prot_H-paniculata_contig14642.2778.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14642.2778.1
Unique Nameprot_H-paniculata_contig14642.2778.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length399
Homology
[Close]
BLAST of mRNA_H-paniculata_contig14642.2778.1 vs. uniprot
Match: A0A6H5JRB6_9PHAE (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRB6_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 2.060e-6
Identity = 31/51 (60.78%), Postives = 38/51 (74.51%), Query Frame = 0 
Query:  204 DPGILYLNPATSETTRVPPPELLAQSEEADEAGGYLIFVPSSVFVAAAVGA 254
            D G +YLN AT ET R PP EL+A +++A+ AG YL+FVPS  FVAAA GA
Sbjct:  437 DQGPVYLNTATMETVREPPAELVALADQAESAGDYLVFVPSHRFVAAAAGA 487
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14642.2778.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JRB6_9PHAE2.060e-660.78RanBP2-type domain-containing protein n=1 Tax=Ecto... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14642contigH-paniculata_contig14642:2860..5397 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14642.2778.1mRNA_H-paniculata_contig14642.2778.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14642 2860..5397 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14642.2778.1 ID=prot_H-paniculata_contig14642.2778.1|Name=mRNA_H-paniculata_contig14642.2778.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=399bp
QARKKAVSDAKAEGSSSNKRPRIEEVTVVQPASKSSGGSNGGDNCTPTAV
ERTRGLMAKHEGHGGGGGEGGAVEGIAEGAKCGVVGGVDMQILGVAGKMI
RTHGPWRCAFAMGNGVPAAPPFPRRHANLEQQQQQQHRHPTLTPGPANSI
IVSKDPASISETGNSVGSSTKDSPPLLTSGRIAKQQERTAAAAPAAPAEV
AVLDPGILYLNPATSETTRVPPPELLAQSEEADEAGGYLIFVPSSVFVAA
AVGARGRAGGVAAAATAPPSKFSSSSMCSSQSKLEKVAVAVAESSPGYDG
FGSRMLGLPGAADAAAKAISATCMEASPTPSLGGSRISGKTAAAAASAHC
AAWTPTANNNDTLTVVPALRQGEEAWDRLASADAGDNKGDNSGVSGGGG
back to top