mRNA_H-paniculata_contig14694.2801.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14694.2801.1 vs. uniprot
Match: D8LR49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR49_ECTSI) HSP 1 Score: 372 bits (954), Expect = 1.770e-114 Identity = 235/283 (83.04%), Postives = 249/283 (87.99%), Query Frame = 1 Query: 1 MQVFGTPLVCRVVPMTGRQLYDKLYRRFHRFLRLKEATTAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFDDGKEVDV------RPCMGTSEDSDCPSSVRATSMWVAAGDVNHWGFRLRLVNSSGTACSRCRWTEGCVGCFIPPNDELCPVRAGDSVGVDWHISVFKEHYDASEAMACLLHSSLALHKDMEARPLSLEKCLDTFTAQEDIKEGYCSRCKEFRNASKKMDIWRLPPILAIHLKRFQYTQYSRRKLRNLVH 831 ++VFGTPLVCRVVPMTGRQLYDKLYRRFHRFLRLK +A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +PCMGT +D DCP +VRATS WVAAG+VN WGFRLRLV S+G ACSRCRWTEGCVGCFI P+D CPVRAGDSVGVDWHISV KEHYDASEA++CLLHSS+ALHKD+EARPLSLEKCLDTFTAQEDIKEGYCSRCKEFRNASKKMD+WRLPPILAI LKRFQYTQYSRRKLRN VH Sbjct: 1377 LEVFGTPLVCRVVPMTGRQLYDKLYRRFHRFLRLKAGGVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVQQPCMGTGDDRDCPQTVRATSAWVAAGEVNRWGFRLRLVESNGYACSRCRWTEGCVGCFIRPDDTPCPVRAGDSVGVDWHISVIKEHYDASEALSCLLHSSIALHKDLEARPLSLEKCLDTFTAQEDIKEGYCSRCKEFRNASKKMDVWRLPPILAIQLKRFQYTQYSRRKLRNNVH 1659
BLAST of mRNA_H-paniculata_contig14694.2801.1 vs. uniprot
Match: A0A6H5KLB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLB3_9PHAE) HSP 1 Score: 367 bits (943), Expect = 6.290e-113 Identity = 231/286 (80.77%), Postives = 245/286 (85.66%), Query Frame = 1 Query: 1 MQVFGTPLVCRVVPMTGRQLYDKLYRRFHRFLRLKEATTAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFDDGKEVDV---------RPCMGTSEDSDCPSSVRATSMWVAAGDVNHWGFRLRLVNSSGTACSRCRWTEGCVGCFIPPNDELCPVRAGDSVGVDWHISVFKEHYDASEAMACLLHSSLALHKDMEARPLSLEKCLDTFTAQEDIKEGYCSRCKEFRNASKKMDIWRLPPILAIHLKRFQYTQYSRRKLRNLVH 831 ++VFGTPLVCRVVPMTGRQLYDKLYRRFHRFLRLK + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PCMGT +D DCP +VRATS WVAAG+VN WGFRLRLV S+G ACSRCRWTEGCVGCFI P+D+ CPVRAGDSVGVDWHISV KEHYD SEA++CLLHSS+ALHKD+EARPLSLEKCLDTFTAQEDIKEGYCSRCKEFRNASKKMD+WRLPPILAI LKRFQYTQYSRRKLRN VH Sbjct: 1545 LEVFGTPLVCRVVPMTGRQLYDKLYRRFHRFLRLKAGGVSPASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVQHPCMGTGDDRDCPQTVRATSAWVAAGEVNRWGFRLRLVESNGYACSRCRWTEGCVGCFIRPDDKPCPVRAGDSVGVDWHISVIKEHYDPSEALSCLLHSSIALHKDLEARPLSLEKCLDTFTAQEDIKEGYCSRCKEFRNASKKMDVWRLPPILAIQLKRFQYTQYSRRKLRNNVH 1830
BLAST of mRNA_H-paniculata_contig14694.2801.1 vs. uniprot
Match: A0A835YVN1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVN1_9STRA) HSP 1 Score: 231 bits (590), Expect = 1.530e-65 Identity = 129/280 (46.07%), Postives = 157/280 (56.07%), Query Frame = 1 Query: 1 MQVFGTPLVCRVV---PMTGRQLYDKLYRRFHRFLRLKEATTAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFDDGKEVDVRPCMGTSEDSDCPSSVRAT-SMWVAAGDVNHWGFRLRLVNSSGTACSRCRWTEGCVGCFIPPNDELCPVRAGDSVGVDWHISVFKEHYDASEAMACLLHSSLALHKDMEARPLSLEKCLDTFTAQEDIKEGYCSRCKEFRNASKKMDIWRLPPILAIHLKRFQYTQYSRRKLRNLV 828 +QVFGTPLVC P TGRQLYD L +RF RF++ A G D K + E SD + V T S +AAG VN WGFRLRLV G ACSRC W GC+GCFIPPND +R GD+V VDWH++V +E YDA++AMAC+ H S+A E++P+SL++CL+TFTA+E I EGYCSRCKE R + +M +WRLPP+L I LKRFQYT YSRRKLRNLV Sbjct: 1434 LQVFGTPLVCTASAASPPTGRQLYDSLRKRFCRFIK-----DPAADAPPRAAAVTSGETTMDVTAVDAHSLTSPPRALHKSRSMNGSIHRLSEQGEADAKAL-------AEESSDNFNRVTLTCSERLAAGPVNQWGFRLRLVTYDGRACSRCPWLSGCLGCFIPPNDSPAGIRDGDTVAVDWHMTVMRERYDAAQAMACVNHPSVAAALRSESQPMSLQRCLETFTAEETIPEGYCSRCKELRETNMRMGLWRLPPVLVIQLKRFQYTAYSRRKLRNLV 1701
BLAST of mRNA_H-paniculata_contig14694.2801.1 vs. uniprot
Match: A0A2D4BEQ6_PYTIN (USP domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BEQ6_PYTIN) HSP 1 Score: 157 bits (398), Expect = 4.050e-41 Identity = 71/149 (47.65%), Postives = 98/149 (65.77%), Query Frame = 1 Query: 385 VNHWGFRLRLVNSSGTACSRCRWTEGCVGCFIPPN-DELCPVRAGDSVGVDWHISVFKEHYDASEAMACLLHSSLALHKDMEARPLSLEKCLDTFTAQEDIKEGYCSRCKEFRNASKKMDIWRLPPILAIHLKRFQYTQYSRRKLRNLV 828 ++ +GF LRLV S G CSRC W +GC+GC +PP+ P+ A +++ +DW I K+ YD +A H ++A + ++ PL++ +CLD FTA+E I E YC RCK R A+K MD+WRLPP+L I LKRF YTQ SRRKL + V Sbjct: 157 ISRFGFCLRLVTSHGVGCSRCEWLDGCLGCVLPPSPSSRLPLSAEETIAIDWDIRTLKDEYDPIQASKLDTHDAVATNHRLDNMPLNIYRCLDIFTAKEHISEAYCGRCKTHRAATKTMDLWRLPPLLVIQLKRFCYTQTSRRKLHHFV 305
BLAST of mRNA_H-paniculata_contig14694.2801.1 vs. uniprot
Match: K3WLF0_GLOUD (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLF0_GLOUD) HSP 1 Score: 159 bits (403), Expect = 1.330e-40 Identity = 80/164 (48.78%), Postives = 106/164 (64.63%), Query Frame = 1 Query: 349 VRATSMWVAAGD---VNHWGFRLRLVNSSGTACSRCRWTEGCVGCFIPPND-ELCPVRAGDSVGVDWHISVFKEHYDASEAMACLLHSSLALHKDMEARPLSLEKCLDTFTAQEDIKEGYCSRCKEFRNASKKMDIWRLPPILAIHLKRFQYTQYSRRKLRNLV 828 ++A + +A GD V +GF LR+V S GT CSRC W EGC+GC I P+ E + A +++ +DW I KE YD +A +S+ +K + PLS+E C+D FTA+E I+E YC RCK R A+K MD+WRLPP+L I LKRF YTQ SRRKL +LV Sbjct: 556 LKADASALALGDHLPVTKFGFCLRMVTSHGTGCSRCEWLEGCLGCLILPSPHEPLQLTAEETIAIDWDIRTLKEEYDPIQASKLDFDNSVQHNKRQDNMPLSIEHCMDMFTAKERIQEAYCGRCKTLRPATKTMDLWRLPPLLVIQLKRFCYTQVSRRKLHHLV 719
BLAST of mRNA_H-paniculata_contig14694.2801.1 vs. uniprot
Match: W2Q8F7_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2Q8F7_PHYPN) HSP 1 Score: 159 bits (402), Expect = 2.120e-40 Identity = 77/164 (46.95%), Postives = 106/164 (64.63%), Query Frame = 1 Query: 349 VRATSMWVAAGD---VNHWGFRLRLVNSSGTACSRCRWTEGCVGCFIPPNDE-LCPVRAGDSVGVDWHISVFKEHYDASEAMACLLHSSLALHKDMEARPLSLEKCLDTFTAQEDIKEGYCSRCKEFRNASKKMDIWRLPPILAIHLKRFQYTQYSRRKLRNLV 828 VR + +A G+ + +GF LRLV S G CSRC W +GC+GC + P+ E + P+ A ++V +DW I KE YD +A +S+ H+ + +PL+L C++ FTA+E I E YC CK R A+KKMD+WRLPP+L IHLKRF +TQ SRRKL +LV Sbjct: 1314 VRTDTSSLALGEHLTLTKFGFCLRLVTSHGIGCSRCEWLDGCLGCLLLPSSETVIPLAAEETVAIDWDIRTLKEEYDPIQASKMDFDASVQQHQRQDNQPLNLAHCMEIFTAKETIPEAYCGHCKTLRPATKKMDLWRLPPLLVIHLKRFCFTQVSRRKLHHLV 1477
BLAST of mRNA_H-paniculata_contig14694.2801.1 vs. uniprot
Match: A0A418CX72_9STRA (USP domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418CX72_9STRA) HSP 1 Score: 154 bits (388), Expect = 2.760e-40 Identity = 80/171 (46.78%), Postives = 105/171 (61.40%), Query Frame = 1 Query: 340 PSSVRATSM-WVAAG------DVNHWGFRLRLVNSSGTACSRCRWTEGCVGCFIPPN-DELCPVRAGDSVGVDWHISVFKEHYDASEAMACLLHSSLALHKDMEARPLSLEKCLDTFTAQEDIKEGYCSRCKEFRNASKKMDIWRLPPILAIHLKRFQYTQYSRRKLRNLV 828 PS+ RA+ + VA G ++ +GF LRLV G ACSRC W GC GC + + D L V +++ +DW I E YDA+EA +H+S ++A LSL+ CL FTA E + E YCSRCK A+KKMD+WR+PP+L I LKRFQYT SR+KLR+LV Sbjct: 117 PSASRASDVATVALGTHLVWVELTRFGFCLRLVTMDGMACSRCPWLSGCRGCLVSSHPDALLQVCGRETIAIDWDIQTMAEDYDATEASKVQVHASFEKQAKVQAAVLSLQSCLKDFTASEPLDEAYCSRCKALTPAAKKMDLWRVPPLLVIQLKRFQYTATSRKKLRHLV 287
BLAST of mRNA_H-paniculata_contig14694.2801.1 vs. uniprot
Match: F0VYX5_9STRA (Ubiquitinspecific protease putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VYX5_9STRA) HSP 1 Score: 159 bits (401), Expect = 2.910e-40 Identity = 78/175 (44.57%), Postives = 109/175 (62.29%), Query Frame = 1 Query: 331 SDCPSSVRATSMW------VAAGD---VNHWGFRLRLVNSSGTACSRCRWTEGCVGCFIPPNDELCPVRAGDSVGVDWHISVFKEHYDASEAMACLLHSSLALHKDMEARPLSLEKCLDTFTAQEDIKEGYCSRCKEFRNASKKMDIWRLPPILAIHLKRFQYTQYSRRKLRNLV 828 S+ P++ R M+ +A G + +GF LR+V S+G +CSRC W + C+GC I P+ + V A +++ +DW + KE YD EA + +S+ ++ + PL+L++CL+ FTAQE I E YC RCK R A+K MD WRLPPIL IHLKRF YTQ SRRKL + V Sbjct: 1404 SEFPTTTRNEEMFRSDVRTIALGSQLRITKFGFCLRMVTSAGHSCSRCAWLDACLGCLIVPSQDRISVTAEETIAMDWDTASLKEEYDPLEASTMITDASIEHNRQKDQGPLTLDQCLNIFTAQEHINEAYCGRCKALRPANKTMDFWRLPPILVIHLKRFCYTQVSRRKLYHFV 1578
BLAST of mRNA_H-paniculata_contig14694.2801.1 vs. uniprot
Match: A0A484E318_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E318_BRELC) HSP 1 Score: 158 bits (400), Expect = 3.910e-40 Identity = 72/146 (49.32%), Postives = 102/146 (69.86%), Query Frame = 1 Query: 394 WGFRLRLVNSSGTACSRCRWTEGCVGCFIPPNDE-LCPVRAGDSVGVDWHISVFKEHYDASEAMACLLHSSLALHKDMEARPLSLEKCLDTFTAQEDIKEGYCSRCKEFRNASKKMDIWRLPPILAIHLKRFQYTQYSRRKLRNLV 828 +GF LRLV S+G CSRC W +GC+GC + P+ + + P+ A ++V +DW + KE YD+ +A L +S+ H ++ +PL+L C++ FTA+E I E YC RCK R A+KKMD+WRLPP+L IHLKRF +TQ +RRKL +LV Sbjct: 1324 FGFCLRLVTSNGIGCSRCEWLDGCLGCVLLPSYQTMIPLAAEETVAIDWDMRTLKEEYDSIQASKLDLDASVQEHNRLDNQPLNLSHCMEIFTAKETIPEAYCGRCKTLRPATKKMDLWRLPPLLVIHLKRFCFTQVARRKLHHLV 1469
BLAST of mRNA_H-paniculata_contig14694.2801.1 vs. uniprot
Match: A0A833T2V7_PHYIN (Ubiquitin carboxyl-terminal hydrolase domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833T2V7_PHYIN) HSP 1 Score: 158 bits (399), Expect = 5.320e-40 Identity = 73/149 (48.99%), Postives = 99/149 (66.44%), Query Frame = 1 Query: 385 VNHWGFRLRLVNSSGTACSRCRWTEGCVGCFIPPNDE-LCPVRAGDSVGVDWHISVFKEHYDASEAMACLLHSSLALHKDMEARPLSLEKCLDTFTAQEDIKEGYCSRCKEFRNASKKMDIWRLPPILAIHLKRFQYTQYSRRKLRNLV 828 + +GF LRLV S G CSRC W +GC+GC + P+ E + P+ A ++V +DW I KE YD +A +S+ H+ + +PL+L C++ FTA+E I E YC CK R A+KKMD+WRLPP+L IHLKRF +TQ SRRKL +LV Sbjct: 1331 LTKFGFCLRLVTSHGIGCSRCEWLDGCLGCLLLPSSETVIPLAAEETVAIDWDIRTLKEEYDPIQASKMDFDASVQQHQRQDNQPLNLAHCMEIFTAKETIPEAYCGHCKTLRPATKKMDLWRLPPLLVIHLKRFCFTQVSRRKLHHLV 1479 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14694.2801.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14694.2801.1 >prot_H-paniculata_contig14694.2801.1 ID=prot_H-paniculata_contig14694.2801.1|Name=mRNA_H-paniculata_contig14694.2801.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=277bp MQVFGTPLVCRVVPMTGRQLYDKLYRRFHRFLRLKEATTAAGAGGGARVGback to top mRNA from alignment at H-paniculata_contig14694:2351..5745+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14694.2801.1 ID=mRNA_H-paniculata_contig14694.2801.1|Name=mRNA_H-paniculata_contig14694.2801.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3395bp|location=Sequence derived from alignment at H-paniculata_contig14694:2351..5745+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14694:2351..5745+ >mRNA_H-paniculata_contig14694.2801.1 ID=mRNA_H-paniculata_contig14694.2801.1|Name=mRNA_H-paniculata_contig14694.2801.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1662bp|location=Sequence derived from alignment at H-paniculata_contig14694:2351..5745+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |