prot_H-paniculata_contig14815.2867.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14815.2867.1
Unique Nameprot_H-paniculata_contig14815.2867.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length198
Homology
BLAST of mRNA_H-paniculata_contig14815.2867.1 vs. uniprot
Match: A0A6H5L4Y4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y4_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 1.060e-51
Identity = 85/201 (42.29%), Postives = 124/201 (61.69%), Query Frame = 0
Query:    1 MEQPDAVPPEFWELFFQSNLTALGEKYRPICVGSTMRRTLAAGVA-----KLEEVSLSERQYGVGVSGGAELMGLRTKAYCQLRHWLIALDYTNVFNSVKGAAVLKEVAICTPGLTPFVAKCYGEKPADIIFQMDTDERRRISSNTGIHQGDGLGPALFCMPVGTILRKCRQQFETLGVELLTYLDDLVLAMGELTEKNLQ 196
            +  P+A PPEFW L+ +S+L ALGEK RP+C+G T RR +AAG       KLEE+     Q+GV V+GG E + +  +   Q  HW++  D +N FN+ K  A++ + A   P L  ++A+CY E PA  I+ MD+ ERR I   +G+ QGDG+GP LFC  +  I+ K R +++ LGV L  Y+DD+ L    +T +N+Q
Sbjct:   53 INDPNAFPPEFWTLWKRSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAENIQ 253          
BLAST of mRNA_H-paniculata_contig14815.2867.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 3.700e-49
Identity = 86/203 (42.36%), Postives = 123/203 (60.59%), Query Frame = 0
Query:    1 MEQPDAVPPEFWELFFQSNLTALGEKYRPICVGSTMRRTLAAGVA-----KLEEVSLSERQYGVGVSGGAELMGLRTKAYCQLRHWLIALDYTNVFNSVKGAAVLKEVAICTPGLTPFVAKCYGEKPADIIFQMDTDERRRISSNTGIHQGDGLGPALFCMPVGTILRKCRQQFETLGVELLTYLDDLVLAMGELTEKNLQAI 198
            +  P+A PPEFW L+ QS+L ALGEK RP+C+G T RR +AAG       KLEE+     Q+GV V+GG E + +  +   Q  HW++  D +N FN+ K  A++ + A   P L  ++A+CY E PA  I+ MD+  RR I    G+ QGDG+GP LFC  +  I+ K R +++ LGV L  Y+DD+ L    +T +N+Q I
Sbjct:  143 INDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVI 345          
BLAST of mRNA_H-paniculata_contig14815.2867.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 7.760e-49
Identity = 87/204 (42.65%), Postives = 126/204 (61.76%), Query Frame = 0
Query:    1 MEQPDAVPPEFWELFFQSNLTALGEKYRPICVGSTMRRTLAAGVA-----KLEEVSLSERQYGVGVSGGAELMGLRTKAYCQLRHWLIALDYTNVFNSVKGAAVLKEVAICTPGLTPFVAKCYGEKPADIIFQMDTDERRRISSNTGIHQGDGLGPALFCMPVGTILRKCRQQFETLGVELLTYLDDLV-LAMGELTEKNLQAI 198
            +  P+A PPEFW L+ QS+L ALGEK RP+C+G T RR +AAG       KLEE+     Q+GV V+GG E + +  +   Q  HW++  D +N FN+ K  A++ + A   P L  ++A+CY E PA  I+ MD+ ERR I   +G+ QGDG+GP LFC  +  I+ K R +++ LGV L  Y+DD++ L    +T +N+Q I
Sbjct:   52 INDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVI 255          
BLAST of mRNA_H-paniculata_contig14815.2867.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 4.890e-48
Identity = 87/203 (42.86%), Postives = 125/203 (61.58%), Query Frame = 0
Query:    1 MEQPDAVPPEFWELFFQSNLTALGEKYRPICVGSTMRRTLAAGVA-----KLEEVSLSERQYGVGVSGGAELMGLRTKAYCQLRHWLIALDYTNVFNSVKGAAVLKEVAICTPGLTPFVAKCYGEKPADIIFQMDTDERRRISSNTGIHQGDGLGPALFCMPVGTILRKCRQQFETLGVELLTYLDDLVLAMGELTEKNLQAI 198
            +  P+A PPEFW L+ QS+L ALGEK RP+C+G T RR +AAG       KLEE+     Q+GV V+GG E + +  +   Q  HW++  D +N FN+ K  A++ + A   P L  ++A+CY E PA  I+ MD+ ERR I   +G+ QGDG+GP LFC  +  I+ K R +++ LGV L  Y+DD+ L    +T +N+Q I
Sbjct:  442 INDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVI 644          
BLAST of mRNA_H-paniculata_contig14815.2867.1 vs. uniprot
Match: A0A6H5K0V7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0V7_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 5.110e-48
Identity = 84/203 (41.38%), Postives = 123/203 (60.59%), Query Frame = 0
Query:    1 MEQPDAVPPEFWELFFQSNLTALGEKYRPICVGSTMRRTLAAGVA-----KLEEVSLSERQYGVGVSGGAELMGLRTKAYCQLRHWLIALDYTNVFNSVKGAAVLKEVAICTPGLTPFVAKCYGEKPADIIFQMDTDERRRISSNTGIHQGDGLGPALFCMPVGTILRKCRQQFETLGVELLTYLDDLVLAMGELTEKNLQAI 198
            +  P+ VPPEFW L+ QS+L ALGEK RP+C+G T RR +AAG       KLEE+     Q+GV V+GG E + +  +   Q  HW++  D ++ FN+ K   ++ + A   P +  ++A+CY E PA  I+ MD+ ERR I   +G+ QGDG+GP LFC  +  I+ K R  ++ LGV L  Y+DD+ L    +T +N+Q I
Sbjct:   45 INDPNTVPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSDAFNTGKRTVIMAQAAKSVPDVLGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAMYDHLGVCLKAYMDDISLHFNNITAENIQLI 247          
BLAST of mRNA_H-paniculata_contig14815.2867.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 7.020e-48
Identity = 87/203 (42.86%), Postives = 125/203 (61.58%), Query Frame = 0
Query:    1 MEQPDAVPPEFWELFFQSNLTALGEKYRPICVGSTMRRTLAAGVA-----KLEEVSLSERQYGVGVSGGAELMGLRTKAYCQLRHWLIALDYTNVFNSVKGAAVLKEVAICTPGLTPFVAKCYGEKPADIIFQMDTDERRRISSNTGIHQGDGLGPALFCMPVGTILRKCRQQFETLGVELLTYLDDLVLAMGELTEKNLQAI 198
            +  P+A PPEFW L+ QS+L ALGEK RP+C+G T RR +AAG       KLEE+     Q+GV V+GG E + +  +   Q  HW++  D +N FN+ K  A++ + A   P L  ++A+CY E PA  I+ MD+ ERR I   +G+ QGDG+GP LFC  +  I+ K R +++ LGV L  Y+DD+ L    +T +N+Q I
Sbjct:  421 INDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVI 623          
BLAST of mRNA_H-paniculata_contig14815.2867.1 vs. uniprot
Match: A0A6H5KDD0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD0_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 9.890e-48
Identity = 85/203 (41.87%), Postives = 123/203 (60.59%), Query Frame = 0
Query:    1 MEQPDAVPPEFWELFFQSNLTALGEKYRPICVGSTMRRTLAAGVA-----KLEEVSLSERQYGVGVSGGAELMGLRTKAYCQLRHWLIALDYTNVFNSVKGAAVLKEVAICTPGLTPFVAKCYGEKPADIIFQMDTDERRRISSNTGIHQGDGLGPALFCMPVGTILRKCRQQFETLGVELLTYLDDLVLAMGELTEKNLQAI 198
            +  P+A PPEFW L+ QS+L ALGEK RP+C+G T RR +AAG       KLEE+     Q+GV V+GG E + +  +   Q  HW++  D +N FN+ K  A++ + A   P L  ++A+CY E  A  I+ MD+ ERR I   +G+ QGDG+GP LF   +  I+ K R +++ LGV L  Y+DD+ L    +T +N+Q I
Sbjct:    9 INDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAKAAKSVPNLVGYIARCYDEISAKSIYAMDSGERRTIECKSGVQQGDGMGPPLFFFILFPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAENIQVI 211          
BLAST of mRNA_H-paniculata_contig14815.2867.1 vs. uniprot
Match: A0A6H5KT19_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT19_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 1.160e-47
Identity = 85/203 (41.87%), Postives = 123/203 (60.59%), Query Frame = 0
Query:    1 MEQPDAVPPEFWELFFQSNLTALGEKYRPICVGSTMRRTLAAGVA-----KLEEVSLSERQYGVGVSGGAELMGLRTKAYCQLRHWLIALDYTNVFNSVKGAAVLKEVAICTPGLTPFVAKCYGEKPADIIFQMDTDERRRISSNTGIHQGDGLGPALFCMPVGTILRKCRQQFETLGVELLTYLDDLVLAMGELTEKNLQAI 198
            +  P+A PPEFW L+ QS+L ALGEK RP+C+G T RR +AAG       KLEE+     Q+GV V+GG E + +  +   Q  HW++  D +N  N+ K  A++ + A   P L   +A+CY E PA  I+ MD+ ERR I   +G+ QGDG+GP LFC  +  I+ K R +++ LGV L  Y+DD+ L    +T +++Q I
Sbjct:   98 INDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVTGGVEQVAMDAQLVDQTGHWVVQTDCSNGLNTGKRTAIMAQAAKSVPDLVGCIARCY-ELPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAESIQVI 299          
BLAST of mRNA_H-paniculata_contig14815.2867.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 2.710e-47
Identity = 85/201 (42.29%), Postives = 124/201 (61.69%), Query Frame = 0
Query:    1 MEQPDAVPPEFWELFFQSNLTALGEKYRPICVGSTMRRTLAAGVA-----KLEEVSLSERQYGVGVSGGAELMGLRTKAYCQLRHWLIALDYTNVFNSVKGAAVLKEVAICTPGLTPFVAKCYGEKPADIIFQMDTDERRRISSNTGIHQGDGLGPALFCMPVGTILRKCRQQFETLGVELLTYLDDLVLAMGELTEKNLQ 196
            ++ P A PPEFW L  QS+L ALGEK RP+C+G T RR +AAG       KLEE+     Q+GV V+GG E + +  +   Q  HW++  D +N FN+ K  A++ + +   P L  ++A+CY E PA  I+ MD+ ERR I   +G+ QGDG+GP LFC  +  I+ K R +++ LGV L  Y+DD+ L   ++T +N+Q
Sbjct:  420 IKDPHAFPPEFWTLLKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAIDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQ 620          
BLAST of mRNA_H-paniculata_contig14815.2867.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 2.230e-46
Identity = 82/203 (40.39%), Postives = 128/203 (63.05%), Query Frame = 0
Query:    1 MEQPDAVPPEFWELFFQSNLTALGEKYRPICVGSTMRRTLAAGVA-----KLEEVSLSERQYGVGVSGGAELMGLRTKAYCQLRHWLIALDYTNVFNSVKGAAVLKEVAICTPGLTPFVAKCYGEKPADIIFQMDTDERRRISSNTGIHQGDGLGPALFCMPVGTILRKCRQQFETLGVELLTYLDDLVLAMGELTEKNLQAI 198
            +  P+  PPEFW L+ QS+L ALGEK RP+C+G T RR +AAG       KLEE+     Q+GV V+GG E + +  +   Q  +W+I  D +N FN+ K  A++ + A   P L  ++A+CY E PA  +++MD+ ERR +   +G+ QGDG+GP LF + +  I+ K + +++ LGV    Y+DD+ L + +LTE+++QA+
Sbjct:  591 VNDPNTFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVRQWKPKLEEMFREANQFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHLKDLTEESVQAM 793          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14815.2867.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4Y4_9PHAE1.060e-5142.29Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KR59_9PHAE3.700e-4942.36Reverse transcriptase domain-containing protein (F... [more]
A0A6H5LL14_9PHAE7.760e-4942.65Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JI32_9PHAE4.890e-4842.86Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K0V7_9PHAE5.110e-4841.38Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KMQ2_9PHAE7.020e-4842.86Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KDD0_9PHAE9.890e-4841.87Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KT19_9PHAE1.160e-4741.87Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KKQ2_9PHAE2.710e-4742.29Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JH58_9PHAE2.230e-4640.39Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 25..191
e-value: 6.1E-13
score: 48.8
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..198
score: 10.659

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14815contigH-paniculata_contig14815:4792..5385 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14815.2867.1mRNA_H-paniculata_contig14815.2867.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14815 4792..5385 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14815.2867.1 ID=prot_H-paniculata_contig14815.2867.1|Name=mRNA_H-paniculata_contig14815.2867.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=198bp
MEQPDAVPPEFWELFFQSNLTALGEKYRPICVGSTMRRTLAAGVAKLEEV
SLSERQYGVGVSGGAELMGLRTKAYCQLRHWLIALDYTNVFNSVKGAAVL
KEVAICTPGLTPFVAKCYGEKPADIIFQMDTDERRRISSNTGIHQGDGLG
PALFCMPVGTILRKCRQQFETLGVELLTYLDDLVLAMGELTEKNLQAI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom