE7_ECTSI)
HSP 1 Score: 173 bits (439), Expect = 2.530e-41
Identity = 161/414 (38.89%), Postives = 203/414 (49.03%), Query Frame = 3
Query: 999 ATGFRFQSPLAFVPPACPSRPG-----------GAXXXXXXXXXXXXNNWNRGKPAFGFDSEDDCSSVDALEQ----------------------LEGSKFVD----------PGWRNS--SGNPSASARAGRGELGGLVLQTQTRGEWGLR----------GGIDGASPDRDRLMTPRSPSTPAASVASASPAASE---SSTLSGRRLSAEKRQFLMKMHMLESSGSTIASSAQSSSNKSLLATDSAKSSLADPSXXXXXXLTDQDLSERLSSKIGRWIYVDWLEWMGDIMGAPAGRISCPSSGCGVELGSWSWER-SSDPMRAPTGPPLIVMEKTTVKATSYILSHYDS-RNSLSRDNTPRSSPTSAKRIEAASKASPPESGAGGSSVN----RRSSGILESKLAALAPQQQ 2048
A R QSPL F P RP G XXXXX + R P F F+SEDD S+VD E+ GS + PGW + SG SA R R G T GE+ L G++ SP LMTPRSP TPA S S SP AS+ S++LS R SAEKRQFLM+M+ +ES T+A++ PS T+ S GRW++VD L+WMGDIM AP G I CPSSGCGVELG+WSWE+ + +++PTGPPLI ++K +K TSY+ S DS R+SLSRDNTP+SSP ++ A+ P G+ GS++ RRSSGILES+LA L+ Q
Sbjct: 447 AEAIRLQSPLGFTPSPSRLRPWAAGRCSSGTATGXXXXXXCAGDSRCGDGQRNSPVFAFESEDDSSNVDPFEREGEGTLAEAYPVAVDAIYTASGSGGSGVISVGSGXGGMSYPGWEGAVGSGGGSAGCRRLRRATGTPTNATLQSGEFNLMLSSKVPLSAGSGMESVSP----LMTPRSPRTPA-SCGSTSPCASDGSFSNSLS-RPQSAEKRQFLMRMNQMESR--TLATTGP-------------------PSFPD----TESQNERPTSRPGGRWLHVDLLDWMGDIMVAPTGHICCPSSGCGVELGNWSWEKPEAAGLKSPTGPPLIRLDKALIKNTSYMRSQLDSSRSSLSRDNTPKSSPCAS--------ANSPSKGSPGSALPESDLRRSSGILESRLAGLSASPQ 821
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14913.2929.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 1
0 1 Expect = 2.53e-41 / Id = 38.89 Sequence D7FLE7_ECTSI
Match Name E-value Identity Description
D7FLE7_ECTSI 2.530e-41 38.89 Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 172.9 Seed ortholog evalue 4.6e-40 Seed eggNOG ortholog 2880.D7FLE7 Hectar predicted targeting category other localisation EggNOG free text desc. phosphatase EggNOG OGs COG2453@1,KOG1716@2759 COG Functional cat. T Best tax level Eukaryota Best eggNOG OG NA|NA|NA Exons 5 Model size 2393 Cds size 1890 Stop 1 Start 1
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14913.2929.1
>prot_H-paniculata_contig14913.2929.1 ID=prot_H-paniculata_contig14913.2929.1|Name=mRNA_H-paniculata_contig14913.2929.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=630bp
MLLPHPTYGLLSGSGDRISTTPPPPPLPPPDQLFEEAKYAASSTTTTSLS back to top mRNA from alignment at H-paniculata_contig14913:746..5433-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig14913.2929.1 ID=mRNA_H-paniculata_contig14913.2929.1|Name=mRNA_H-paniculata_contig14913.2929.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4688bp|location=Sequence derived from alignment at H-paniculata_contig14913:746..5433- (Halopteris paniculata Hal_grac_a_UBK monoicous)AGCCGCGACCCACGCGGTTTCGGCTGTGCAGGCCTGGTTCCGCTTCGATT
CAAGTCATCCCGCCGCTTAAGTCGCTCGAACGAATATATGCCTGCCGGAG
CTGCGGCTGTTTTCTGTTTACGGGTGGACACGTAATCAAG GTGACCGACG
GACCGACTGGGTCATGACATGCGGGTTGTCGGTTTTGGGGAAACATTCGG
CGTTCTTCGTGGTTGTGACTGGTCTAATGTTTCAGCGGGTACTGGTCATG
GTACCGACCCACCCTATCGGAGGACTCTGGTTGGAGATAATTTAGTTTAG
GGGCTGTTTCGAAGTGGATATATATAGCATTGGTGTTTGAAAACATTTAT
TGGCTGTTCGCGGCTGAGATCTGCACGAATTTGTTCGCGACCTTCCATGT
GAATGAGAACGAGTCTATGGTAGCCACCCTCGTGGCGAAGGCGCACCGCT
TGTCCCGTCAAGTACTCTCAGTTAGCTGTTACAGAGTAATAGTATCATAC
AGGCATGGAGCTGCTCGTTCCCCCTACCTCCCTGCCCAGACCAACCCATA
CAACCACAGTCGTCTTACGTCGTCATCCAGCTGGCAAATACATGTGACAT
GTATCCTGTATCCTGTAACTCGTGCCCTCCTTTTGCCTTAATCGGGTTGT
TCCTTCGGGCCATAACTGACGACAGATCAACATCGACCTACCGAGCATAA
ATACAATCCTAGCGCACACCTCCCCAGGCAGCCCTGCGCACGAGCGCCAT
CTCTCTCCAGAGGGCGCGGCGACGCCGCCATCCACTACTAGCGCGTCAGC
CGTGGCGGTCGTCACCACTTTGTCCTCGTCCACCCCTTCCCCGAAAACCA
CCCCGCCGCCGCGAACAACACCACCACCCATCGTCCATGGGCCCGCGACT
ATCGGGACCCCACCACAGGCAGGGACT ATGTTGCTGCCTCACCCCACCTA
CGGTCTCCTCTCTGGAAGCGGGGACCGAATTTCCACGACCCCGCCCCCAC
CGCCGCTGCCCCCTCCGGATCAATTATTCGAGGAAGCGAAGTACGCAGCG
TCGTCCACGACCACCACCAGCCTCTCCGCGTCCCGTTGGAAGCGGCCCGG
TTCGGCACTTGAGAACGGTGCGCTTGTCATTGGTGGCGCGGGATTATCTG
GGGAGTTCCAGCTGGAGAGGCCGCCAGCACATCTCGGGCGGTGGCCCAGT
GTACCCCCTGAGGACGCCGCGTCGCCAGATCCGGCGATGACGCGAGGGCG
CTCGGCGGGGGGAGACGCGGATGCTGGAGCGACGTTGGTGACAAGCCGCC
GGATGGAGCAAGGGGAGTTCCAGCTGGAGAGACCGCCCGCCCACTTGGGC
AGATGGCCGGAGGTGATACCCGGGAAAAATGCGGTGGGGATGGTGGGATT
GCTCGGGACGGCGAGCAGTAGCAGTAGTGTGTGCGAGCGGGGCGAGCGAG
GCGGCCGGGGGGGGTCGTCCTATCGCACGGCGCCGCCGAGTTCGGCGCCG
GACTCGGTGGTGTCTACGCACGCGCGATCCACGGCAACGGGGTTTAGGTT
TCAGTCGCCGTTGGCGTTTGTTCCTCCGGCTTGTCCCTCACGACCCGGAG
GGGCAGCGGGAGGAGGAGGAGGAGGAGGAGCGGGCAACAGCAATAACTGG
AATCGGGGTAAGCCGGCGTTCGGGTTCGACAGTGAGGACGACTGCAGCTC
GGTGGACGCGTTGGAGCAGCTGGAGGGCAGTAAGTTCGTCGATCCCGGCT
GGCGGAATAGCAGCGGTAACCCGTCCGCTTCGGCGAGAGCGGGAAGAGGG
GAGTTGGGTGGCTTGGTCCTGCAGACGCAAACCCGCGGGGAGTGGGGGTT
GCGCGGGGGGATTGATGGCGCTAGCCCGGATAGGGATAGGTTGATGACGC
CGCGATCTCCGAGCACGCCAGCAGCGTCGGTCGCGAGCGCGAGTCCAGCT
GCTTCTGAGAGCTCGACGCTGTCGGGGAGGCGTTTGTCGGCTGAAAAGCG
TCAGTTCCTCATGAAG GTGAGTTGGCCTGTCAATGGTTTTGGTTTGGACA
TTTGGTCCTGGGAGGGCGAGGGGGGGAGGGGGTTAGCATTGTTTTTGTTT
GAATGCGGATGGATGCCCCGCTGATTGTTGTAGAGCTTGAGGTGTTGGGT
TTGATCGAAACGGACCCTTAAACGTGCTGTCAAATTTGGGTGTGTTGATG
TCCAGCGAGTTGCAATGTTTTTGTGCCTTTGACGTCACGAATCTGTAGCC
AAGTAGTAAGAGGATTGTGCCGTGACAAAACGAAAAATAGATATCAATGG
TGGGTACAAACAATCAGGCAACTCAAAGCTGACACACACGGTACTTGATA
TCCACGCACATGGTCATTGAATTATGAACCCACAGCAAATCTCGTCGTCT
TCGGGAACTATATAGAAATTCCCACAGAAGCCAGCCACTGGACCGACAGA
TGATACTTGAATGTTCAATACCATGCACCCCCTCCGCTATTTTTTCGGGG
GAGGGGTTCTATCTAATTTATCCTTGTGAACGAAAAATTTCCAACCTCCC
CCCCCCCCTCTCCGCCCCCGCCCGCCCGCCCGCCCCGAAAAACGTAGATG
CACATGTTGGAGTCTTCGGGGTCAACCATAGCATCTTCCGCGCAGTCGAG
CAGCAACAAATCCCTGTTGGCGACGGATAGCGCGAAATCTTCACTTGCGG
ATCCCTCCAGCAGTAACAAATCTTTGCTAACGGATCAGGACTTGTCGGAG
CGACTCAGCTCCAAGATCGGGAGGTGGATATACGTGGATTGGTTAGAGTG
GATGGGAGACATAATGGGGGCGCCCGCGGGTCGCATCAGCTGCCCAAGCT
CTGGCTGCGG GTGCGTGTATTTCGTGCTTTAGAGTTCTGATTGTTTTTCC
TGTGGTTGAGGCCTTTTCGTTGGAGCGGATAACTCCCTGTGTGCATGCGT
TGGGTTAGGGTATCTGCCAGGGGTGCTAGCATGTTTGCTGCGATCGTTGT
CATGAATTAGTATGATTTCGGCCACACATCAAAGCACTTTCGCTAATCGC
TGATGATATGGCGAGTGATGACCCTAGGCTCAACATGAGGCATATCGGAA
TTAGACCAACAACGGTGATCTCCATGAATTTACTCTTGCACAGAAGAGAG
ACGTTGGTAAAACACAATTATCAGTGAAAATCTCTCCTATTTCGCTAAAT
GGTACTCGAGTTTTTTCCCCCGCTTGTCCTCGTATGTAGTGTCTATTGCG
AGCCCTACATGATCCGTGACCAATGGGGGACTAGGTCATGATCCATACTC
AATGTTCACTTGCTCAGTATATATATTTCGTCGTAGATGTCAAAGATTTC
GGAATAAAAGGCGCGTGGGGCATTATTCTCGCCCTCCCTTGCTCACACCC
CCCGACTGGAATTCCACGTCTGACTGATGGTCGGAATCCCATGCTTACCT
CATACTGCTGGGAACGGTTTTGTTGAAGAGTGGAGCTGGGAAGCTGGTCG
TGGGAGCGAAGTTCGGACCCGATGCGCGCGCCGACAGGTCCACCCTTGAT
TGTGATGGAGAAGACCACGGTCAAAGCGACAAG GTACAGCAAAATTCCTC
AAGATATCGTACTCGGAAACGAAATACAGAAAGCGCAGGAGCTATGTATG
GTGTGTGGAAGGGCGAGGGGGAAGGGTGTCGGGTTCACACGGCCCGTTTG
CTGTTGTACTCGGTGAGGCCGAAAGGAGCGTCTGTTTTATCGATCTCAAG
TTTGATTGGGAAGTCTTCGATCCCGGCCCTATTTGGGTGGTGGATTGGAG
CGAGTTTTATGTGTATATGTATCTATGTCTGACTGACTGGCTGGCCACTT
GACGACTTGACAAGCTTAGAGGTCGCACGTGTTGCGTTGTTGAATATGAG
GTACAATGCTTTCCTGTCGGCCCACTCCACCCCAACCCTTCCCCCCGAGC
GGTACTCGAATTGGTTGCTTGCAGATATCTTTTCAGAAATGGCAAACACA
GACACACATACAGACTCAAACCTACACCATGAACAGTCTCTCATGGTATC
TGTTTATTTCTTGTGCAAGCGCGCTTCCTTCCCCCCTTTCTCCATACATG
CTCTTTTCTTACCCTCATCTTCTCTCACGTGCCCCGTGACACAGCTACAT
ACTTTCGCATTACGACAGCCGCAATAGTCTCAGCCGAGATAACACGCCAC
GGAGCTCGCCGACTTCAGCCAAGCGGATCGAGGCTGCCAGTAAGGCCTCG
CCGCCTGAGTCAGGGGCGGGGGGGAGTAGCGTCAATCGACGGTCGTCTGG
CATTTTAGAGAGCAAGCTGGCCGCGCTCGCGCCGCAGCAGCAAAAGCAAG
CCCAGAGTCAACGACAAAAACAGCAACCTCGACAACGACAGCAGCAGTTT
CAACAGGCGGAACGCAAGGAGAGAGAACCAGCACCACCGGGGGAGGGACG
GGGTGGCGGCTTTTCGCGATCTCTGGAGCAACAGGGCCGCCAACAGCCGT
GTCGAGGGTCTTCCTCTTCGTCCGTCAACAACGAGGACGGTAGCCAGGCA
GGCAGACGTTCGTCGCATCGGAGCTAG CAGCAGCAGCAGTCTCAGGACAA
AGACATCGCGTTCAGGTTGCTGCGCGCCCTTCTGTGACCTACCTTACTTA
CGCTGGATAGTAGTAGTATAGTGGTACTAAAATCTCCG back to top Coding sequence (CDS) from alignment at H-paniculata_contig14913:746..5433-
>mRNA_H-paniculata_contig14913.2929.1 ID=mRNA_H-paniculata_contig14913.2929.1|Name=mRNA_H-paniculata_contig14913.2929.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3780bp|location=Sequence derived from alignment at H-paniculata_contig14913:746..5433- (Halopteris paniculata Hal_grac_a_UBK monoicous) back to top