mRNA_H-paniculata_contig14881.2909.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14881.2909.1 vs. uniprot
Match: H3G557_PHYRM (Uncharacterized protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G557_PHYRM) HSP 1 Score: 157 bits (397), Expect = 5.600e-45 Identity = 81/187 (43.32%), Postives = 117/187 (62.57%), Query Frame = 1 Query: 7 YRGMVESLMHASTGTRPDVAYAVHQAARRMEDPCREDFSTCKRILRYLNTVRNLGITFDGKSNGHGLEGFVDADWAEHVQDRKFTTGYVFKLNSGARSWCSRKQQLVTWSGTEAEYVAAGEEGKETVYLRD*LGSIGFGCRGSTTLFEDNKSAIYLGKGSGAHCRIKHIEVRWHGIREWIREGVLAL 567 YR +V +LM+ +T TRPD+A AV + A+ E + KRIL+YL T ++LG+ F+G + G L G+ DA+WA + R+ TTGYVF LN A SW S++Q V S TEAEY+A +E V+LR L +G C G+TT+F+DN+ I L K H R KHI++++H +RE + + V+ L Sbjct: 35 YRELVGALMYLATCTRPDIAQAVGEVAKFCEWYNKSHRVAAKRILKYLKTTQDLGLVFNGGTKGE-LIGYADANWAGDLDSRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVL 220
BLAST of mRNA_H-paniculata_contig14881.2909.1 vs. uniprot
Match: H3GB69_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB69_PHYRM) HSP 1 Score: 158 bits (400), Expect = 2.020e-44 Identity = 81/187 (43.32%), Postives = 117/187 (62.57%), Query Frame = 1 Query: 7 YRGMVESLMHASTGTRPDVAYAVHQAARRMEDPCREDFSTCKRILRYLNTVRNLGITFDGKSNGHGLEGFVDADWAEHVQDRKFTTGYVFKLNSGARSWCSRKQQLVTWSGTEAEYVAAGEEGKETVYLRD*LGSIGFGCRGSTTLFEDNKSAIYLGKGSGAHCRIKHIEVRWHGIREWIREGVLAL 567 YR +V +LM+ +T TRPD+A AV + A+ E + + KRIL+YL T ++LG+ F+G + G L G+ DA+WA + R+ TTGYVF LN A SW S++Q V S TEAEY+A +E V+LR L +G C G+TT F+DN+ I L K H R KHI++++H +RE + + V+ L Sbjct: 94 YRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGE-LIGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTFFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVL 279
BLAST of mRNA_H-paniculata_contig14881.2909.1 vs. uniprot
Match: H3GB17_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB17_PHYRM) HSP 1 Score: 156 bits (395), Expect = 9.780e-43 Identity = 80/187 (42.78%), Postives = 116/187 (62.03%), Query Frame = 1 Query: 7 YRGMVESLMHASTGTRPDVAYAVHQAARRMEDPCREDFSTCKRILRYLNTVRNLGITFDGKSNGHGLEGFVDADWAEHVQDRKFTTGYVFKLNSGARSWCSRKQQLVTWSGTEAEYVAAGEEGKETVYLRD*LGSIGFGCRGSTTLFEDNKSAIYLGKGSGAHCRIKHIEVRWHGIREWIREGVLAL 567 YR +V +LM+ +T TRPD+A AV + A+ E + + KRIL+YL T ++LG+ F+G + G L G+ DA WA + R+ TTGYVF LN A SW S++Q V S TEAEY+A +E V+LR L +G C +TT+F+DN+ I L K H R KHI++++H +RE + + V+ L Sbjct: 190 YRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGE-LIGYADASWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVAATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVL 375
BLAST of mRNA_H-paniculata_contig14881.2909.1 vs. uniprot
Match: A0A2P4XPH2_9STRA (RxLR effector candidate protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XPH2_9STRA) HSP 1 Score: 152 bits (383), Expect = 1.070e-42 Identity = 76/186 (40.86%), Postives = 116/186 (62.37%), Query Frame = 1 Query: 10 RGMVESLMHASTGTRPDVAYAVHQAARRMEDPCREDFSTCKRILRYLNTVRNLGITFDGKSNGHGLEGFVDADWAEHVQDRKFTTGYVFKLNSGARSWCSRKQQLVTWSGTEAEYVAAGEEGKETVYLRD*LGSIGFGCRGSTTLFEDNKSAIYLGKGSGAHCRIKHIEVRWHGIREWIREGVLAL 567 R +V +LM+ +T TRP++AYAV + A+ E + + KRIL+YL T +++G+ F+G G L G+ DA+WA + R+ TTGYVF LN A SW S++Q V S TEAEY+A +E V+LR L +G+ +G+TT+++DN+ I L K H R KHI++++H +RE + + L Sbjct: 23 RELVGALMYLATSTRPNIAYAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDVGLVFNGGIKGE-LVGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNAIQEAVWLRQLLKDLGYENKGATTIYQDNQGCIALAKNPAYHTRTKHIDIKFHFLREKVESKTVEL 207
BLAST of mRNA_H-paniculata_contig14881.2909.1 vs. uniprot
Match: A0A6S7HIQ4_PARCT (Uncharacterized protein n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HIQ4_PARCT) HSP 1 Score: 152 bits (384), Expect = 2.940e-42 Identity = 80/191 (41.88%), Postives = 113/191 (59.16%), Query Frame = 1 Query: 1 TEYRGMVESLMHA--STGTRPDVAYAVHQAARRMEDPCREDFSTCKRILRYLNTVRNLGITFDGKSNGHGLEGFVDADWAEHVQDRKFTTGYVFKLNSGARSWCSRKQQLVTWSGTEAEYVAAGEEGKETVYLRD*LGSIGFGCRGSTTLFEDNKSAIYLGKGSGAHCRIKHIEVRWHGIREWIREGVLAL 567 T+Y+ ++ S H+ + TRPD+AYAV ++ P + KR+LRYL NLG+ +DG S L + DADWA + DR T+G + SGA SW S+KQ V S EAEYVA +ET++LR LG IG +T ++EDN++AI + K +H R KHI+ R+H IRE ++ GV+AL Sbjct: 67 TQYQSIIGSCRHSPLAVATRPDIAYAVGVLSKFCAKPSEAHLTAAKRVLRYLKGTENLGLKYDG-STDESLTVYSDADWAGDLDDRHSTSGNALIMASGAVSWLSKKQPTVAMSTAEAEYVALSFATQETIWLRQLLGDIGQPLAEATVIYEDNQAAISIAKNPVSHARTKHIDTRYHFIREELQSGVIAL 256
BLAST of mRNA_H-paniculata_contig14881.2909.1 vs. uniprot
Match: R7QDG7_CHOCR (Uncharacterized protein n=3 Tax=Chondrus crispus TaxID=2769 RepID=R7QDG7_CHOCR) HSP 1 Score: 150 bits (379), Expect = 6.970e-42 Identity = 78/188 (41.49%), Postives = 109/188 (57.98%), Query Frame = 1 Query: 7 YRGMVESLMHASTGTRPDVAYAVHQAARRMEDPCREDFSTCKRILRYLNTVRNLGITFDGKSNGHGLEGFVDADWAEHVQDRKFTTGYVFKLNSGARSWCSRKQQLVTWSGTEAEYVAAGEEGKETVYLRD*LGSI-GFGCRGSTTLFEDNKSAIYLGKGSGAHCRIKHIEVRWHGIREWIREGVLAL 567 YR V SLM+ GTRPD+AYA+ + ++ +PC ++ KR++RY+ RNLGI FD KS L GF DADWA RK T+GYVFK GA SW SRKQ +V S EAEY+A E KE +LR + + G + + DN I + + R KH++V++H +R+ I+ V++L Sbjct: 31 YREAVGSLMYLMVGTRPDLAYAIGKLSQHSANPCESHWAGVKRVMRYVQGTRNLGIVFDNKSKSPELFGFSDADWAGCSDSRKSTSGYVFKFCGGAISWSSRKQTVVATSTCEAEYIALCEACKEATWLRQVVADVLGLDSDPTIVMGCDNAGTISYAQNESVNRRNKHVDVKYHYVRDAIKRNVISL 218
BLAST of mRNA_H-paniculata_contig14881.2909.1 vs. uniprot
Match: A0A090C2V0_HYAAE (RxLR effector candidate protein (Fragment) n=3 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=A0A090C2V0_HYAAE) HSP 1 Score: 149 bits (377), Expect = 2.960e-41 Identity = 77/188 (40.96%), Postives = 109/188 (57.98%), Query Frame = 1 Query: 7 YRGMVESLMHASTGTRPDVAYAVHQAARRMEDPCREDFSTCKRILRYLNTVRNLGITFDGKSNGHGLEGFVDADWAEHVQDRKFTTGYVFKLNSGARSWCSRKQQLVTWSGTEAEYVAAGEEGKETVYLRD*LGSIG-FGCRGSTTLFEDNKSAIYLGKGSGAHCRIKHIEVRWHGIREWIREGVLAL 567 YR V +M+ TRPD+A AV ++ DPC + KR+LRYL N G+ F + G + G+ DADWA ++ R+ T+GYVF +N G SW S+KQ+ V S TEAEY+A E KE V+L+ LG +G + +FEDN+ +I L K H R KHI++R+H +RE + G + L Sbjct: 37 YRSAVGGIMYLMVATRPDLAAAVGSLSQFSSDPCPTHWQALKRVLRYLQATPNHGLEFT-REEGSRICGYTDADWAGDIESRRSTSGYVFMMNGGCISWKSQKQRTVALSSTEAEYMALSEATKEAVWLKVFLGELGEMTSDEAIKMFEDNQGSIALAKNPEFHKRTKHIDIRYHFVREKVESGEVIL 223
BLAST of mRNA_H-paniculata_contig14881.2909.1 vs. uniprot
Match: A0A7D9D5L2_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D5L2_PARCT) HSP 1 Score: 150 bits (378), Expect = 3.530e-41 Identity = 77/179 (43.02%), Postives = 107/179 (59.78%), Query Frame = 1 Query: 4 EYRGMVESLMHASTGTRPDVAYAVHQAARRMEDPCREDFSTCKRILRYLNTVRNLGITFDGKSNGHGLEGFVDADWAEHVQDRKFTTGYVFKLNSGARSWCSRKQQLVTWSGTEAEYVAAGEEGKETVYLRD*LGSIGFGCRGSTTLFEDNKSAIYLGKGSGAHCRIKHIEVRWHGIRE 540 EY+ ++ L + +T TRPD+A AV ++ M P +E + KR+LRY+ N G+ F+GKS L G+ DADWA + R+ T+GYVF++N SWCS++Q VT S TEAEYVA +E V+LR L IG + + EDN+ AI L K H R KHI+V +H +RE Sbjct: 85 EYQKLIGCLTYVTTATRPDLASAVGILSKFMSKPSKEHWHGAKRVLRYIKDTVNYGLVFEGKSTKCSLIGYSDADWANDLDTRRSTSGYVFQINGSTVSWCSKRQPCVTRSTTEAEYVALSHATQEIVWLRRLLNDIGEKQDQPSIMNEDNQGAIELSKNPRFHNRTKHIDVAYHFVRE 263
BLAST of mRNA_H-paniculata_contig14881.2909.1 vs. uniprot
Match: A0A067QGW8_9AGAM (Uncharacterized protein n=1 Tax=Jaapia argillacea MUCL 33604 TaxID=933084 RepID=A0A067QGW8_9AGAM) HSP 1 Score: 147 bits (371), Expect = 7.800e-41 Identity = 74/182 (40.66%), Postives = 109/182 (59.89%), Query Frame = 1 Query: 4 EYRGMVESLMHASTGTRPDVAYAVHQAARRMEDPCREDFSTCKRILRYLNTVRNLGITFDGKSNGHGLEGFVDADWAEHVQDRKFTTGYVFKLNSGARSWCSRKQQLVTWSGTEAEYVAAGEEGKETVYLRD*LGSIGFGCRGSTT-LFEDNKSAIYLGKGSGAHCRIKHIEVRWHGIREWI 546 +Y+ ++ SL++A GTRPD++YA+ + +R +P + K ILRYL ++ + FDG S G GL G+ DADWAE+ DR TTGY F + GA SW +R+Q V S TEAEY+A + ++T + R L +GF T L DN+ AI++ R KH+++R+H IRE+I Sbjct: 31 KYQSLIGSLLYAMLGTRPDISYAITRLSRFNSNPSVSHWKAAKYILRYLKATKDFRLRFDG-STGSGLIGYSDADWAENKDDRHSTTGYCFLMAGGAVSWVTRRQPTVALSSTEAEYMALSDTSRQTAWFRTLLSELGFDLTSQPTPLCADNQGAIFMSVNPVHDRRTKHVDIRYHFIREFI 211
BLAST of mRNA_H-paniculata_contig14881.2909.1 vs. uniprot
Match: A0A4S4K468_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4K468_9APHY) HSP 1 Score: 152 bits (385), Expect = 8.000e-41 Identity = 83/187 (44.39%), Postives = 115/187 (61.50%), Query Frame = 1 Query: 7 YRGMVESLMHASTGTRPDVAYAVHQAARRMEDPCREDFSTCKRILRYLNTVRNLGITFDGKSNGHGLEGFVDADWAEHVQDRKFTTGYVFKLNSGARSWCSRKQQLVTWSGTEAEYVAAGEEGKETVYLRD*LGSIGFGCRGSTTLFEDNKSAIYLGKGSGAHCRIKHIEVRWHGIREWIREGVLAL 567 YR + SLM+A+ GTRPD+++A+ A+ ++P + KR+ RYL +NL + + G G LEG+VDAD A + R TGYVF ++ GA SW S+KQ+LVT S TEAEYVAA KE +++R LG + G TTL+ D++SAI L K H R KHI++R+H IR + G L L Sbjct: 247 YREAIGSLMYAAVGTRPDISFAISTLAQFSQNPGWTHWEAVKRVFRYLLGTKNLVLQYGGVQRG--LEGYVDADGASQ-EHRHAITGYVFLVDGGAVSWSSKKQELVTLSTTEAEYVAATHAAKEAMWIRRLLGEVFRPLDGPTTLYSDSQSAIALTKDGQYHARTKHIDIRYHFIRYVVEAGTLRL 430 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14881.2909.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14881.2909.1 >prot_H-paniculata_contig14881.2909.1 ID=prot_H-paniculata_contig14881.2909.1|Name=mRNA_H-paniculata_contig14881.2909.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=129bp MVESLMHASTGTRPDVAYAVHQAARRMEDPCREDFSTCKRILRYLNTVRNback to top mRNA from alignment at H-paniculata_contig14881:5034..5600- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14881.2909.1 ID=mRNA_H-paniculata_contig14881.2909.1|Name=mRNA_H-paniculata_contig14881.2909.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=567bp|location=Sequence derived from alignment at H-paniculata_contig14881:5034..5600- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14881:5034..5600- >mRNA_H-paniculata_contig14881.2909.1 ID=mRNA_H-paniculata_contig14881.2909.1|Name=mRNA_H-paniculata_contig14881.2909.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=774bp|location=Sequence derived from alignment at H-paniculata_contig14881:5034..5600- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |