mRNA_H-paniculata_contig14815.2867.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14815.2867.1 vs. uniprot
Match: A0A6H5L4Y4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y4_9PHAE) HSP 1 Score: 176 bits (445), Expect = 1.060e-51 Identity = 85/201 (42.29%), Postives = 124/201 (61.69%), Query Frame = 1 Query: 1 MEQPDAVPPEFWELFFQSNLTALGEKYRPICVGSTMRRTLAAGVA-----KLEEVSLSERQYGVGVSGGAELMGLRTKAYCQLRHWLIALDYTNVFNSVKGAAVLKEVAICTPGLTPFVAKCYGEKPADIIFQMDTDERRRISSNTGIHQGDGLGPALFCMPVGTILRKCRQQFETLGVELLTYLDDLVLAMGELTEKNLQ 588 + P+A PPEFW L+ +S+L ALGEK RP+C+G T RR +AAG KLEE+ Q+GV V+GG E + + + Q HW++ D +N FN+ K A++ + A P L ++A+CY E PA I+ MD+ ERR I +G+ QGDG+GP LFC + I+ K R +++ LGV L Y+DD+ L +T +N+Q Sbjct: 53 INDPNAFPPEFWTLWKRSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAENIQ 253
BLAST of mRNA_H-paniculata_contig14815.2867.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE) HSP 1 Score: 174 bits (441), Expect = 3.700e-49 Identity = 86/203 (42.36%), Postives = 123/203 (60.59%), Query Frame = 1 Query: 1 MEQPDAVPPEFWELFFQSNLTALGEKYRPICVGSTMRRTLAAGVA-----KLEEVSLSERQYGVGVSGGAELMGLRTKAYCQLRHWLIALDYTNVFNSVKGAAVLKEVAICTPGLTPFVAKCYGEKPADIIFQMDTDERRRISSNTGIHQGDGLGPALFCMPVGTILRKCRQQFETLGVELLTYLDDLVLAMGELTEKNLQAI 594 + P+A PPEFW L+ QS+L ALGEK RP+C+G T RR +AAG KLEE+ Q+GV V+GG E + + + Q HW++ D +N FN+ K A++ + A P L ++A+CY E PA I+ MD+ RR I G+ QGDG+GP LFC + I+ K R +++ LGV L Y+DD+ L +T +N+Q I Sbjct: 143 INDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVI 345
BLAST of mRNA_H-paniculata_contig14815.2867.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE) HSP 1 Score: 177 bits (450), Expect = 7.760e-49 Identity = 87/204 (42.65%), Postives = 126/204 (61.76%), Query Frame = 1 Query: 1 MEQPDAVPPEFWELFFQSNLTALGEKYRPICVGSTMRRTLAAGVA-----KLEEVSLSERQYGVGVSGGAELMGLRTKAYCQLRHWLIALDYTNVFNSVKGAAVLKEVAICTPGLTPFVAKCYGEKPADIIFQMDTDERRRISSNTGIHQGDGLGPALFCMPVGTILRKCRQQFETLGVELLTYLDDLV-LAMGELTEKNLQAI 594 + P+A PPEFW L+ QS+L ALGEK RP+C+G T RR +AAG KLEE+ Q+GV V+GG E + + + Q HW++ D +N FN+ K A++ + A P L ++A+CY E PA I+ MD+ ERR I +G+ QGDG+GP LFC + I+ K R +++ LGV L Y+DD++ L +T +N+Q I Sbjct: 52 INDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVI 255
BLAST of mRNA_H-paniculata_contig14815.2867.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE) HSP 1 Score: 177 bits (449), Expect = 4.890e-48 Identity = 87/203 (42.86%), Postives = 125/203 (61.58%), Query Frame = 1 Query: 1 MEQPDAVPPEFWELFFQSNLTALGEKYRPICVGSTMRRTLAAGVA-----KLEEVSLSERQYGVGVSGGAELMGLRTKAYCQLRHWLIALDYTNVFNSVKGAAVLKEVAICTPGLTPFVAKCYGEKPADIIFQMDTDERRRISSNTGIHQGDGLGPALFCMPVGTILRKCRQQFETLGVELLTYLDDLVLAMGELTEKNLQAI 594 + P+A PPEFW L+ QS+L ALGEK RP+C+G T RR +AAG KLEE+ Q+GV V+GG E + + + Q HW++ D +N FN+ K A++ + A P L ++A+CY E PA I+ MD+ ERR I +G+ QGDG+GP LFC + I+ K R +++ LGV L Y+DD+ L +T +N+Q I Sbjct: 442 INDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVI 644
BLAST of mRNA_H-paniculata_contig14815.2867.1 vs. uniprot
Match: A0A6H5K0V7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0V7_9PHAE) HSP 1 Score: 172 bits (437), Expect = 5.110e-48 Identity = 84/203 (41.38%), Postives = 123/203 (60.59%), Query Frame = 1 Query: 1 MEQPDAVPPEFWELFFQSNLTALGEKYRPICVGSTMRRTLAAGVA-----KLEEVSLSERQYGVGVSGGAELMGLRTKAYCQLRHWLIALDYTNVFNSVKGAAVLKEVAICTPGLTPFVAKCYGEKPADIIFQMDTDERRRISSNTGIHQGDGLGPALFCMPVGTILRKCRQQFETLGVELLTYLDDLVLAMGELTEKNLQAI 594 + P+ VPPEFW L+ QS+L ALGEK RP+C+G T RR +AAG KLEE+ Q+GV V+GG E + + + Q HW++ D ++ FN+ K ++ + A P + ++A+CY E PA I+ MD+ ERR I +G+ QGDG+GP LFC + I+ K R ++ LGV L Y+DD+ L +T +N+Q I Sbjct: 45 INDPNTVPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSDAFNTGKRTVIMAQAAKSVPDVLGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAMYDHLGVCLKAYMDDISLHFNNITAENIQLI 247
BLAST of mRNA_H-paniculata_contig14815.2867.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE) HSP 1 Score: 177 bits (449), Expect = 7.020e-48 Identity = 87/203 (42.86%), Postives = 125/203 (61.58%), Query Frame = 1 Query: 1 MEQPDAVPPEFWELFFQSNLTALGEKYRPICVGSTMRRTLAAGVA-----KLEEVSLSERQYGVGVSGGAELMGLRTKAYCQLRHWLIALDYTNVFNSVKGAAVLKEVAICTPGLTPFVAKCYGEKPADIIFQMDTDERRRISSNTGIHQGDGLGPALFCMPVGTILRKCRQQFETLGVELLTYLDDLVLAMGELTEKNLQAI 594 + P+A PPEFW L+ QS+L ALGEK RP+C+G T RR +AAG KLEE+ Q+GV V+GG E + + + Q HW++ D +N FN+ K A++ + A P L ++A+CY E PA I+ MD+ ERR I +G+ QGDG+GP LFC + I+ K R +++ LGV L Y+DD+ L +T +N+Q I Sbjct: 421 INDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVI 623
BLAST of mRNA_H-paniculata_contig14815.2867.1 vs. uniprot
Match: A0A6H5KDD0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD0_9PHAE) HSP 1 Score: 171 bits (433), Expect = 9.890e-48 Identity = 85/203 (41.87%), Postives = 123/203 (60.59%), Query Frame = 1 Query: 1 MEQPDAVPPEFWELFFQSNLTALGEKYRPICVGSTMRRTLAAGVA-----KLEEVSLSERQYGVGVSGGAELMGLRTKAYCQLRHWLIALDYTNVFNSVKGAAVLKEVAICTPGLTPFVAKCYGEKPADIIFQMDTDERRRISSNTGIHQGDGLGPALFCMPVGTILRKCRQQFETLGVELLTYLDDLVLAMGELTEKNLQAI 594 + P+A PPEFW L+ QS+L ALGEK RP+C+G T RR +AAG KLEE+ Q+GV V+GG E + + + Q HW++ D +N FN+ K A++ + A P L ++A+CY E A I+ MD+ ERR I +G+ QGDG+GP LF + I+ K R +++ LGV L Y+DD+ L +T +N+Q I Sbjct: 9 INDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAKAAKSVPNLVGYIARCYDEISAKSIYAMDSGERRTIECKSGVQQGDGMGPPLFFFILFPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAENIQVI 211
BLAST of mRNA_H-paniculata_contig14815.2867.1 vs. uniprot
Match: A0A6H5KT19_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT19_9PHAE) HSP 1 Score: 167 bits (424), Expect = 1.160e-47 Identity = 85/203 (41.87%), Postives = 123/203 (60.59%), Query Frame = 1 Query: 1 MEQPDAVPPEFWELFFQSNLTALGEKYRPICVGSTMRRTLAAGVA-----KLEEVSLSERQYGVGVSGGAELMGLRTKAYCQLRHWLIALDYTNVFNSVKGAAVLKEVAICTPGLTPFVAKCYGEKPADIIFQMDTDERRRISSNTGIHQGDGLGPALFCMPVGTILRKCRQQFETLGVELLTYLDDLVLAMGELTEKNLQAI 594 + P+A PPEFW L+ QS+L ALGEK RP+C+G T RR +AAG KLEE+ Q+GV V+GG E + + + Q HW++ D +N N+ K A++ + A P L +A+CY E PA I+ MD+ ERR I +G+ QGDG+GP LFC + I+ K R +++ LGV L Y+DD+ L +T +++Q I Sbjct: 98 INDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVTGGVEQVAMDAQLVDQTGHWVVQTDCSNGLNTGKRTAIMAQAAKSVPDLVGCIARCY-ELPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAESIQVI 299
BLAST of mRNA_H-paniculata_contig14815.2867.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE) HSP 1 Score: 174 bits (442), Expect = 2.710e-47 Identity = 85/201 (42.29%), Postives = 124/201 (61.69%), Query Frame = 1 Query: 1 MEQPDAVPPEFWELFFQSNLTALGEKYRPICVGSTMRRTLAAGVA-----KLEEVSLSERQYGVGVSGGAELMGLRTKAYCQLRHWLIALDYTNVFNSVKGAAVLKEVAICTPGLTPFVAKCYGEKPADIIFQMDTDERRRISSNTGIHQGDGLGPALFCMPVGTILRKCRQQFETLGVELLTYLDDLVLAMGELTEKNLQ 588 ++ P A PPEFW L QS+L ALGEK RP+C+G T RR +AAG KLEE+ Q+GV V+GG E + + + Q HW++ D +N FN+ K A++ + + P L ++A+CY E PA I+ MD+ ERR I +G+ QGDG+GP LFC + I+ K R +++ LGV L Y+DD+ L ++T +N+Q Sbjct: 420 IKDPHAFPPEFWTLLKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAIDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQ 620
BLAST of mRNA_H-paniculata_contig14815.2867.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE) HSP 1 Score: 173 bits (438), Expect = 2.230e-46 Identity = 82/203 (40.39%), Postives = 128/203 (63.05%), Query Frame = 1 Query: 1 MEQPDAVPPEFWELFFQSNLTALGEKYRPICVGSTMRRTLAAGVA-----KLEEVSLSERQYGVGVSGGAELMGLRTKAYCQLRHWLIALDYTNVFNSVKGAAVLKEVAICTPGLTPFVAKCYGEKPADIIFQMDTDERRRISSNTGIHQGDGLGPALFCMPVGTILRKCRQQFETLGVELLTYLDDLVLAMGELTEKNLQAI 594 + P+ PPEFW L+ QS+L ALGEK RP+C+G T RR +AAG KLEE+ Q+GV V+GG E + + + Q +W+I D +N FN+ K A++ + A P L ++A+CY E PA +++MD+ ERR + +G+ QGDG+GP LF + + I+ K + +++ LGV Y+DD+ L + +LTE+++QA+ Sbjct: 591 VNDPNTFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVRQWKPKLEEMFREANQFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHLKDLTEESVQAM 793 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14815.2867.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14815.2867.1 >prot_H-paniculata_contig14815.2867.1 ID=prot_H-paniculata_contig14815.2867.1|Name=mRNA_H-paniculata_contig14815.2867.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=198bp MEQPDAVPPEFWELFFQSNLTALGEKYRPICVGSTMRRTLAAGVAKLEEVback to top mRNA from alignment at H-paniculata_contig14815:4792..5385+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14815.2867.1 ID=mRNA_H-paniculata_contig14815.2867.1|Name=mRNA_H-paniculata_contig14815.2867.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=594bp|location=Sequence derived from alignment at H-paniculata_contig14815:4792..5385+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14815:4792..5385+ >mRNA_H-paniculata_contig14815.2867.1 ID=mRNA_H-paniculata_contig14815.2867.1|Name=mRNA_H-paniculata_contig14815.2867.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1188bp|location=Sequence derived from alignment at H-paniculata_contig14815:4792..5385+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |