Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 2025 |
| Cds size | 1092 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1445.2679.1 >prot_H-paniculata_contig1445.2679.1 ID=prot_H-paniculata_contig1445.2679.1|Name=mRNA_H-paniculata_contig1445.2679.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=364bp
MPYMRGRPGKPSPIMSGGGYFTSGRKLASTECLVVKTVDNGIQRTLPSYL
ATMKTWHSLASSSRFHFREDRSIVGRATGKSASLSRRATTVPGEVGLVGV
AAGRGGNRPDQQGGGRSVDDGDDLSTASVEKNLRSLQQLWMHRSTSERNT
TFGVATTSSSSRSVASTAASSRTEQSLVENEMMANTNKVESFAHQLTQKG
AVFKERKSRRVHAPPPPYPLSSRNVQLRQLFNMGSLSECSSVSPLVSLSS
QKTSKSVVPKIPTRSSSNNMTSCTSGTSCGGTSVTAFALSGSCRSIGTMP
SHPVVRSRVSPVGLHHSVIPSKVASLIPSFPEAARWRRMNLRAARRSQIN
HVEMNSKARTLGE* back to topmRNA from alignment at H-paniculata_contig1445:19835..21859+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1445.2679.1 ID=mRNA_H-paniculata_contig1445.2679.1|Name=mRNA_H-paniculata_contig1445.2679.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2025bp|location=Sequence derived from alignment at H-paniculata_contig1445:19835..21859+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAAACAATGCCATATATGCGCGGTAGGCCAGGTAAACCTTCACCCATAAT
GAGCGGAGGTGGTTACTTCACGTCAGGCAGAAAGTTGGCATCTACGGAAT
GTTTGGTTGTCAAAACTGTGGACAACGGGATTCAACGGACTTTGCCGAGC
TACCTTGCGACGATGAAGACGTGGCATTCTCTTGCGTCGTCGTCGCGATT
TCATTTTCGAGAGGATCGCTCGATAGTTGGAAGGGCTACTGGAAAATCAG
CTTCGCTGTCACGAAGAGCGACCACCGTGCCTGGTGAGGTGGGCCTGGTA
GGTGTTGCCGCAGGAAGGGGGGGAAACCGTCCAGATCAACAGGGAGGAGG
ACGAAGTGTCGATGATGGTGACGATTTGTCGACAGCGTCCGTCGAGAAGA
ACTTGAGATCTCTGCAGCAGCTATGGATGCATCGTTCTACCAGTGAAAGA
AATACGACCTTTGGCGTTGCGACGACATCCTCGTCTTCTCGTAGCGTGGC
TAGTACCGCGGCGTCCTCTAGGACCGAGCAATCGTTAGTAGAGAACGAGA
TGATGGCGAATACGAATAAGGTTGAATCGTTCGCTCATCAGCTGACACAA
AAAGGAGCTGTGTTCAAGGAGCGCAAGTCCCGACGTGTGCATGCCCCTCC
CCCCCCGTACCCCCTCTCCTCCCGCAATGTTCAGCTTCGCCAACTCTTCA
ACATGGGTAGTCTTTCAGAATGCTCAAGTGTATCACCTCTTGTGTCGCTA
TCCTCACAGAAAACTTCGAAGTCGGTGGTACCAAAAATTCCCACTCGCAG
CAGCAGCAACAACATGACAAGCTGTACTAGCGGCACCAGTTGCGGGGGAA
CAAGCGTCACTGCGTTTGCTCTTAGTGGAAGTTGTCGGTCGATCGGGACA
ATGCCGTCGCACCCTGTTGTGCGTTCTCGTGTCTCGCCCGTGGGCCTCCA
CCACAGCGTCATTCCGTCAAAGGTGGCCAGCCTGATTCCGTCTTTCCCTG
AGGCCGCCCGATGGCGGCGGATGAACTTGCGCGCGGCGCGACGTAGTCAG
ATCAATCACGTTGAAATGAACTCTAAGGCAAGGACTCTTGGAGAGTAGCC
TCAGTAATGACTTACTTGCTGTTTTTCAGAAGACATAGCACTTTGAGTAG
TCGGCAATAGTTTTTCTATGCGTAGGTGGGGACATTTTTGGTAGACTCGT
GTTTAGCTTTGTTGCAAATGGGGCACGTACGTGTTGGTCTGCATATGTAC
AGCAGATGGCACGAAGTTTTGCGGGTTGGGGCGTCTCATCAAAAATGTGA
TAGGATTCTTCGAGAAGTCTCGTCTTCTAATCAACAAACTTTTTTCAAGT
GGTGCGGGTCATATGGATAAGGCCATTGCTGTTGGGGTCACTTGCAATTT
GCTAGCGTTGATGGCTCTTCGTGCTGAAATCTAGGTACATCCTTCAACGG
CAACGCGTGACCAATAACACCTCAAGAATACTACTGTATATAGTAATGCC
ATGGGGTGTACTATGAGTCATTTCTTGAGACCATTTTTTGGGGGTGGAAA
TATTGAAGTGTTGAAATTTGGAAATTTCGAAGAGCCGCGATTGCACGGGG
GATGCTTCGTTCTGATGTAGTGAGTTGATCTTCACTACTCCGATGAAGGT
TTGGTTCGGTGTAGTGTGGTGATGCTGCTATGTGGTTGGCGCATACTAGG
TATATGCTATTGGTTGAGTGAGGGGTTCAGTCTAATCACCATCTTGAACA
AGGAACGCGGAGCTTTGGAATACATACAGGAGTGGGAGGGATGTGTTGGT
GCGGTACTTCTGTAAACCAGATATCGCAACGTAAAAGTCATACAGATTGT
ACAGCAACATACGAAGAAAGTGTAGTCCATCCAGTAAAAATAAGCAGACG
GGGAGCAACGCGTGCGGGCATACGAGGGCGAAATCGCCGTTTATAACACT
CCGTCGTGGTAACCTTGGAAGTAACACGTAAGGGGTGCTGTCAGTGGGGT
GAGTGAGTGGATATACAAAGTAAGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig1445:19835..21859+ >mRNA_H-paniculata_contig1445.2679.1 ID=mRNA_H-paniculata_contig1445.2679.1|Name=mRNA_H-paniculata_contig1445.2679.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2184bp|location=Sequence derived from alignment at H-paniculata_contig1445:19835..21859+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCATATATGCGCGGTAGGCCAGGTAAACCTTCACCCATAATGAGCGG
AGGTGGTTACTTCACGTCAGGCAGAAAGTTGGCATCTACGGAATGTTTGG
TTGTCAAAACTGTGGACAACGGGATTCAACGGACTTTGCCGAGCTACCTT
GCGACGATGAAGACGTGGCATTCTCTTGCGTCGTCGTCGCGATTTCATTT
TCGAGAGGATCGCTCGATAGTTGGAAGGGCTACTGGAAAATCAGCTTCGC
TGTCACGAAGAGCGACCACCGTGCCTGGTGAGGTGGGCCTGGTAGGTGTT
GCCGCAGGAAGGGGGGGAAACCGTCCAGATCAACAGGGAGGAGGACGAAG
TGTCGATGATGGTGACGATTTGTCGACAGCGTCCGTCGAGAAGAACTTGA
GATCTCTGCAGCAGCTATGGATGCATCGTTCTACCAGTGAAAGAAATACG
ACCTTTGGCGTTGCGACGACATCCTCGTCTTCTCGTAGCGTGGCTAGTAC
CGCGGCGTCCTCTAGGACCGAGCAATCGTTAGTAGAGAACGAGATGATGG
CGAATACGAATAAGGTTGAATCGTTCGCTCATCAGCTGACACAAAAAGGA
GCTGTGTTCAAGGAGCGCAAGTCCCGACGTGTGCATGCCCCTCCCCCCCC
GTACCCCCTCTCCTCCCGCAATGTTCAGCTTCGCCAACTCTTCAACATGG
GTAGTCTTTCAGAATGCTCAAGTGTATCACCTCTTGTGTCGCTATCCTCA
CAGAAAACTTCGAAGTCGGTGGTACCAAAAATTCCCACTCGCAGCAGCAG
CAACAACATGACAAGCTGTACTAGCGGCACCAGTTGCGGGGGAACAAGCG
TCACTGCGTTTGCTCTTAGTGGAAGTTGTCGGTCGATCGGGACAATGCCG
TCGCACCCTGTTGTGCGTTCTCGTGTCTCGCCCGTGGGCCTCCACCACAG
CGTCATTCCGTCAAAGGTGGCCAGCCTGATTCCGTCTTTCCCTGAGGCCG
CCCGATGGCGGCGGATGAACTTGCGCGCGGCGCGACGTAGTCAGATCAAT
CACGTTGAAATGAACTCTAAGGCAAGGACTCTTGGAGAGTAGATGCCATA
TATGCGCGGTAGGCCAGGTAAACCTTCACCCATAATGAGCGGAGGTGGTT
ACTTCACGTCAGGCAGAAAGTTGGCATCTACGGAATGTTTGGTTGTCAAA
ACTGTGGACAACGGGATTCAACGGACTTTGCCGAGCTACCTTGCGACGAT
GAAGACGTGGCATTCTCTTGCGTCGTCGTCGCGATTTCATTTTCGAGAGG
ATCGCTCGATAGTTGGAAGGGCTACTGGAAAATCAGCTTCGCTGTCACGA
AGAGCGACCACCGTGCCTGGTGAGGTGGGCCTGGTAGGTGTTGCCGCAGG
AAGGGGGGGAAACCGTCCAGATCAACAGGGAGGAGGACGAAGTGTCGATG
ATGGTGACGATTTGTCGACAGCGTCCGTCGAGAAGAACTTGAGATCTCTG
CAGCAGCTATGGATGCATCGTTCTACCAGTGAAAGAAATACGACCTTTGG
CGTTGCGACGACATCCTCGTCTTCTCGTAGCGTGGCTAGTACCGCGGCGT
CCTCTAGGACCGAGCAATCGTTAGTAGAGAACGAGATGATGGCGAATACG
AATAAGGTTGAATCGTTCGCTCATCAGCTGACACAAAAAGGAGCTGTGTT
CAAGGAGCGCAAGTCCCGACGTGTGCATGCCCCTCCCCCCCCGTACCCCC
TCTCCTCCCGCAATGTTCAGCTTCGCCAACTCTTCAACATGGGTAGTCTT
TCAGAATGCTCAAGTGTATCACCTCTTGTGTCGCTATCCTCACAGAAAAC
TTCGAAGTCGGTGGTACCAAAAATTCCCACTCGCAGCAGCAGCAACAACA
TGACAAGCTGTACTAGCGGCACCAGTTGCGGGGGAACAAGCGTCACTGCG
TTTGCTCTTAGTGGAAGTTGTCGGTCGATCGGGACAATGCCGTCGCACCC
TGTTGTGCGTTCTCGTGTCTCGCCCGTGGGCCTCCACCACAGCGTCATTC
CGTCAAAGGTGGCCAGCCTGATTCCGTCTTTCCCTGAGGCCGCCCGATGG
CGGCGGATGAACTTGCGCGCGGCGCGACGTAGTCAGATCAATCACGTTGA
AATGAACTCTAAGGCAAGGACTCTTGGAGAGTAG back to top
|