prot_H-paniculata_contig14509.2703.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14509.2703.1
Unique Nameprot_H-paniculata_contig14509.2703.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length102
Homology
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BLAST of mRNA_H-paniculata_contig14509.2703.1 vs. uniprot
Match: A0A6G0WP62_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WP62_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 9.170e-6
Identity = 30/87 (34.48%), Postives = 51/87 (58.62%), Query Frame = 0 
Query:    1 MRPYADASLIVGKDIQAVFAAAQQQGEFQISHILDIGESPDKKGEYVVLVEWVGLGAEESSWEPLAVIHEDVPQYLRRKLKKMRLDA 87
            ++ YA++ L V  D+    A   +   F +  +L +  + D  G + +LV+W+GL  EESSWEP   ++ED+P  LRR++K  + +A
Sbjct: 1204 LKMYAESGLEVTDDLVQHIAYGDEG--FYVEDLLKVRCNDD--GNFELLVKWMGLDREESSWEPAIQLYEDIPVILRRRIKSHQSEA 1286
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BLAST of mRNA_H-paniculata_contig14509.2703.1 vs. uniprot
Match: A0A024TQN1_9STRA (Chromo domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TQN1_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 9.090e-5
Identity = 24/53 (45.28%), Postives = 35/53 (66.04%), Query Frame = 0 
Query:   26 GEFQISHILDIGESPDKKGEYVVLVEWVGLGAEESSWEPLAVIHEDVPQYLRR 78
            G F +  + ++  + +  G Y VLV+W+GL AEESSWEP A + ED+P  LR+
Sbjct:   43 GGFHVERLEEVRVAAN--GRYEVLVKWLGLDAEESSWEPAANLLEDIPVALRK 93
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14509.2703.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6G0WP62_9STRA9.170e-634.48Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A024TQN1_9STRA9.090e-545.28Chromo domain-containing protein n=1 Tax=Aphanomyc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000953Chromo/chromo shadow domainSMARTSM00298chromo_7coord: 27..80
e-value: 8.7E-4
score: 28.6
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 28..91
score: 10.748
NoneNo IPR availableGENE3D2.40.50.40coord: 13..83
e-value: 5.6E-8
score: 34.5
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 22..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14509contigH-paniculata_contig14509:451..756 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14509.2703.1mRNA_H-paniculata_contig14509.2703.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14509 448..756 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14509.2703.1 ID=prot_H-paniculata_contig14509.2703.1|Name=mRNA_H-paniculata_contig14509.2703.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=102bp
MRPYADASLIVGKDIQAVFAAAQQQGEFQISHILDIGESPDKKGEYVVLV
EWVGLGAEESSWEPLAVIHEDVPQYLRRKLKKMRLDASTRATLKAKYNTV
M*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000953Chromo/chromo_shadow_dom
IPR016197Chromo-like_dom_sf