prot_H-paniculata_contig14881.2909.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14881.2909.1
Unique Nameprot_H-paniculata_contig14881.2909.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length129
Homology
BLAST of mRNA_H-paniculata_contig14881.2909.1 vs. uniprot
Match: R7QDG7_CHOCR (Uncharacterized protein n=3 Tax=Chondrus crispus TaxID=2769 RepID=R7QDG7_CHOCR)

HSP 1 Score: 125 bits (315), Expect = 3.140e-33
Identity = 63/126 (50.00%), Postives = 79/126 (62.70%), Query Frame = 0
Query:    2 VESLMHASTGTRPDVAYAVHQAARRMEDPCREDFSTCKRILRYLNTVRNLGITFDGKSNGHGLEGFVDADWAEHVQDRKFTTGYVFKLNSGARSWCSRKQQLVTWSGTEAEYVAAGEEGKETVYLR 127
            V SLM+   GTRPD+AYA+ + ++   +PC   ++  KR++RY+   RNLGI FD KS    L GF DADWA     RK T+GYVFK   GA SW SRKQ +V  S  EAEY+A  E  KE  +LR
Sbjct:   35 VGSLMYLMVGTRPDLAYAIGKLSQHSANPCESHWAGVKRVMRYVQGTRNLGIVFDNKSKSPELFGFSDADWAGCSDSRKSTSGYVFKFCGGAISWSSRKQTVVATSTCEAEYIALCEACKEATWLR 160          
BLAST of mRNA_H-paniculata_contig14881.2909.1 vs. uniprot
Match: A0A7D9D5L2_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D5L2_PARCT)

HSP 1 Score: 117 bits (292), Expect = 2.470e-29
Identity = 56/127 (44.09%), Postives = 79/127 (62.20%), Query Frame = 0
Query:    1 MVESLMHASTGTRPDVAYAVHQAARRMEDPCREDFSTCKRILRYLNTVRNLGITFDGKSNGHGLEGFVDADWAEHVQDRKFTTGYVFKLNSGARSWCSRKQQLVTWSGTEAEYVAAGEEGKETVYLR 127
            ++  L + +T TRPD+A AV   ++ M  P +E +   KR+LRY+    N G+ F+GKS    L G+ DADWA  +  R+ T+GYVF++N    SWCS++Q  VT S TEAEYVA     +E V+LR
Sbjct:   89 LIGCLTYVTTATRPDLASAVGILSKFMSKPSKEHWHGAKRVLRYIKDTVNYGLVFEGKSTKCSLIGYSDADWANDLDTRRSTSGYVFQINGSTVSWCSKRQPCVTRSTTEAEYVALSHATQEIVWLR 215          
BLAST of mRNA_H-paniculata_contig14881.2909.1 vs. uniprot
Match: C0SQ79_NEOYE (Polyprotein n=2 Tax=Neopyropia yezoensis TaxID=2788 RepID=C0SQ79_NEOYE)

HSP 1 Score: 120 bits (302), Expect = 3.230e-29
Identity = 65/127 (51.18%), Postives = 85/127 (66.93%), Query Frame = 0
Query:    1 MVESLMHASTGTRPDVAYAVHQAARRMEDPCREDFSTCKRILRYLNTVRNLGITFDGKSNGHGLEGFVDADWAEHVQDRKFTTGYVFKLNSGARSWCSRKQQLVTWSGTEAEYVAAGEEGKETVYLR 127
            +V SLM+ S  TRPD+AYAV + ARRM  P   D+   K +LRYL   RN+GIT+  ++N   LEG+VD+D+A   Q RK TTG+V  L+ GA SW SR Q+LV  S   AEYVAA E  K++++LR
Sbjct: 1183 LVGSLMYLSNQTRPDLAYAVGKLARRMSAPTEGDWRLAKGVLRYLQGTRNMGITYGKEAN---LEGWVDSDFAGDTQSRKSTTGFVVTLHGGAISWRSRMQRLVATSTAIAEYVAAAEAVKDSLWLR 1306          
BLAST of mRNA_H-paniculata_contig14881.2909.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT)

HSP 1 Score: 119 bits (299), Expect = 7.360e-29
Identity = 58/126 (46.03%), Postives = 79/126 (62.70%), Query Frame = 0
Query:    2 VESLMHASTGTRPDVAYAVHQAARRMEDPCREDFSTCKRILRYLNTVRNLGITFDGKSNGHGLEGFVDADWAEHVQDRKFTTGYVFKLNSGARSWCSRKQQLVTWSGTEAEYVAAGEEGKETVYLR 127
            V  L++ ST TRPD+AYAV   AR   DP  E +   KRI+RYLN  R++G+ +DG        G+ DADWA  + DRK T+GYVF++++ A SW S+KQ  V  S  EAEY+A     +E V+L+
Sbjct:  280 VGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMALASATQEAVWLQ 405          
BLAST of mRNA_H-paniculata_contig14881.2909.1 vs. uniprot
Match: UPI001E2788DD (secreted RxLR effector protein 161-like n=1 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E2788DD)

HSP 1 Score: 111 bits (278), Expect = 8.170e-29
Identity = 57/126 (45.24%), Postives = 83/126 (65.87%), Query Frame = 0
Query:    2 VESLMHASTGTRPDVAYAVHQAARRMEDPCREDFSTCKRILRYLNTVRNLGITFDGKSNGHGLEGFVDADWAEHVQDRKFTTGYVFKLNSGARSWCSRKQQLVTWSGTEAEYVAAGEEGKETVYLR 127
            V SLM A+  +RPD+AY+V  A+R +  P +  ++  KRI+RYL +   LGI +  + +   L GF D+D+A     RK TTGY+FKL++G  +W S++QQ VT S TEAEYVAA +  KE +++R
Sbjct:   31 VGSLMFAAVVSRPDIAYSVGVASRYLNAPSKTHWNAVKRIIRYLKSTSELGIYYS-REDKLQLSGFSDSDYASDEDTRKSTTGYIFKLSNGDVTWSSKRQQAVTLSTTEAEYVAACQATKEAIWIR 155          
BLAST of mRNA_H-paniculata_contig14881.2909.1 vs. uniprot
Match: A0A2G8RWL4_9APHY (Uncharacterized protein n=2 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWL4_9APHY)

HSP 1 Score: 113 bits (283), Expect = 1.310e-28
Identity = 57/126 (45.24%), Postives = 82/126 (65.08%), Query Frame = 0
Query:    2 VESLMHASTGTRPDVAYAVHQAARRMEDPCREDFSTCKRILRYLNTVRNLGITFDGKSNGHGLEGFVDADWAEHVQDRKFTTGYVFKLNSGARSWCSRKQQLVTWSGTEAEYVAAGEEGKETVYLR 127
            V SL +AS GTRPD+ YAV   +R +E+P R  +  CKR+ RYL   ++L +T+ G+     L GF DAD + H +DRK  +GY F ++ GA SW S+KQ++++ S TE+EYVA     KE ++LR
Sbjct:   31 VGSLQYASLGTRPDITYAVSVLSRFLENPGRAHWEACKRVFRYLAGTKSLRLTYGGEQRD--LVGFTDADGSMH-EDRKAISGYAFLIDGGAVSWASKKQEIISLSTTESEYVAITHASKEALWLR 153          
BLAST of mRNA_H-paniculata_contig14881.2909.1 vs. uniprot
Match: UPI0009AB427F (uncharacterized protein LOC109950541 n=1 Tax=Prunus persica TaxID=3760 RepID=UPI0009AB427F)

HSP 1 Score: 114 bits (284), Expect = 5.590e-28
Identity = 59/127 (46.46%), Postives = 82/127 (64.57%), Query Frame = 0
Query:    1 MVESLMHASTGTRPDVAYAVHQAARRMEDPCREDFSTCKRILRYLNTVRNLGITFDGKSNGHGLEGFVDADWAEHVQDRKFTTGYVFKLNSGARSWCSRKQQLVTWSGTEAEYVAAGEEGKETVYLR 127
            ++ SLM+  T TRPD+ YAV   +R ME P     +  KRILRY+    + G+ F  + +G G  G+ D+D+A  + DRK T+G++F LNSGA SW S+KQQ+VT S TEAEYVAA     + ++LR
Sbjct:  103 IIGSLMYL-TYTRPDIMYAVSLVSRYMEKPTEMHLNAAKRILRYVKGTIDYGV-FYKREDGSGFVGYTDSDYAGDIDDRKSTSGHIFLLNSGAISWSSKKQQIVTLSSTEAEYVAAAASSCQAMWLR 227          
BLAST of mRNA_H-paniculata_contig14881.2909.1 vs. uniprot
Match: A0A224X581_9HEMI (Putative polyprotein (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224X581_9HEMI)

HSP 1 Score: 116 bits (290), Expect = 1.330e-27
Identity = 59/127 (46.46%), Postives = 80/127 (62.99%), Query Frame = 0
Query:    1 MVESLMHASTGTRPDVAYAVHQAARRMEDPCREDFSTCKRILRYLNTVRNLGITFDGKSNGHGLEGFVDADWAEHVQDRKFTTGYVFKLNSGARSWCSRKQQLVTWSGTEAEYVAAGEEGKETVYLR 127
            +V +L + +  TRPD+AYAV    +   D  R  +   KR+LRYL    NLGIT++ ++    + G+VDADWA  +QDR+  TGY F L+ G  SW SRKQ+ V  S TEAEY+A GE  KE +YL+
Sbjct: 1113 LVGALTYLAVTTRPDIAYAVSCLGQFNNDYDRTHWIAAKRVLRYLKGTMNLGITYEREAKP--IRGYVDADWANCIQDRRSYTGYTFILSGGPISWDSRKQRTVALSSTEAEYMALGEAAKEAIYLK 1237          
BLAST of mRNA_H-paniculata_contig14881.2909.1 vs. uniprot
Match: A0A0J7KC73_LASNI (Integrase core domain protein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KC73_LASNI)

HSP 1 Score: 115 bits (289), Expect = 1.680e-27
Identity = 55/124 (44.35%), Postives = 80/124 (64.52%), Query Frame = 0
Query:    4 SLMHASTGTRPDVAYAVHQAARRMEDPCREDFSTCKRILRYLNTVRNLGITFDGKSNGHGLEGFVDADWAEHVQDRKFTTGYVFKLNSGARSWCSRKQQLVTWSGTEAEYVAAGEEGKETVYLR 127
            SL++ +T TRPD++YAV+  +R ++ P  +DF   KRI RYL   + LG+ + G+ +   L  + D+D+A   + RK TTGYV K   G  SWCSRKQ +V  S TEAE+++A E  KE +YL+
Sbjct:  492 SLLYLTTKTRPDLSYAVNYYSRYIQSPESKDFLNVKRIFRYLQNTKELGLVYGGEKDTEKLTAYCDSDYAGDPETRKSTTGYVIKYCGGPVSWCSRKQPIVALSSTEAEFISAAECCKELLYLK 615          
BLAST of mRNA_H-paniculata_contig14881.2909.1 vs. uniprot
Match: A0A6S7JEY7_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JEY7_PARCT)

HSP 1 Score: 115 bits (288), Expect = 2.130e-27
Identity = 56/126 (44.44%), Postives = 77/126 (61.11%), Query Frame = 0
Query:    2 VESLMHASTGTRPDVAYAVHQAARRMEDPCREDFSTCKRILRYLNTVRNLGITFDGKSNGHGLEGFVDADWAEHVQDRKFTTGYVFKLNSGARSWCSRKQQLVTWSGTEAEYVAAGEEGKETVYLR 127
            V  L++ ST TRPD+AYAV   AR    P  E +   KRI+RYLN  R++G+ +DG        G+ DADWA  + DRK T+GYVF++++ A SW S+KQ  V  S  EAEY+      +E V+L+
Sbjct:  428 VGHLLYLSTKTRPDIAYAVSDVARFSAHPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMTLASATQEAVWLQ 553          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14881.2909.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QDG7_CHOCR3.140e-3350.00Uncharacterized protein n=3 Tax=Chondrus crispus T... [more]
A0A7D9D5L2_PARCT2.470e-2944.09Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
C0SQ79_NEOYE3.230e-2951.18Polyprotein n=2 Tax=Neopyropia yezoensis TaxID=278... [more]
A0A7D9KES8_PARCT7.360e-2946.03Retrovirus-related Pol poly from transposon TNT 1-... [more]
UPI001E2788DD8.170e-2945.24secreted RxLR effector protein 161-like n=1 Tax=Ha... [more]
A0A2G8RWL4_9APHY1.310e-2845.24Uncharacterized protein n=2 Tax=Ganoderma sinense ... [more]
UPI0009AB427F5.590e-2846.46uncharacterized protein LOC109950541 n=1 Tax=Prunu... [more]
A0A224X581_9HEMI1.330e-2746.46Putative polyprotein (Fragment) n=1 Tax=Panstrongy... [more]
A0A0J7KC73_LASNI1.680e-2744.35Integrase core domain protein n=1 Tax=Lasius niger... [more]
A0A6S7JEY7_PARCT2.130e-2744.44Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 10..127
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 10..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14881contigH-paniculata_contig14881:5199..5585 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14881.2909.1mRNA_H-paniculata_contig14881.2909.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14881 5034..5600 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14881.2909.1 ID=prot_H-paniculata_contig14881.2909.1|Name=mRNA_H-paniculata_contig14881.2909.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=129bp
MVESLMHASTGTRPDVAYAVHQAARRMEDPCREDFSTCKRILRYLNTVRN
LGITFDGKSNGHGLEGFVDADWAEHVQDRKFTTGYVFKLNSGARSWCSRK
QQLVTWSGTEAEYVAAGEEGKETVYLRD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like