Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | mitochondrion |
| Ec32 ortholog description | Tetratricopeptide-like helical domain |
| Ec32 ortholog | Ec-04_005710.1 |
| Exons | 2 |
| Model size | 2487 |
| Cds size | 2385 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14813.2866.1 >prot_H-paniculata_contig14813.2866.1 ID=prot_H-paniculata_contig14813.2866.1|Name=mRNA_H-paniculata_contig14813.2866.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=795bp
MLVIIPCKFAQRASSSSRKCIAGRKLVDTTTAAAGAATARGGDGANSNPS
IHGLASGCTRAASFVAPARVPTTAGELSESPQQHAPVPWVVQHNSNSNGH
AGSGGGRRSGGGGGGGGGGADSSNFSSSSANRRGWWTRNFSYSNAEPEAV
VPNSNDSGLPPPENLAAAGGAGGAGAGAAAVAAAAVAAAASPPRAPKWGG
AHNERQRQAQQRVRRRRQIIPESEGVERSLEEAKQFTRHVTDFGMRRNWG
SILRLLAAAEQDGKSINLIMYNACISGLAKCRRWEEAIETLERMAAKGVA
PDVTGFTAAITACRNAKNWEMALQLMEEMRSVGVTPNAWTYHTTIQACAS
VGRVKEATSILTQMGEAGLKLTEHSFVCALDACRVAGNSEASEGLLRQMR
ALNIRPKVESYNMCMSAALTEKNWRRAVGILDEMEEYKVSPDFRSYTTAM
SACMSAGEVEMPLVLLDRMRRQSIANPWAYNICVNACSKAGNWERAVGLL
EDMRTAGVPPDAVSYPTAMDACVKAGQYDHALRLLEQMAADGLAPQYYSF
NIALNACSKAGLVDHALELLERMDKEGLPPDTLSYNSAISACARRGDWER
SLRLMRRMVESGLVPNVVTYTAAIGACDESGRWELAVELLDEMLSGGGEG
GARAIQPNEKAFAAAMGACKNGGRTDRALEVFEKLRQCGIQPGIVAYTAA
IDSCGLTGQWETALGLMAEMLAVGVEPNLLTYNAAVRACVRGRRWDLGMQ
LHRDMKKAGSGEDRAACKPDVVTFNALIRGLVPGTLVDDEWKRC* back to topmRNA from alignment at H-paniculata_contig14813:597..5051+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig14813.2866.1 ID=mRNA_H-paniculata_contig14813.2866.1|Name=mRNA_H-paniculata_contig14813.2866.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4455bp|location=Sequence derived from alignment at H-paniculata_contig14813:597..5051+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCCACACAGTCCCGCAACCGCGAGAAGCGGCCTCTGTGCTGTAGACTGGA
AAGCACGCTCAAACCAAGGCACTTGCTATGCTCGTTATCATACCCTGCAA
GTTCGCACAGCGCGCGTCGTCTTCGTCAAGAAAATGCATAGCGGGGAGAA
AGTTGGTCGACACAACAACAGCAGCGGCAGGGGCTGCCACAGCACGTGGT
GGTGATGGTGCGAATTCAAATCCTTCAATCCATGGCCTTGCATCAGGTTG
CACCCGCGCAGCGTCGTTCGTTGCTCCTGCGCGGGTCCCGACTACTGCCG
GGGAATTGTCAGAGTCTCCACAGCAGCATGCACCCGTGCCATGGGTCGTC
CAACATAACTCGAATTCAAATGGACATGCTGGGTCTGGCGGTGGTCGTCG
CAGCGGAGGCGGCGGAGGCGGCGGAGGCGGCGGTGCTGACAGTAGTAATT
TTAGTAGCAGCAGCGCGAACAGGCGAGGGTGGTGGACCAGAAACTTCAGC
TACAGCAACGCGGAACCAGAAGCGGTCGTACCGAATTCGAATGACAGCGG
TTTGCCCCCGCCGGAAAACTTGGCAGCAGCAGGAGGAGCAGGAGGAGCTG
GAGCTGGAGCAGCAGCAGTAGCAGCAGCAGCGGTGGCAGCGGCGGCAAGC
CCTCCTCGCGCGCCGAAGTGGGGCGGGGCTCACAATGAAAGACAGAGGCA
GGCACAGCAGCGAGTGCGGAGGAGACGACAAATCATTCCAGAGTCTGAGG
GCGTTGAGCGTAGCCTTGAAGAAGCCAAGCAGTTCACGCGGCATGTGAGT
TTCTATTGCTTGATTGAACTGTAGTCAATAATCTGCGGTCCTGATAGTTG
TTACTCACAGAGTGTTGCAAAACCAAAGGATGATGAAGCTTGTAAAGAGA
TGTAACAAGTTTCCCTAGGAAAGTGACATTTTCCACTTGTTTTTCTCCTA
GGAAATTCACCATTCCTACGCTGCTCGCTCGAAAACCGCAGGTCCAAAAT
TATGCAGGCGCCATGCACATAAATTTTATAGCAAGTACAGTTCCATCCAC
TCTTTTGATCACTCACCGGTTACCCAGGGCGATCGCCTCGGAGCCAACGT
GTGTAGAGCATGACAAGTGTCGATGTACAGCCAATGAGAGCGAGTTTTCT
CTTTTCGAGAGCACCCGTGTTCTCTCACAAGGCACATCAGTGTAGACAGC
AATATCCAGTCAGTTCGGTACAGAAAGTTCGTTATTTCGTACATTTTTAT
CTACGCTTCACAATATTCAAATCATTTGTCGACCTAAAAAGTCCATGTGG
AGAGGTGTTCACATTTACATCCCATTTTAGCTGATCCAAAATTCGTAATG
GCCACGTGGCCTTCGACAAAACTTGGGCTATCGTTCGGTACAAATGGTGA
GCAAATCCGTTCGATCGCCCCTGATGTCAGTAATCGGTGGGTCTGGACCA
CCATCCAGGTGCTGCTGCATCGCTGGACTCCGAGAGAGGCTGTCTGGTTT
CTTAGCTCTCATGTAGTTTCCTGTCCCAATTTTCAATCAAACCGTCGGAA
TGAGACTTCCATACGTCTCTCTAGTGCGCACTCCTAGGTTGGGCAGTTAT
AGGGGCGTCTTGCGACACCGCAAAATGATGTCGAATTTCGAGTCCGTTTG
TAGCCTACCCTCTGGATCACGACTAGTCGTGGCACATGTGCGGGAAAGGG
GGCCATATTCACAATGGGTCACAGATCCTCAAGGCGCGTGATTCCCCTGT
CTCTAGGCTGCCTTACGGCCCACTGTAACACTAAATTGAAGCAGTGTGTA
CCATGGTCCGGCGGATAAGTTCTAACCCCCTCACGCTTGACGTGGTCTAC
TTATGGTCGACACCCAGGGTTCAACCCTAATTAAACTGGATTGCTGTATT
CGATTGATGTTGCACTAGTCATGCCAAATGAGCGGGGTAGTATTCATTCT
TGTGAGTGAGAGATGTGTGAGGTGTGGCAGGTGCTGCATGGTGTGTGGTA
ACCGGCTACCATCAGTCATAGGACTCTCTGCATGCGTACAGTAAACCCTG
CACAAGAAATAGATGGGTTTGGGAACTTTTGTCTCCAAAGAAAAAAATGT
CGAAAATGTCGGAAACTTCCGTCTACTTGGGCTTTTTGAGGCGGTCTGGA
GAAAATGGGGGGAACGCTCTTTCGAAAAAACTTCTCGATAACTTGTACAA
AGGTTTCTTTTCGGGGAGGCTTTTTTGTCCCAAAGAAATCCTTTTTTCAC
AAACCTCCTTCAACAAAACCCCCACAAGGGGCTATCCTTTCAGCAAGAGC
TGTGCGACCCACCTTCTGCTCACTTTGTTGTCACCGCTAGTCCTATAGTG
GTAGCTTTTTACAGTATGGGCAGATTTTATTTTGGGTGGCAAGTAACGTG
TTCTCCGTTGCTCGATACGAGAAAGTGTGCATAAAGGGGGACGAACTATT
GGAAGGGCCGAGATTGGACGACAGTCGATCTAGATTCAGACTGCTGGATA
CTGCCATGTACAGCCTCACGACATCAGCCTGACGCGGAACTCGACGGCAT
GGTTTTCAAGGTTTTTTACTGTGTGGACTTTCCCCTGATCACAATAGGTC
GGCGTTGTCATTTTTTGTGATGCGGGTGTTTCCGCTCGTCTTCTGCTAAT
AATACCCGATGAAATGGCTTGTTCCCTGATGTCGTTATTCATCCTTCCTA
TTTTCGTTTTCTTTAGTACCTCTCTTTCTCTATATGTCTCTTTCCGTCTT
TTTCTCTCCCAGGTGACCGACTTCGGAATGCGGAGGAATTGGGGTTCTAT
CCTTCGCCTCCTAGCCGCCGCGGAACAAGACGGGAAATCGATCAACCTCA
TCATGTATAACGCGTGCATATCGGGGTTGGCTAAGTGCAGGCGCTGGGAA
GAGGCCATCGAGACGCTGGAGAGAATGGCTGCCAAGGGCGTGGCGCCGGA
TGTGACCGGTTTCACTGCGGCGATCACGGCGTGCCGGAACGCTAAAAACT
GGGAAATGGCCCTGCAACTCATGGAGGAGATGCGCAGCGTCGGGGTCACC
CCGAACGCGTGGACCTACCATACGACCATTCAGGCGTGCGCCTCGGTGGG
GCGGGTCAAAGAAGCGACATCTATCCTCACCCAGATGGGCGAGGCGGGCT
TGAAGCTTACGGAGCATAGCTTCGTCTGTGCGCTCGATGCTTGCCGCGTC
GCGGGGAACAGCGAGGCCTCCGAGGGACTGCTGCGGCAAATGCGCGCGTT
GAACATCAGGCCCAAGGTGGAGAGCTACAATATGTGCATGAGCGCCGCAC
TGACCGAGAAAAACTGGCGGCGCGCCGTCGGAATTTTGGACGAGATGGAG
GAGTACAAGGTGAGCCCGGACTTCAGGAGCTACACCACCGCGATGAGCGC
GTGCATGTCAGCGGGCGAGGTGGAGATGCCGCTGGTGCTGCTGGACAGGA
TGCGCCGGCAGTCGATCGCGAACCCGTGGGCGTACAATATCTGTGTGAAT
GCGTGCTCGAAGGCGGGGAACTGGGAGCGGGCGGTTGGCCTGCTGGAGGA
CATGAGGACCGCCGGTGTGCCGCCCGACGCGGTGAGCTATCCCACCGCAA
TGGATGCGTGTGTCAAGGCCGGGCAGTATGATCACGCGCTTCGCCTGCTC
GAGCAGATGGCGGCAGACGGCTTGGCGCCCCAGTATTACTCGTTCAACAT
AGCGCTTAATGCGTGTAGCAAGGCGGGCCTCGTGGACCACGCGCTGGAGC
TGCTGGAGCGGATGGATAAAGAAGGCTTGCCCCCCGACACATTGAGTTAC
AACTCCGCGATCTCGGCGTGCGCGAGGCGCGGAGACTGGGAGCGGTCTTT
GAGGTTGATGCGGCGGATGGTGGAGTCGGGTCTCGTCCCGAACGTGGTGA
CATACACGGCGGCGATCGGCGCTTGCGATGAGAGCGGGCGGTGGGAGCTG
GCGGTGGAGCTTCTGGACGAGATGCTCTCTGGAGGGGGCGAAGGGGGTGC
GAGGGCGATACAGCCGAACGAGAAAGCATTCGCCGCCGCCATGGGCGCGT
GCAAGAACGGAGGGCGCACCGACCGCGCCTTGGAAGTCTTCGAAAAGCTG
CGGCAGTGCGGCATACAGCCGGGTATAGTGGCGTACACGGCCGCGATTGA
CAGCTGCGGGTTAACCGGGCAGTGGGAGACAGCGCTGGGCTTGATGGCAG
AGATGCTTGCGGTGGGCGTGGAGCCCAACTTGCTCACGTACAACGCCGCG
GTTCGCGCGTGCGTGAGGGGTCGCCGGTGGGACTTGGGCATGCAGTTGCA
CCGCGATATGAAAAAGGCAGGCTCCGGGGAGGACCGGGCTGCGTGCAAGC
CGGATGTTGTGACCTTCAACGCGCTCATCAGAGGTCTCGTGCCGGGCACG
CTTGTAGATGATGAGTGGAAAAGATGTTGAGAACGGGAGCGGAGGTCTAC
GGGCC back to topCoding sequence (CDS) from alignment at H-paniculata_contig14813:597..5051+ >mRNA_H-paniculata_contig14813.2866.1 ID=mRNA_H-paniculata_contig14813.2866.1|Name=mRNA_H-paniculata_contig14813.2866.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4770bp|location=Sequence derived from alignment at H-paniculata_contig14813:597..5051+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTCGTTATCATACCCTGCAAGTTCGCACAGCGCGCGTCGTCTTCGTC
AAGAAAATGCATAGCGGGGAGAAAGTTGGTCGACACAACAACAGCAGCGG
CAGGGGCTGCCACAGCACGTGGTGGTGATGGTGCGAATTCAAATCCTTCA
ATCCATGGCCTTGCATCAGGTTGCACCCGCGCAGCGTCGTTCGTTGCTCC
TGCGCGGGTCCCGACTACTGCCGGGGAATTGTCAGAGTCTCCACAGCAGC
ATGCACCCGTGCCATGGGTCGTCCAACATAACTCGAATTCAAATGGACAT
GCTGGGTCTGGCGGTGGTCGTCGCAGCGGAGGCGGCGGAGGCGGCGGAGG
CGGCGGTGCTGACAGTAGTAATTTTAGTAGCAGCAGCGCGAACAGGCGAG
GGTGGTGGACCAGAAACTTCAGCTACAGCAACGCGGAACCAGAAGCGGTC
GTACCGAATTCGAATGACAGCGGTTTGCCCCCGCCGGAAAACTTGGCAGC
AGCAGGAGGAGCAGGAGGAGCTGGAGCTGGAGCAGCAGCAGTAGCAGCAG
CAGCGGTGGCAGCGGCGGCAAGCCCTCCTCGCGCGCCGAAGTGGGGCGGG
GCTCACAATGAAAGACAGAGGCAGGCACAGCAGCGAGTGCGGAGGAGACG
ACAAATCATTCCAGAGTCTGAGGGCGTTGAGCGTAGCCTTGAAGAAGCCA
AGCAGTTCACGCGGCATATGCTCGTTATCATACCCTGCAAGTTCGCACAG
CGCGCGTCGTCTTCGTCAAGAAAATGCATAGCGGGGAGAAAGTTGGTCGA
CACAACAACAGCAGCGGCAGGGGCTGCCACAGCACGTGGTGGTGATGGTG
CGAATTCAAATCCTTCAATCCATGGCCTTGCATCAGGTTGCACCCGCGCA
GCGTCGTTCGTTGCTCCTGCGCGGGTCCCGACTACTGCCGGGGAATTGTC
AGAGTCTCCACAGCAGCATGCACCCGTGCCATGGGTCGTCCAACATAACT
CGAATTCAAATGGACATGCTGGGTCTGGCGGTGGTCGTCGCAGCGGAGGC
GGCGGAGGCGGCGGAGGCGGCGGTGCTGACAGTAGTAATTTTAGTAGCAG
CAGCGCGAACAGGCGAGGGTGGTGGACCAGAAACTTCAGCTACAGCAACG
CGGAACCAGAAGCGGTCGTACCGAATTCGAATGACAGCGGTTTGCCCCCG
CCGGAAAACTTGGCAGCAGCAGGAGGAGCAGGAGGAGCTGGAGCTGGAGC
AGCAGCAGTAGCAGCAGCAGCGGTGGCAGCGGCGGCAAGCCCTCCTCGCG
CGCCGAAGTGGGGCGGGGCTCACAATGAAAGACAGAGGCAGGCACAGCAG
CGAGTGCGGAGGAGACGACAAATCATTCCAGAGTCTGAGGGCGTTGAGCG
TAGCCTTGAAGAAGCCAAGCAGTTCACGCGGCATGTGACCGACTTCGGAA
TGCGGAGGAATTGGGGTTCTATCCTTCGCCTCCTAGCCGCCGCGGAACAA
GACGGGAAATCGATCAACCTCATCATGTATAACGCGTGCATATCGGGGTT
GGCTAAGTGCAGGCGCTGGGAAGAGGCCATCGAGACGCTGGAGAGAATGG
CTGCCAAGGGCGTGGCGCCGGATGTGACCGGTTTCACTGCGGCGATCACG
GCGTGCCGGAACGCTAAAAACTGGGAAATGGCCCTGCAACTCATGGAGGA
GATGCGCAGCGTCGGGGTCACCCCGAACGCGTGGACCTACCATACGACCA
TTCAGGCGTGCGCCTCGGTGGGGCGGGTCAAAGAAGCGACATCTATCCTC
ACCCAGATGGGCGAGGCGGGCTTGAAGCTTACGGAGCATAGCTTCGTCTG
TGCGCTCGATGCTTGCCGCGTCGCGGGGAACAGCGAGGCCTCCGAGGGAC
TGCTGCGGCAAATGCGCGCGTTGAACATCAGGCCCAAGGTGGAGAGCTAC
AATATGTGCATGAGCGCCGCACTGACCGAGAAAAACTGGCGGCGCGCCGT
CGGAATTTTGGACGAGATGGAGGAGTACAAGGTGAGCCCGGACTTCAGGA
GCTACACCACCGCGATGAGCGCGTGCATGTCAGCGGGCGAGGTGGAGATG
CCGCTGGTGCTGCTGGACAGGATGCGCCGGCAGTCGATCGCGAACCCGTG
GGCGTACAATATCTGTGTGAATGCGTGCTCGAAGGCGGGGAACTGGGAGC
GGGCGGTTGGCCTGCTGGAGGACATGAGGACCGCCGGTGTGCCGCCCGAC
GCGGTGAGCTATCCCACCGCAATGGATGCGTGTGTCAAGGCCGGGCAGTA
TGATCACGCGCTTCGCCTGCTCGAGCAGATGGCGGCAGACGGCTTGGCGC
CCCAGTATTACTCGTTCAACATAGCGCTTAATGCGTGTAGCAAGGCGGGC
CTCGTGGACCACGCGCTGGAGCTGCTGGAGCGGATGGATAAAGAAGGCTT
GCCCCCCGACACATTGAGTTACAACTCCGCGATCTCGGCGTGCGCGAGGC
GCGGAGACTGGGAGCGGTCTTTGAGGTTGATGCGGCGGATGGTGGAGTCG
GGTCTCGTCCCGAACGTGGTGACATACACGGCGGCGATCGGCGCTTGCGA
TGAGAGCGGGCGGTGGGAGCTGGCGGTGGAGCTTCTGGACGAGATGCTCT
CTGGAGGGGGCGAAGGGGGTGCGAGGGCGATACAGCCGAACGAGAAAGCA
TTCGCCGCCGCCATGGGCGCGTGCAAGAACGGAGGGCGCACCGACCGCGC
CTTGGAAGTCTTCGAAAAGCTGCGGCAGTGCGGCATACAGCCGGGTATAG
TGGCGTACACGGCCGCGATTGACAGCTGCGGGTTAACCGGGCAGTGGGAG
ACAGCGCTGGGCTTGATGGCAGAGATGCTTGCGGTGGGCGTGGAGCCCAA
CTTGCTCACGTACAACGCCGCGGTTCGCGCGTGCGTGAGGGGTCGCCGGT
GGGACTTGGGCATGCAGTTGCACCGCGATATGAAAAAGGCAGGCTCCGGG
GAGGACCGGGCTGCGTGCAAGCCGGATGTTGTGACCTTCAACGCGCTCAT
CAGAGGTCTCGTGCCGGGCACGCTTGTAGATGATGAGTGGAAAAGATGTT
GAGTGACCGACTTCGGAATGCGGAGGAATTGGGGTTCTATCCTTCGCCTC
CTAGCCGCCGCGGAACAAGACGGGAAATCGATCAACCTCATCATGTATAA
CGCGTGCATATCGGGGTTGGCTAAGTGCAGGCGCTGGGAAGAGGCCATCG
AGACGCTGGAGAGAATGGCTGCCAAGGGCGTGGCGCCGGATGTGACCGGT
TTCACTGCGGCGATCACGGCGTGCCGGAACGCTAAAAACTGGGAAATGGC
CCTGCAACTCATGGAGGAGATGCGCAGCGTCGGGGTCACCCCGAACGCGT
GGACCTACCATACGACCATTCAGGCGTGCGCCTCGGTGGGGCGGGTCAAA
GAAGCGACATCTATCCTCACCCAGATGGGCGAGGCGGGCTTGAAGCTTAC
GGAGCATAGCTTCGTCTGTGCGCTCGATGCTTGCCGCGTCGCGGGGAACA
GCGAGGCCTCCGAGGGACTGCTGCGGCAAATGCGCGCGTTGAACATCAGG
CCCAAGGTGGAGAGCTACAATATGTGCATGAGCGCCGCACTGACCGAGAA
AAACTGGCGGCGCGCCGTCGGAATTTTGGACGAGATGGAGGAGTACAAGG
TGAGCCCGGACTTCAGGAGCTACACCACCGCGATGAGCGCGTGCATGTCA
GCGGGCGAGGTGGAGATGCCGCTGGTGCTGCTGGACAGGATGCGCCGGCA
GTCGATCGCGAACCCGTGGGCGTACAATATCTGTGTGAATGCGTGCTCGA
AGGCGGGGAACTGGGAGCGGGCGGTTGGCCTGCTGGAGGACATGAGGACC
GCCGGTGTGCCGCCCGACGCGGTGAGCTATCCCACCGCAATGGATGCGTG
TGTCAAGGCCGGGCAGTATGATCACGCGCTTCGCCTGCTCGAGCAGATGG
CGGCAGACGGCTTGGCGCCCCAGTATTACTCGTTCAACATAGCGCTTAAT
GCGTGTAGCAAGGCGGGCCTCGTGGACCACGCGCTGGAGCTGCTGGAGCG
GATGGATAAAGAAGGCTTGCCCCCCGACACATTGAGTTACAACTCCGCGA
TCTCGGCGTGCGCGAGGCGCGGAGACTGGGAGCGGTCTTTGAGGTTGATG
CGGCGGATGGTGGAGTCGGGTCTCGTCCCGAACGTGGTGACATACACGGC
GGCGATCGGCGCTTGCGATGAGAGCGGGCGGTGGGAGCTGGCGGTGGAGC
TTCTGGACGAGATGCTCTCTGGAGGGGGCGAAGGGGGTGCGAGGGCGATA
CAGCCGAACGAGAAAGCATTCGCCGCCGCCATGGGCGCGTGCAAGAACGG
AGGGCGCACCGACCGCGCCTTGGAAGTCTTCGAAAAGCTGCGGCAGTGCG
GCATACAGCCGGGTATAGTGGCGTACACGGCCGCGATTGACAGCTGCGGG
TTAACCGGGCAGTGGGAGACAGCGCTGGGCTTGATGGCAGAGATGCTTGC
GGTGGGCGTGGAGCCCAACTTGCTCACGTACAACGCCGCGGTTCGCGCGT
GCGTGAGGGGTCGCCGGTGGGACTTGGGCATGCAGTTGCACCGCGATATG
AAAAAGGCAGGCTCCGGGGAGGACCGGGCTGCGTGCAAGCCGGATGTTGT
GACCTTCAACGCGCTCATCAGAGGTCTCGTGCCGGGCACGCTTGTAGATG
ATGAGTGGAAAAGATGTTGA back to top
|