mRNA_H-paniculata_contig147.2803.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig147.2803.1 vs. uniprot
Match: A0A6H5KB20_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB20_9PHAE) HSP 1 Score: 218 bits (555), Expect = 3.310e-63 Identity = 106/134 (79.10%), Postives = 115/134 (85.82%), Query Frame = 1 Query: 7 QALVLSEPTVFLGALWIPHIRNNTAMEAVLSSDEARNARVIFCHVDITGASMNDGVSSHAGIPRSAFPSNVSTFSGHFHKPHTVG--DGFIRYVGSPYQTCLSESGQSKALLVLDADTWAEKEAIPLSIGRRFF 402 QALVLSEPT+FLGALWIPH RNNT ME +L S+EAR AR IFCHVDI GA+MN VSSH+GIPRSAFP NV FSGH HKPHT+G DGFIRYVGSPYQT LSESGQSKAL+VLDA+TW EKE +PL IGRRFF Sbjct: 479 QALVLSEPTLFLGALWIPHRRNNTEMEGLLGSEEARGARAIFCHVDIKGAAMNGDVSSHSGIPRSAFPPNVPAFSGHVHKPHTLGGRDGFIRYVGSPYQTALSESGQSKALIVLDAETWEEKELVPLDIGRRFF 612
BLAST of mRNA_H-paniculata_contig147.2803.1 vs. uniprot
Match: D7FQ73_ECTSI (DNA double-strand break repair rad50 ATPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ73_ECTSI) HSP 1 Score: 217 bits (552), Expect = 8.380e-63 Identity = 106/134 (79.10%), Postives = 114/134 (85.07%), Query Frame = 1 Query: 7 QALVLSEPTVFLGALWIPHIRNNTAMEAVLSSDEARNARVIFCHVDITGASMNDGVSSHAGIPRSAFPSNVSTFSGHFHKPHTVG--DGFIRYVGSPYQTCLSESGQSKALLVLDADTWAEKEAIPLSIGRRFF 402 QALVLSEPT+FLGALWIPH RNNT ME +L SDEAR A IFCHVDI GA+MN VSSH+GIPRSAFP NV FSGH HKPHT+G DGFIRYVGSPYQT LSESGQSKAL+VLDA+TW EKE +PL IGRRFF Sbjct: 479 QALVLSEPTLFLGALWIPHRRNNTEMEGLLGSDEARGAGAIFCHVDIKGAAMNGDVSSHSGIPRSAFPPNVPAFSGHVHKPHTLGGRDGFIRYVGSPYQTALSESGQSKALIVLDAETWEEKELVPLDIGRRFF 612
BLAST of mRNA_H-paniculata_contig147.2803.1 vs. uniprot
Match: A0A836CHZ6_9STRA (Metallophos domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHZ6_9STRA) HSP 1 Score: 169 bits (428), Expect = 4.190e-46 Identity = 75/132 (56.82%), Postives = 100/132 (75.76%), Query Frame = 1 Query: 7 QALVLSEPTVFLGALWIPHIRNNTAMEAVLSSDEARNARVIFCHVDITGASMNDGVSSHAGIPRSAFPSNVSTFSGHFHKPHTVGDGFIRYVGSPYQTCLSESGQSKALLVLDADTWAEKEAIPLSIGRRFF 402 A+V+S+PT+FLGALW+PH R+ A+E VL+ A AR +FCHVD GA+MNDG+ S GI SAFP+ +SGHFH+PH+VG G +RYVGSPYQT L+E+GQ K LL+LDA W+ ++A+ + +GRRFF Sbjct: 380 HAVVISQPTLFLGALWLPHCRDQRALERVLALPAAAAARAVFCHVDARGAAMNDGIYSRTGISPSAFPAGARVYSGHFHRPHSVGGGRVRYVGSPYQTSLAEAGQRKELLILDAADWSVRDAVEICVGRRFF 511
BLAST of mRNA_H-paniculata_contig147.2803.1 vs. uniprot
Match: B8CBT2_THAPS (ABC transporter (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBT2_THAPS) HSP 1 Score: 137 bits (345), Expect = 6.140e-35 Identity = 70/133 (52.63%), Postives = 93/133 (69.92%), Query Frame = 1 Query: 4 PQALVLSEPTVFLGALWIPHIRNNTAMEAVLSSDEARNARVIFCHVDITGASMNDGVSSHAGIPRSAFPSNVSTFSGHFHKPHTVGDGFIRYVGSPYQTCLSESGQSKALLVLDAD-TWAEKEAIPLSIGRRF 399 P L+ S PT F AL++PHIR+ + M+AVLSS EA N+ +F H D+ GASMND + S G+ S FPS+ +SGHFHKPH V +YVGSPYQT LSE+GQSK+L+++D++ W E IP+ IGRR+ Sbjct: 98 PGPLIFSHPTKFKDALFVPHIRDKSTMKAVLSSKEAINSSALFVHADVKGASMNDLIKSQHGLSASFFPSDRYVYSGHFHKPHFVQLS-KKYVGSPYQTSLSEAGQSKSLILVDSEQNWKCVEEIPIDIGRRY 229
BLAST of mRNA_H-paniculata_contig147.2803.1 vs. uniprot
Match: K0RAD6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RAD6_THAOC) HSP 1 Score: 136 bits (342), Expect = 1.590e-34 Identity = 67/136 (49.26%), Postives = 90/136 (66.18%), Query Frame = 1 Query: 4 PQALVLSEPTVFLGALWIPHIRNNTAMEAVLSSDEARNARVIFCHVDITGASMNDGVSSHAGIPRSAFPSNVSTFSGHFHKPHTV--GDGFIRYVGSPYQTCLSESGQSKALLVLDADT-WAEKEAIPLSIGRRFF 402 P ++ S PT FL AL++PHIR+ M+ +LSS+EA + +F H D+ GASMND + S GI S FP N +SGHFHKPH + G +RYVGSPYQT LSE GQ K+LL+LD+ W + IP+ +G +F+ Sbjct: 369 PGPMIFSHPTKFLDALFVPHIRDKAKMQTILSSEEAIASEALFVHADVRGASMNDLILSQHGISSSNFPPNKLIYSGHFHKPHAITGGASTLRYVGSPYQTSLSECGQQKSLLLLDSQLKWDCVQEIPIDVGPKFY 504
BLAST of mRNA_H-paniculata_contig147.2803.1 vs. uniprot
Match: A0A4D9DAR7_9STRA (Metallophos domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAR7_9STRA) HSP 1 Score: 126 bits (317), Expect = 3.730e-31 Identity = 64/147 (43.54%), Postives = 91/147 (61.90%), Query Frame = 1 Query: 7 QALVLSEPTVFLGALWIPHIRNNTAMEAVLSS------DEARNAR----VIFCHVDITGASMNDGVSSHAGIPRSAFPSNVSTFSGHFHKPHTVGDGFIRYVGSPYQTCLSESGQSKALLVL-----DADTWAEKEAIPLSIGRRFF 402 QALV+S+PT+FL ALW+P+ R++ + A L++ EA ++ +FCHVD+ GA ND +S G+ FPS++ T+SGHFH+PH V + YVGSPYQ L+E+GQ K LL+L D W E I + +GRR+F Sbjct: 232 QALVVSQPTLFLNALWLPYARDSASTRAFLAAYRDPIEQEAGSSPPPVGAVFCHVDVRGAPTNDNTASRRGLNPGIFPSHIPTYSGHFHRPHRVPASSVTYVGSPYQVSLAEAGQRKRLLLLRRPLGPGDPWMEVSDIAIDVGRRYF 378
BLAST of mRNA_H-paniculata_contig147.2803.1 vs. uniprot
Match: A0A448ZKB3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZKB3_9STRA) HSP 1 Score: 125 bits (314), Expect = 9.380e-31 Identity = 65/136 (47.79%), Postives = 89/136 (65.44%), Query Frame = 1 Query: 4 PQALVLSEPTVFLGALWIPHIRNNTAMEAVLSSDEARNARVIFCHVDITGASMNDGVSSHAGIPRSAFPSNVSTFSGHFHKPHTVGDGF---IRYVGSPYQTCLSESGQSKALLVLDADTWAEKEAIPLSIGRRFF 402 P LVLS PT F AL++PH+R+ AM+A+LSS E +++ +F H ++ GA MND V S GI S FP + +SGHFH PH+V I YVGSPYQ L+E+ Q K L+VL+ + W ++ IP+S+GRR F Sbjct: 271 PGPLVLSHPTRFRNALFVPHVRDINAMKAILSSRECQDSSALFLHAEVKGALMNDMVVSTQGISPSMFPMHKHVYSGHFHNPHSVKSSLCSTIEYVGSPYQISLAEAHQEKQLVVLN-EKWECQKRIPISVGRRHF 405
BLAST of mRNA_H-paniculata_contig147.2803.1 vs. uniprot
Match: A0A7S3V904_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V904_9STRA) HSP 1 Score: 124 bits (311), Expect = 2.400e-30 Identity = 65/138 (47.10%), Postives = 89/138 (64.49%), Query Frame = 1 Query: 4 PQALVLSEPTVFLGALWIPHIRNNTAMEAVLSSDEARNARVIFCHVDITGASMNDGVSSHAGIPRSAFPSNVSTFSGHFHKPHTV-----GDGF-IRYVGSPYQTCLSESGQSKALLVLDAD-TWAEKEAIPLSIGRR 396 P L+ S PT F AL++PHIR+ M++VL S + ++ +F H D+TGA MND + S GI + FP ++ +SGHFHKPHT+ G IRYVGSPY+T LSE+GQ KALLVLD+ W + LS+G++ Sbjct: 423 PGILIFSVPTKFQNALFVPHIRDTGTMQSVLQSKVSASSSAVFVHADVTGAYMNDSIISTHGIAPAYFPPSIPIYSGHFHKPHTIVKPEAAPGVSIRYVGSPYETTLSEAGQKKALLVLDSSHNWECIDESALSLGKK 560
BLAST of mRNA_H-paniculata_contig147.2803.1 vs. uniprot
Match: A0A2P6TLS2_CHLSO (ABC transporter (ISS) isoform A n=3 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TLS2_CHLSO) HSP 1 Score: 122 bits (306), Expect = 1.140e-29 Identity = 59/137 (43.07%), Postives = 83/137 (60.58%), Query Frame = 1 Query: 1 SPQALVLSEPTVFLGALWIPHIRNNTAMEAVLSSDEARNA--RVIFCHVDITGASMNDGVSSHAGIPRSAFPSNVSTFSGHFHKPHTVGDGFIRYVGSPYQTCLSESGQSKALLVLD-ADTWAEKEAIPLSIGRRFF 402 +P P +FL ALW+P+ R+ A+EA L++ A R +F H DI GA MN+ +H G+P FP+ + T++GH+HKPHTV I Y+GSPYQ +E+GQ K LL+LD A W + +PL G R+F Sbjct: 181 NPAIHAFDGPALFLDALWLPYRRDPAALEAALAAASEGQAPLRAVFAHADIVGAMMNEAYQAHDGLPPELFPAGIPTYTGHYHKPHTVAGTRITYIGSPYQVTRAEAGQRKRLLLLDRAAGWEAVDQLPLDAGPRYF 317
BLAST of mRNA_H-paniculata_contig147.2803.1 vs. uniprot
Match: A0A7S3M1A4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M1A4_9STRA) HSP 1 Score: 116 bits (290), Expect = 6.990e-28 Identity = 63/156 (40.38%), Postives = 87/156 (55.77%), Query Frame = 1 Query: 7 QALVLSEPTVFLGALWIPHIRNNTAMEAVLSSD-EARNARVIFCHVDITGASMNDGVSSHAGIPRSAFPSNVSTFSGHFHKPHTVGDG--FIRYVGSPYQTCLSESGQSK------------------ALLVLD---ADTWAEKEAIPLSIGRRFF 402 Q L++ EP + +GALW+P+ R+ + A L + ++ +IFCH D+ GA MND + S G+ ++FP N+ +SGHFHKPHT+ G +RYVGSPYQT LSE+GQ K A V D +TW E E IGR+ F Sbjct: 112 QILIIDEPAISMGALWVPYRRDLNVLRAALRAGADSPGVSMIFCHADVKGAYMNDNMRSKEGLDIASFPKNIPIYSGHFHKPHTICQGRTTLRYVGSPYQTSLSEAGQEKYFYCVQRGNHGVVAGVEAAASVADYEQPETWKEVERWVCDIGRKIF 267 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig147.2803.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig147.2803.1 >prot_H-paniculata_contig147.2803.1 ID=prot_H-paniculata_contig147.2803.1|Name=mRNA_H-paniculata_contig147.2803.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=134bp SPQALVLSEPTVFLGALWIPHIRNNTAMEAVLSSDEARNARVIFCHVDITback to top mRNA from alignment at H-paniculata_contig147:14984..16254- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig147.2803.1 ID=mRNA_H-paniculata_contig147.2803.1|Name=mRNA_H-paniculata_contig147.2803.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1271bp|location=Sequence derived from alignment at H-paniculata_contig147:14984..16254- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig147:14984..16254- >mRNA_H-paniculata_contig147.2803.1 ID=mRNA_H-paniculata_contig147.2803.1|Name=mRNA_H-paniculata_contig147.2803.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=804bp|location=Sequence derived from alignment at H-paniculata_contig147:14984..16254- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |