prot_H-paniculata_contig14913.2929.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14913.2929.1
Unique Nameprot_H-paniculata_contig14913.2929.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length630
Homology
BLAST of mRNA_H-paniculata_contig14913.2929.1 vs. uniprot
Match: D7FLE7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLE7_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 4.180e-42
Identity = 161/414 (38.89%), Postives = 203/414 (49.03%), Query Frame = 0
Query:  203 ATGFRFQSPLAFVPPACPSRPG-----------GAXXXXXXXXXXXXNNWNRGKPAFGFDSEDDCSSVDALEQ----------------------LEGSKFVD----------PGWRNS--SGNPSASARAGRGELGGLVLQTQTRGEWGLR----------GGIDGASPDRDRLMTPRSPSTPAASVASASPAASE---SSTLSGRRLSAEKRQFLMKMHMLESSGSTIASSAQSSSNKSLLATDSAKSSLADPSXXXXXXLTDQDLSERLSSKIGRWIYVDWLEWMGDIMGAPAGRISCPSSGCGVELGSWSWER-SSDPMRAPTGPPLIVMEKTTVKATSYILSHYDS-RNSLSRDNTPRSSPTSAKRIEAASKASPPESGAGGSSVN----RRSSGILESKLAALAPQQQ 552
            A   R QSPL F P     RP            G XXXXX        +  R  P F F+SEDD S+VD  E+                        GS  +           PGW  +  SG  SA  R  R   G     T   GE+ L            G++  SP    LMTPRSP TPA S  S SP AS+   S++LS R  SAEKRQFLM+M+ +ES   T+A++                     PS       T+       S   GRW++VD L+WMGDIM AP G I CPSSGCGVELG+WSWE+  +  +++PTGPPLI ++K  +K TSY+ S  DS R+SLSRDNTP+SSP ++        A+ P  G+ GS++     RRSSGILES+LA L+   Q
Sbjct:  447 AEAIRLQSPLGFTPSPSRLRPWAAGRCSSGTATGXXXXXXCAGDSRCGDGQRNSPVFAFESEDDSSNVDPFEREGEGTLAEAYPVAVDAIYTASGSGGSGVISVGSGXGGMSYPGWEGAVGSGGGSAGCRRLRRATGTPTNATLQSGEFNLMLSSKVPLSAGSGMESVSP----LMTPRSPRTPA-SCGSTSPCASDGSFSNSLS-RPQSAEKRQFLMRMNQMESR--TLATTGP-------------------PSFPD----TESQNERPTSRPGGRWLHVDLLDWMGDIMVAPTGHICCPSSGCGVELGNWSWEKPEAAGLKSPTGPPLIRLDKALIKNTSYMRSQLDSSRSSLSRDNTPKSSPCAS--------ANSPSKGSPGSALPESDLRRSSGILESRLAGLSASPQ 821          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14913.2929.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLE7_ECTSI4.180e-4238.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14913contigH-paniculata_contig14913:857..4506 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14913.2929.1mRNA_H-paniculata_contig14913.2929.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14913 746..5433 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14913.2929.1 ID=prot_H-paniculata_contig14913.2929.1|Name=mRNA_H-paniculata_contig14913.2929.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=630bp
MLLPHPTYGLLSGSGDRISTTPPPPPLPPPDQLFEEAKYAASSTTTTSLS
ASRWKRPGSALENGALVIGGAGLSGEFQLERPPAHLGRWPSVPPEDAASP
DPAMTRGRSAGGDADAGATLVTSRRMEQGEFQLERPPAHLGRWPEVIPGK
NAVGMVGLLGTASSSSSVCERGERGGRGGSSYRTAPPSSAPDSVVSTHAR
STATGFRFQSPLAFVPPACPSRPGGAAGGGGGGGAGNSNNWNRGKPAFGF
DSEDDCSSVDALEQLEGSKFVDPGWRNSSGNPSASARAGRGELGGLVLQT
QTRGEWGLRGGIDGASPDRDRLMTPRSPSTPAASVASASPAASESSTLSG
RRLSAEKRQFLMKMHMLESSGSTIASSAQSSSNKSLLATDSAKSSLADPS
SSNKSLLTDQDLSERLSSKIGRWIYVDWLEWMGDIMGAPAGRISCPSSGC
GVELGSWSWERSSDPMRAPTGPPLIVMEKTTVKATSYILSHYDSRNSLSR
DNTPRSSPTSAKRIEAASKASPPESGAGGSSVNRRSSGILESKLAALAPQ
QQKQAQSQRQKQQPRQRQQQFQQAERKEREPAPPGEGRGGGFSRSLEQQG
RQQPCRGSSSSSVNNEDGSQAGRRSSHRS*
back to top