mRNA_H-paniculata_contig14448.2674.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig14448.2674.1
Unique NamemRNA_H-paniculata_contig14448.2674.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig14448.2674.1 vs. uniprot
Match: D7G8H1_ECTSI (Similar to L-xylulose reductase (XR) (Dicarbonyl/L-xylulose reductase) n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G8H1_ECTSI)

HSP 1 Score: 458 bits (1178), Expect = 7.270e-156
Identity = 229/274 (83.58%), Postives = 248/274 (90.51%), Query Frame = 1
Query:   64 GKPAPAEPPFPWRSDMLEGKYAIVTGGSAGIGASITECLLKAGAKVAVLARSKAKYDKL---LEEKGWDGSTTTFIPIDLASTDAIHSACVEANEWAGGCADILINNAGVAMIAPILETSVEDWDWTMNVNVRAPFIMAKECARRMIARGKGGKIVSTASTASIFALHDHAPYCTSKAAINGLTKQVMAAEWSKYDIQCNTIGPTIVLTDMGAKAWGKPEKGDPMLDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGITTTGTPCG 876
            G+ APAEP FPWRSDML GK AIVTGGSAGIGA+IT  LL+AGA VAVLARS++KYDKL   LEE+      TTFI IDL+STDAI  A VEANEWAGGCADIL+NNAGVA IAPILE SVEDWDWTMNVNVRAPFIMA+ECA+RMIARG+GGKIVST+STAS+FALHDHA YCTSKAAI GLTK VM+AEWSKYDI CNT+GPTIVLTDMGAKAWG+PEKGDPM+DRTPLGRFAEPWEMAHGV++LVSPSSSQMCGQMLLLDGGITTTGTPCG
Sbjct:    4 GRAAPAEPAFPWRSDMLAGKTAIVTGGSAGIGAAITIALLQAGASVAVLARSRSKYDKLVPLLEERKLPVDKTTFISIDLSSTDAIRQAAVEANEWAGGCADILVNNAGVATIAPILEASVEDWDWTMNVNVRAPFIMAQECAKRMIARGQGGKIVSTSSTASLFALHDHAAYCTSKAAIQGLTK-VMSAEWSKYDINCNTVGPTIVLTDMGAKAWGEPEKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGGITTTGTPCG 276          
BLAST of mRNA_H-paniculata_contig14448.2674.1 vs. uniprot
Match: D7G8H0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8H0_ECTSI)

HSP 1 Score: 420 bits (1080), Expect = 2.450e-141
Identity = 212/260 (81.54%), Postives = 231/260 (88.85%), Query Frame = 1
Query:  109 MLEGKYAIVTGGSAGIGASITECLLKAGAKVAVLARSKAKYDKLL---EEKGWDGSTTTFIPIDLASTDAIHSACVEANEWAGGCADILINNAGVAMIAPILETSVEDWDWTMNVNVRAPFIMAKECARRMIARGKGGKIVSTASTASIFALHDHAPYCTSKAAINGLTKQVMAAEWSKYDIQCNTIGPTIVLTDMGAKAWGKPEKGDPMLDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGITTTGTPCGI 879
            ML  K AIVTGGSAGIGASITE LL+AGA VAVLARS++K+D LL   EEK      T FIPIDL+STD I  A VEAN+WAGGCADIL+NNAGVA IAPILE ++EDWDWTMNVNVRAPFIMA+ECA+RMIARGKGGKIV+T+STAS FALHDHA YCTSKAAINGLTK VM+AEWSK+DI CNTIGPTIVLTDM  KAWGKPEKGDPM+DRTPLGRFAEPWEMAHGV++LVSPSS QMCGQMLLLDGGITTTGTPCG+
Sbjct:    1 MLADKAAIVTGGSAGIGASITEALLRAGASVAVLARSRSKFDGLLPVLEEKKLPVDKTHFIPIDLSSTDDIRRAAVEANDWAGGCADILVNNAGVATIAPILEATIEDWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVNTSSTASRFALHDHAAYCTSKAAINGLTK-VMSAEWSKHDINCNTIGPTIVLTDMCTKAWGKPEKGDPMVDRTPLGRFAEPWEMAHGVVYLVSPSSIQMCGQMLLLDGGITTTGTPCGV 259          
BLAST of mRNA_H-paniculata_contig14448.2674.1 vs. uniprot
Match: A0A6H5JWZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWZ3_9PHAE)

HSP 1 Score: 421 bits (1082), Expect = 2.000e-138
Identity = 223/341 (65.40%), Postives = 246/341 (72.14%), Query Frame = 1
Query:   64 GKPAPAEPPFPWRSDMLEGKYAIVTGGSAGIGASITECLLKAGAKVAVLARSKAKYDKLL---EEKGWDGSTTTFIPIDLASTDAIHSACVEANEWAGGCADILINNAGVAMIAPILETSVEDWDWTMNV------------------------------------------NVRAPFIMAKECARRMIARGKGGKIVSTASTASIFALHDHAPYCTSKAAINGLTK------------------------QVMAAEWSKYDIQCNTIGPTIVLTDMGAKAWGKPEKGDPMLDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGITTTGTPCGI 879
            G+ AP EPPFPWR DML GK AIVTGGSAGIGASITE LL+AGA VAVLARS++K+D LL   EEK      T FIPIDL+STD I  A +EAN+WAGGCADIL+NNAGVA IAPILE ++EDWDWTMNV                                          NVRAPFIMA+ECA+RMI RGKGGKIV+T+STAS FALHDHA YCTSKAAINGLT                         +VM+AEWSK+DI CNTIGPTIVLTDMGAKAWG+PEKGDPM+DRTPLGRFAEPWEMAHGV++LVSPSSSQMCGQMLLLDGGITTTGTPCG+
Sbjct:  133 GRAAPEEPPFPWRCDMLAGKAAIVTGGSAGIGASITEALLRAGASVAVLARSRSKFDGLLPILEEKKLPVDKTHFIPIDLSSTDDIRRAAIEANDWAGGCADILVNNAGVATIAPILEATIEDWDWTMNVRSRRGNPIEIFRTGNNSCEGPFQRQNRNLHVRSLCVGRLVKVNVRAPFIMAQECAKRMIVRGKGGKIVNTSSTASRFALHDHAAYCTSKAAINGLTNVSRHNFLTSPHWLRLCSLHRACGVKVMSAEWSKHDINCNTIGPTIVLTDMGAKAWGEPEKGDPMVDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGGITTTGTPCGV 473          
BLAST of mRNA_H-paniculata_contig14448.2674.1 vs. uniprot
Match: A0A835YTK4_9STRA (Putative short-chain dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTK4_9STRA)

HSP 1 Score: 248 bits (633), Expect = 2.190e-74
Identity = 131/255 (51.37%), Postives = 178/255 (69.80%), Query Frame = 1
Query:   91 FPWRSDMLEGKYAIVTGGSAGIGASITECLLKAGAKVAVLARSKAKYDKLLEEKGWDGSTTTFIPIDLASTDAIHSACVEANEWAGGCADILINNAGVAMIAPILETSVEDWDWTMNVNVRAPFIMAKECARRMIARGKGGKIVSTASTASIFALHDHAPYCTSKAAINGLTKQVMAAEWSKYDIQCNTIGPTIVLTDMGAKAWGKPEKGDPMLDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGIT 855
            FP+R  +L  + A+VTGG+ GIG +IT  L+KAGA  AV+ARSKAK+D +L+   +   +  FI  DL S DA  SA   A  WA G  DIL+NNAGVA++ P+ E  VE WD  M VN RAPF+MA+ CA  MI + + GKI++ +S A    + DHA YC SKAAI+ LT+ VM  EW+K++IQ N+IGPT+V+T+MG + WG    G+PM  RTP+GRFAEP E+A+ V++L S +S+ +CGQ LL++GG+T
Sbjct:    7 FPFRPTLLANRRAVVTGGNDGIGVAITCALVKAGASCAVVARSKAKFDAMLDTHEFLQGSADFIQADLESADATISAGKAAVAWADGHVDILVNNAGVALLGPLTEYGVEAWDKVMAVNARAPFLMAQACAPGMIEQ-RAGKIINISSQAGTIGIADHAAYCASKAAIDALTR-VMTVEWAKHNIQANSIGPTVVMTEMGKRVWGG-AAGEPMRQRTPIGRFAEPDEVANMVVYLCSDASNILCGQTLLMEGGLT 258          
BLAST of mRNA_H-paniculata_contig14448.2674.1 vs. uniprot
Match: M1USM2_CYAM1 (Short chain dehydrogenase/reductase family protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1USM2_CYAM1)

HSP 1 Score: 218 bits (556), Expect = 4.390e-63
Identity = 117/257 (45.53%), Postives = 168/257 (65.37%), Query Frame = 1
Query:   97 WRSDMLEGKYAIVTGGSAGIGASITECLLKAGAK-VAVLARSKAKYDKLLEEKGWD-GSTTTFIPIDLASTDAIHSACVE-ANEWAGGCADILINNAGVAMIAPILETSVEDWDWTMNVNVRAPFIMAKECARR-MIARGKGGKIVSTASTASIFALHDHAPYCTSKAAINGLTKQVMAAEWSKYDIQCNTIGPTIVLTDMGAKAWGKPEKGDPMLDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGIT 855
            +RSD L+GK A++TG S GIGA+I EC L+AG + +A+++R+ +++   L ++    G+   F  ++LA T+A+     +   +W     DIL+NNAG+A++ P+ E S  DWD TM VNVRAPF++++   R  MI RG GGKI+  +S A+   + +HA YC SKAA+N LTK  MA EW  Y IQCN + P+I++TDMG + W  PEK  P+L R P+GRFA P E+A  V+FL SP +  + GQ +  DGG T
Sbjct:    3 FRSDALQGKVAVITGASRGIGAAIAECFLEAGVQGLALISRTPSEFVTQLRKRAESRGTKVGFYSLNLADTEAVERTARQIVQDWEH--VDILVNNAGIALLNPLTELSTVDWDLTMTVNVRAPFLLSRIFVRESMIPRGAGGKIIHISSVAAFGGVPEHAAYCASKAALNSLTK-TMAVEWGPYGIQCNVVCPSIIMTDMGRQVWEDPEKHGPVLARVPIGRFANPPEIARVVLFLASPENCVVNGQCIAPDGGYT 256          
BLAST of mRNA_H-paniculata_contig14448.2674.1 vs. uniprot
Match: A0A7J7ILT2_9RHOD (Short-chain dehydrogenase reductase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ILT2_9RHOD)

HSP 1 Score: 216 bits (550), Expect = 3.300e-62
Identity = 119/258 (46.12%), Postives = 170/258 (65.89%), Query Frame = 1
Query:   97 WRSDMLEGKYAIVTGGSAGIGASITECLLKAGAKVAVL-ARSKAKYDKLLEEKG-WDGSTTTFIPIDLASTDAIHSACVEA--NEWAGGCADILINNAGVAMIAPILETSVEDWDWTMNVNVRAPFIMAKECARR-MIARGKGGKIVSTASTASIFALHDHAPYCTSKAAINGLTKQVMAAEWSKYDIQCNTIGPTIVLTDMGAKAWGKPEKGDPMLDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGIT 855
            +R+D+L+GK A+VTG S GIGA+I +C L+AG    VL +R + ++   L ++    GS   F  ++L  T A+   C E    +W+    DIL+NNAG+A++ P+ E S+ +W+ TM VNVRAPF++A++  R  MI RG GGKI++ +S AS+  + +HA YC+SKAA+N LTK  MA EW  Y IQCN + P+I++TDMG + W  PEK  P+L R P+GRFA P E+A  V+FL SP +  + GQ +  DGG T
Sbjct:    3 FRADVLQGKVAVVTGASRGIGAAIADCFLEAGVSGLVLISREQTEFVHQLRKRAELKGSRVGFYSLELEDTAAVER-CAEQILQDWSQ--VDILVNNAGLALLNPLTELSIGEWERTMAVNVRAPFLLARKFVRESMIPRGVGGKIINISSVASLGGVSEHAAYCSSKAALNSLTK-TMAIEWGPYGIQCNVVCPSIIMTDMGRQVWEDPEKHGPVLARVPIGRFANPPEIARVVLFLASPENCVVNGQCIAPDGGYT 256          
BLAST of mRNA_H-paniculata_contig14448.2674.1 vs. uniprot
Match: A0A6G6X370_9HYPH (Glucose 1-dehydrogenase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A6G6X370_9HYPH)

HSP 1 Score: 211 bits (538), Expect = 1.700e-60
Identity = 118/248 (47.58%), Postives = 161/248 (64.92%), Query Frame = 1
Query:  112 LEGKYAIVTGGSAGIGASITECLLKAGAKVAVLARSKAKYDKLLEEKGWDGSTTTFIPIDLASTDAIHSACVEANEWAGGCADILINNAGVAMIAPILETSVEDWDWTMNVNVRAPFIMAKECARRMIARGKGGKIVSTASTASIFALHDHAPYCTSKAAINGLTKQVMAAEWSKYDIQCNTIGPTIVLTDMGAKAWGKPEKGDPMLDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGIT 855
            L GK A+VTG + GIG  I + L  AGA +A + R +A   ++       G     I  DLAS +    A   A + + G  DIL+NNAG+A+I  +LE S++DWD TM VN+RAPF++AKE A +MIA+ + GKI++ +S A I A+  HA Y  SK  +N LTK VM  EW++++IQ N I PTI+LT MG + WG P KG PMLDRTPLGRF +P E+A  V++L S +S  +CG+ +L+DGG T
Sbjct:   10 LTGKAALVTGATKGIGLDICKVLADAGADIAAVGRDEAGLAEVSRAVEALGRKCVTIAADLASAEGPIEAARTALQ-SFGTIDILVNNAGIALIDTLLEASIDDWDKTMAVNLRAPFLLAKELAPKMIAQ-RAGKIINISSQAGIVAIDGHAAYSASKGGLNMLTK-VMTCEWARHNIQTNAICPTIILTPMGEQVWGDPAKGKPMLDRTPLGRFGKPQEVADLVLYLASHASDLVCGETILIDGGFT 254          
BLAST of mRNA_H-paniculata_contig14448.2674.1 vs. uniprot
Match: A0A3N5HDF8_9HYPH (Glucose 1-dehydrogenase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3N5HDF8_9HYPH)

HSP 1 Score: 210 bits (535), Expect = 4.640e-60
Identity = 115/248 (46.37%), Postives = 158/248 (63.71%), Query Frame = 1
Query:  112 LEGKYAIVTGGSAGIGASITECLLKAGAKVAVLARSKAKYDKLLEEKGWDGSTTTFIPIDLASTDAIHSACVEANEWAGGCADILINNAGVAMIAPILETSVEDWDWTMNVNVRAPFIMAKECARRMIARGKGGKIVSTASTASIFALHDHAPYCTSKAAINGLTKQVMAAEWSKYDIQCNTIGPTIVLTDMGAKAWGKPEKGDPMLDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGIT 855
            LEGK A+VTG + GIG    + L  AGA +A + R KA    +       G     I  D+A+ D   +A  EA + A G  DIL+NNAG+A+I P+L+T V DWD TM VN+RAPF++A+E    MIA+ K GKIV+ +S A +  L  H  YC SK  +N LTK VM  EW++++IQ N++ PT++LT MG K WG+P KGDPML + P  RF +P E+A  +++L S +S  +CGQ +L+DGG T
Sbjct:   10 LEGKRALVTGATKGIGFETCKVLADAGADIAAVGRDKAGLADVAAVVTSIGRRCVTIAADMATVDGPVTAAKEALD-AFGTIDILVNNAGIALIDPLLDTKVADWDMTMAVNLRAPFLLAREIVPGMIAQ-KRGKIVNVSSQAGVVGLEAHGAYCASKGGLNMLTK-VMTVEWARHNIQINSVCPTVILTPMGEKVWGEPAKGDPMLAKIPANRFGKPVEVADMILYLASSASDLVCGQDMLIDGGYT 254          
BLAST of mRNA_H-paniculata_contig14448.2674.1 vs. uniprot
Match: UPI0013D51EFE (SDR family oxidoreductase n=2 Tax=Chelativorans TaxID=449972 RepID=UPI0013D51EFE)

HSP 1 Score: 209 bits (532), Expect = 1.270e-59
Identity = 119/255 (46.67%), Postives = 160/255 (62.75%), Query Frame = 1
Query:   97 WRSDM-LEGKYAIVTGGSAGIGASITECLLKAGAKVAVLARSKAKYDKLLEEKGWDGSTTTFIPIDLASTDAIHSACVEANEWAGGCADILINNAGVAMIAPILETSVEDWDWTMNVNVRAPFIMAKECARRMIARGKGGKIVSTASTASIFALHDHAPYCTSKAAINGLTKQVMAAEWSKYDIQCNTIGPTIVLTDMGAKAWGKPEKGDPMLDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGITT 858
            WR    + GK+A+VTG S GIGA I    L AGA +A + R  +    L EE    G     I  DLA  +    A  EA    G   DIL+N AGVA +API + SVEDW+ TMNVN+RAPF++A+  A  MIA+ +G KIV+ +S   + AL DHA Y +SKAA+N LTK  M AEW++++IQ N I PT+V+T MG + W  PEK  PML +TP GRF EP E+A   ++L SP+S  + G +++++GG T+
Sbjct:    4 WRKRFSITGKHALVTGASKGIGAEIARVFLDAGADIAAVGRDPSGLAALKEEAASAGRDLICIEADLADVEGPVLAAQEALAHFGTI-DILVNCAGVAHVAPIFDLSVEDWNTTMNVNLRAPFLIARTVAPAMIAQRRG-KIVNISSQTGVVALEDHAAYASSKAALNALTKS-MTAEWARHNIQINAICPTVVMTPMGRRVWSPPEKSGPMLAKTPAGRFGEPVEVADCALYLSSPASDLINGALIMIEGGYTS 255          
BLAST of mRNA_H-paniculata_contig14448.2674.1 vs. uniprot
Match: D7FSQ4_ECTSI (Short-chain dehydrogenase/reductase SDR n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSQ4_ECTSI)

HSP 1 Score: 210 bits (535), Expect = 5.600e-59
Identity = 110/264 (41.67%), Postives = 168/264 (63.64%), Query Frame = 1
Query:   76 PAEPPFPWRSDMLEGKYAIVTGGSAGIGASITECLLKAGAKVAVLARSKAKYDKLLEEKGWDGSTTT----FIPIDLASTDAIHSACVEANEWAGGCADILINNAGVAMIAPILETSVEDWDWTMNVNVRAPFIMAKECARRMIARGKGGKIVSTASTASIFALHDHAPYCTSKAAINGLTKQVMAAEWSKYDIQCNTIGPTIVLTDMGAKAWGKPEKGDPMLDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGIT 855
            P EP  P+  D+L GK A+VTGG+ GIG +IT  L+KAGA V V+A ++A Y  ++E  G+D +  T    ++  DL       +   +A +WAGG  DIL+NNAG+ ++   ++ S + +D  + +N RAP ++++ C + MI + K GKIV+  S +++ A   HA YC SKAA++GL   ++  + ++++IQ N I PT+  +DMG K WG P K  PML+RTP+GRF EPWE+A+ V+FL S + +   GQ + +DGG T
Sbjct:   77 PQEPVRPFVPDLLSGKQALVTGGNRGIGEAITVALVKAGAHVCVMAGNEAAYRDMVERHGFDDTEGTGNVYWVQADLRVPSEAIAGAQKAVDWAGGSLDILVNNAGICVLEDFMDISSDTFDEVIAINTRAPLLVSQVCLQGMI-KNKSGKIVNITSQSAVIATKAHASYCASKAAMDGLLHGLVC-DLAQHNIQVNNIAPTVAWSDMGIKTWGDPAKSRPMLERTPIGRFVEPWEIANMVVFLSSDACTMCLGQTICVDGGYT 338          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14448.2674.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8H1_ECTSI7.270e-15683.58Similar to L-xylulose reductase (XR) (Dicarbonyl/L... [more]
D7G8H0_ECTSI2.450e-14181.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWZ3_9PHAE2.000e-13865.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YTK4_9STRA2.190e-7451.37Putative short-chain dehydrogenase n=1 Tax=Tribone... [more]
M1USM2_CYAM14.390e-6345.53Short chain dehydrogenase/reductase family protein... [more]
A0A7J7ILT2_9RHOD3.300e-6246.12Short-chain dehydrogenase reductase n=1 Tax=Cyanid... [more]
A0A6G6X370_9HYPH1.700e-6047.58Glucose 1-dehydrogenase n=3 Tax=Alphaproteobacteri... [more]
A0A3N5HDF8_9HYPH4.640e-6046.37Glucose 1-dehydrogenase n=1 Tax=Hyphomicrobiales b... [more]
UPI0013D51EFE1.270e-5946.67SDR family oxidoreductase n=2 Tax=Chelativorans Ta... [more]
D7FSQ4_ECTSI5.600e-5941.67Short-chain dehydrogenase/reductase SDR n=2 Tax=Ec... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14448contigH-paniculata_contig14448:1639..5981 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score464.5
Seed ortholog evalue3.4e-128
Seed eggNOG ortholog2880.D7G8H1
Preferred nameDCXR
KEGG rclassRC00102,RC00154,RC01491
KEGG koko:K00081,ko:K03331
KEGG ReactionR01904,R02581,R09420
KEGG Pathwayko00040,ko00590,ko00980,ko01100,map00040,map00590,map00980,map01100
KEGG ModuleM00014
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004090,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005874,GO:0005881,GO:0005886,GO:0005902,GO:0005903,GO:0005975,GO:0005996,GO:0005997,GO:0005998,GO:0006006,GO:0006063,GO:0006064,GO:0006082,GO:0006116,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009987,GO:0015630,GO:0016020,GO:0016043,GO:0016052,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0016651,GO:0016655,GO:0019318,GO:0019321,GO:0019323,GO:0019362,GO:0019585,GO:0019637,GO:0019640,GO:0019674,GO:0019752,GO:0022607,GO:0032787,GO:0034641,GO:0042802,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043436,GO:0043621,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0046365,GO:0046395,GO:0046483,GO:0046496,GO:0050038,GO:0051167,GO:0051186,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071944,GO:0072329,GO:0072524,GO:0090407,GO:0098858,GO:0098862,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0120025,GO:1901135,GO:1901137,GO:1901159,GO:1901360,GO:1901564,GO:1901575,GO:1901576
EggNOG free text desc.L-xylulose reductase (NAD ) activity
EggNOG OGsKOG1207@1,KOG1207@2759
Ec32 ortholog descriptionShort-chain dehydrogenase/reductase SDR
Ec32 orthologEc-14_003010.1
EC1.1.1.10,1.1.1.184
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons6
Model size1887
Cds size831
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14448.2674.1prot_H-paniculata_contig14448.2674.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig14448 1696..4982 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929151.8507419-UTR-H-paniculata_contig14448:1638..16951622929151.8507419-UTR-H-paniculata_contig14448:1638..1695Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14448 1639..1695 +
1691480750.5216932-UTR-H-paniculata_contig14448:1638..16951691480750.5216932-UTR-H-paniculata_contig14448:1638..1695Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14448 1639..1695 +
1622929151.9457536-UTR-H-paniculata_contig14448:4982..59811622929151.9457536-UTR-H-paniculata_contig14448:4982..5981Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14448 4983..5981 +
1691480750.6048784-UTR-H-paniculata_contig14448:4982..59811691480750.6048784-UTR-H-paniculata_contig14448:4982..5981Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14448 4983..5981 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929151.8644829-CDS-H-paniculata_contig14448:1695..18181622929151.8644829-CDS-H-paniculata_contig14448:1695..1818Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14448 1696..1818 +
1691480750.5345476-CDS-H-paniculata_contig14448:1695..18181691480750.5345476-CDS-H-paniculata_contig14448:1695..1818Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14448 1696..1818 +
1622929151.8772426-CDS-H-paniculata_contig14448:2187..23831622929151.8772426-CDS-H-paniculata_contig14448:2187..2383Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14448 2188..2383 +
1691480750.5452795-CDS-H-paniculata_contig14448:2187..23831691480750.5452795-CDS-H-paniculata_contig14448:2187..2383Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14448 2188..2383 +
1622929151.889088-CDS-H-paniculata_contig14448:3828..38931622929151.889088-CDS-H-paniculata_contig14448:3828..3893Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14448 3829..3893 +
1691480750.5572598-CDS-H-paniculata_contig14448:3828..38931691480750.5572598-CDS-H-paniculata_contig14448:3828..3893Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14448 3829..3893 +
1622929151.9022326-CDS-H-paniculata_contig14448:4020..41881622929151.9022326-CDS-H-paniculata_contig14448:4020..4188Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14448 4021..4188 +
1691480750.566816-CDS-H-paniculata_contig14448:4020..41881691480750.566816-CDS-H-paniculata_contig14448:4020..4188Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14448 4021..4188 +
1622929151.9155934-CDS-H-paniculata_contig14448:4467..45621622929151.9155934-CDS-H-paniculata_contig14448:4467..4562Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14448 4468..4562 +
1691480750.5836167-CDS-H-paniculata_contig14448:4467..45621691480750.5836167-CDS-H-paniculata_contig14448:4467..4562Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14448 4468..4562 +
1622929151.932172-CDS-H-paniculata_contig14448:4798..49821622929151.932172-CDS-H-paniculata_contig14448:4798..4982Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14448 4799..4982 +
1691480750.5926435-CDS-H-paniculata_contig14448:4798..49821691480750.5926435-CDS-H-paniculata_contig14448:4798..4982Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14448 4799..4982 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig14448.2674.1

>prot_H-paniculata_contig14448.2674.1 ID=prot_H-paniculata_contig14448.2674.1|Name=mRNA_H-paniculata_contig14448.2674.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=277bp
MPGKPAPAEPPFPWRSDMLEGKYAIVTGGSAGIGASITECLLKAGAKVAV
LARSKAKYDKLLEEKGWDGSTTTFIPIDLASTDAIHSACVEANEWAGGCA
DILINNAGVAMIAPILETSVEDWDWTMNVNVRAPFIMAKECARRMIARGK
GGKIVSTASTASIFALHDHAPYCTSKAAINGLTKQVMAAEWSKYDIQCNT
IGPTIVLTDMGAKAWGKPEKGDPMLDRTPLGRFAEPWEMAHGVIFLVSPS
SSQMCGQMLLLDGGITTTGTPCGIQG*
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mRNA from alignment at H-paniculata_contig14448:1639..5981+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig14448.2674.1 ID=mRNA_H-paniculata_contig14448.2674.1|Name=mRNA_H-paniculata_contig14448.2674.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4343bp|location=Sequence derived from alignment at H-paniculata_contig14448:1639..5981+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGTGCACACTCACCGTCTACCTCCTCAGCCGCTTTATCCACTACATTCTC TATCACCATGCCTGGAAAGCCTGCGCCCGCGGAACCTCCGTTCCCTTGGA GGAGTGACATGCTCGAGGGAAAGTATGCGATCGTGACCGGCGGCAGCGCA GGCATCGGCGCATCTATCACGGAGTGCCTGGTGAATGTTTTTTCGTGACG GACAATTGAGTGTTGGTCCTGCTTGTTGGTATATAAGCATTGGAGAAGTT TCAATGAAACCCGTCGTTGAGGTGGTACCGTCGGGAATCGTTCCACTGCG AACTTGTACAGTCCCTATCCTGATCCCAGTTCAGGGCGTCGAATATAGAA GCTCGTACTGTAGACATTTGATCCATTTGTCTTGCTTTCGCGTGCTGGCC CCAGAAGTCCTTCGGCTGTATTATCTTCTGTTTGCTTGACAGGAACAGTA AGGAGTCACGAGTCCCGCTACTCCCAACGCACCTTGACGTCACTGCCATC CGCCCACATACTTCCCTGTTGCGCCGTACTCGTCTCTCGACCATCGCAGC TGAAAGCCGGAGCCAAGGTAGCTGTGCTGGCCAGGAGCAAAGCGAAGTAC GATAAGCTGTTGGAGGAGAAGGGATGGGACGGCTCGACCACGACCTTTAT TCCAATCGATCTTGCTTCCACCGATGCCATACACTCGGCCTGTGTGGAGG CTAATGAGTGGGCAGGCGGTTGCGCGGACATCCTTATTAATAACGGTAAG TTGTTGCGTGCAGAACCTGAGTGTCACCTGGGGTATTTTACTGGACTTAC AATTTTTTGTTATCATTGGTGGCGGTATGTTTTCGGTAGAACGGTGTGGC CTACACTAGTAATGGGCCGCATCTCTCCGACAAGGCAACGACAGAAAAAC GTGTATCTTGTGGTTGACTGCAGTGACTAGCAGACCCCAGCCGATGCATG GTAAACACGCAAAGAAGTTACACCTCGTCATGAGGGTGTTTGCATCCTGG ATCAATGGAAGAGTCCGTCCAGTACAATACTTTCGTGTTGACAATGATGC CGTCCGTAATGCACATGAGTTTTATATCATGGCCTTCCCGCAAGATTTTC TCGAAATATGTTCTCGGTCGGCACGCATTAGAGCACAACTGAAGACTTTT TTGCAGTGCTTCGTCTAAACTGGTGTGTGTGTGTGTGTGATGAAAATATA TCAACGAAATTGCTAGTGAAGTTGATGGTAAATCAGCCCAGCTAAACGTC GCCTGGTGGGAGGCGAGGGGAGCAGGTCGGTGTGGTCTGACTACCCTCGT ATCTAGGATAATCCGTATTGGTTGATCGGCTCGTGTCGGGAAATGTAAGG TGATACACGTGCTCAACTCGGGCCGATGACGGGGCATTTATTGCCGATTC GTCTTGAAAAAGTGCTCTAGTATCAAGCGAGTTATGTGAGGAATTCCTTC TGTTGCACTGTGTTGGTTACTATTGAGTGGTTGAGACGCAGGAACACAAC GGAAGTGTGTGCACATCACGTCCGTTTGGCGGACGGGAAAGTGTTCGTTC AAGACCGGTGTCAGTACTACAGCAGCTTTGTGTGGTCTTGCCGGAGTAAA TACGTCAACTGCATAATGCGCGATATATGCCATGGTTGTTTCGTCGTATA TATATATACGTTATCCGTGTGGTGTTCCGCGTAAGATTCGATAATGTGGT GTGTAGAGAGCCGTCGCAGCGTCATTTCCAGTGAATATCTGTGGTGGAAT ATCGACAAACATGTGATTGACATCTGTATCGAACGCACCGTGTGTAGTAC AGACAAATATAGTCAGGGTCGTCTGTGCGTTGTGGCCGCTATGGGAAACC CTTTAGGCCTTGGGAGACGATGATACACAGTTATTACACGTGTTTCAAAG TTTGCGTTAATACTTCACAAATGGTCGCTTTTGTGAGCAAGAACTGTCAT GAACCGAGCTTTTTTGCGCGAAGCAATATGACCAGATAATATCGTATCAC TGTATCGGACACCTTATTCTGTCGATACGACATGATGTCAACTTGACACC ATCTTTCTGGTATTGGATTACAGACGTCACGAGGTCCTGGATGTATTCTA TAATTTGTGAATTGTGCTGCCATTCGCACCTCATTCTAAATCCTCTTCTC TATTGCTCCCATATGTTATCGCGATTTTCCATGTCTAAAGCCGGCGTGGC GATGATTGCGCCGATACTTGAAACGAGTGTCGAAGACTGGGACTGGACCA TGAATGTGAGTCAGCTGTGCCACTCAAGGAAATTTGTGTCGCAGAGATTT CCTCACATGGTAAAGCGCTCGCACTGTGCTCGAGTTCACCTGACATGAAG CAAATGTTGATCTGTGGTGAAATACCTTCTAGGTGAACGTGAGGGCGCCA TTTATCATGGCGAAGGAATGTGCGAGGAGGATGATAGCGCGCGGGAAGGG TGGGAAGATCGTCAGTACAGCCAGTACAGCTTCCATCTTCGCTCTCCATG ATCACGCTCCCTACTGCACCAGTAAAGCCGCCATCAACGGACTGACCAAG GTGAGTCACCTTTTCACCTGAAGATATAGGTGTTTAAAGCATGTTGTGCG GTTGCTCAAACCGCCCATGAATCTTTCTGTCTTCACTTCGCTAAGGTTCT CGGAATTGTGGAGTCCTCGCTCTTTGATATCGATAATGAAATGCTGACGG TTGATACGAGACAGTGAACACTGGGGACACGGGGATACGTTTAGTAGAAT TTCGCATTTGTCATACAGCCCTTCATTCTGGATGGTACTGACAGTATGCG TGGTGCAATTTCCGGCTGCCCCTCTCGAGCAGGTGATGGCCGCAGAGTGG TCGAAGTATGATATCCAATGCAACACCATCGGCCCTACAATTGTTCTCAC AGATATGGGCGCCAAGGCTTGGGGGTGAGTAACCGTTTCTAACGTGCATA TCAAGCTAACGAACGTTCTATTGAATGTCTTCATGATTAAAAGGGCAACC GTTACATTATTTTGTTGGACTCTTCCATTTACACGTTTGTCGCACCTTGA CTGTTCTCTGGCTACATGATGCTATACATCCTTAATATTTCTCCGTGCTA CTCATGGATACTGCCCTTTTGATTCGTTTATAACGCCCCCTGGTGATTTC GCTTCAACAGGAAGCCGGAGAAGGGAGACCCGATGCTCGACCGCACACCA TTGGGGCGCTTTGCGGAACCCTGGGAGATGGCTCACGGTGTAATCTTCCT TGTCAGTCCTTCGTCGTCGCAAATGTGCGGACAAATGCTTCTCCTTGATG GTGGAATCACCACTACTGGCACCCCGTGCGGCATCCAAGGCTAGAACTAG GGGGTTAACATTTGGAGTGTTGTGCTATCTTATAACTGTAGTTGACCTTG TTTCTTTTCTGGAAAGCCCAGCGTTTTGAAGCAGTAGAAGGAACATTGGG ACATTCTCGTGAGATTTACAGAGTTTCTTTGGTGTATGGTGAGGGTGTCA GCGTCGGTGCTTCACAGCCACAAGGGAAGGGCTATCACCGTTGTGTTTGT TATGTGCGAAGATAGAGGGGGTGAAAAAGCAGGAGTTACCCTTCCGTTTT TATTGTGGTGTCTTGAAGCATGCCTTGTATGGAATATTGGTTGAACTCCT TAAGCTGTTTATGGCATTCCGTATCATATGGAAAACAAACTTGTTACTCT CCAGGGAGGTTTTTGTCGGTAGCAGGTGTACGGTTTTTCGCGTTCATGGG CGGGTCGAATATGATCGGAGCATCACATGACAGTGATTGTCTGGTACTGA AAACGTGGGACAAAGTGCCGCATATCCAGAATTGCAAACAGTAAACTACT GATTATTTCGCCATTTTATCTTTGAATGCGTTGTGCAACTTTTGGTATGA TCTTGTTAATGCTGTGCAGCACATCAAACATGTACCATCTTCAATCTCAT CGATCATCTCGGTTGTCGTGAGGGGCGCTGTGGAAGGTTGGATCAACACC TTCACTATAATTGAAAGTATTTAATTGAGCGATCCATTTTAAAAGGAAAT GGAGTGCGACAATTGTACGAAGTTGATTTAAAAGGAAATGGAGTGCGACA TTCCTATACGATGGTTATGAAACAATGAAATGTAGATCAAGGAAATATAG CAGTGGGATGATAATATGTAAAGCATGTGATACCAAGAAAAAACAAGTTG ATACACTTATTGTGATGAAATCGAATAGAACACGTCGAAAATGGTACCCG AAAAATCCTTAATTTGTTGTGCAGAACATATACGATATTTATACAAAGAC TACCTCCGAAGTAATGTTTGCTATCATGTTCGGAGTAATACAC
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Coding sequence (CDS) from alignment at H-paniculata_contig14448:1639..5981+

>mRNA_H-paniculata_contig14448.2674.1 ID=mRNA_H-paniculata_contig14448.2674.1|Name=mRNA_H-paniculata_contig14448.2674.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1662bp|location=Sequence derived from alignment at H-paniculata_contig14448:1639..5981+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCTGGAAAGCCTGCGCCCGCGGAACCTCCGTTCCCTTGGAGGAGTGA
CATGCTCGAGGGAAAGTATGCGATCGTGACCGGCGGCAGCGCAGGCATCG
GCGCATCTATCACGGAGTGCCTGATGCCTGGAAAGCCTGCGCCCGCGGAA
CCTCCGTTCCCTTGGAGGAGTGACATGCTCGAGGGAAAGTATGCGATCGT
GACCGGCGGCAGCGCAGGCATCGGCGCATCTATCACGGAGTGCCTGCTGA
AAGCCGGAGCCAAGGTAGCTGTGCTGGCCAGGAGCAAAGCGAAGTACGAT
AAGCTGTTGGAGGAGAAGGGATGGGACGGCTCGACCACGACCTTTATTCC
AATCGATCTTGCTTCCACCGATGCCATACACTCGGCCTGTGTGGAGGCTA
ATGAGTGGGCAGGCGGTTGCGCGGACATCCTTATTAATAACGCTGAAAGC
CGGAGCCAAGGTAGCTGTGCTGGCCAGGAGCAAAGCGAAGTACGATAAGC
TGTTGGAGGAGAAGGGATGGGACGGCTCGACCACGACCTTTATTCCAATC
GATCTTGCTTCCACCGATGCCATACACTCGGCCTGTGTGGAGGCTAATGA
GTGGGCAGGCGGTTGCGCGGACATCCTTATTAATAACGCCGGCGTGGCGA
TGATTGCGCCGATACTTGAAACGAGTGTCGAAGACTGGGACTGGACCATG
AATCCGGCGTGGCGATGATTGCGCCGATACTTGAAACGAGTGTCGAAGAC
TGGGACTGGACCATGAATGTGAACGTGAGGGCGCCATTTATCATGGCGAA
GGAATGTGCGAGGAGGATGATAGCGCGCGGGAAGGGTGGGAAGATCGTCA
GTACAGCCAGTACAGCTTCCATCTTCGCTCTCCATGATCACGCTCCCTAC
TGCACCAGTAAAGCCGCCATCAACGGACTGACCAAGGTGAACGTGAGGGC
GCCATTTATCATGGCGAAGGAATGTGCGAGGAGGATGATAGCGCGCGGGA
AGGGTGGGAAGATCGTCAGTACAGCCAGTACAGCTTCCATCTTCGCTCTC
CATGATCACGCTCCCTACTGCACCAGTAAAGCCGCCATCAACGGACTGAC
CAAGCAGGTGATGGCCGCAGAGTGGTCGAAGTATGATATCCAATGCAACA
CCATCGGCCCTACAATTGTTCTCACAGATATGGGCGCCAAGGCTTGGGGC
AGGTGATGGCCGCAGAGTGGTCGAAGTATGATATCCAATGCAACACCATC
GGCCCTACAATTGTTCTCACAGATATGGGCGCCAAGGCTTGGGGGAAGCC
GGAGAAGGGAGACCCGATGCTCGACCGCACACCATTGGGGCGCTTTGCGG
AACCCTGGGAGATGGCTCACGGTGTAATCTTCCTTGTCAGTCCTTCGTCG
TCGCAAATGTGCGGACAAATGCTTCTCCTTGATGGTGGAATCACCACTAC
TGGCACCCCGTGCGGCATCCAAGGCTAGGAAGCCGGAGAAGGGAGACCCG
ATGCTCGACCGCACACCATTGGGGCGCTTTGCGGAACCCTGGGAGATGGC
TCACGGTGTAATCTTCCTTGTCAGTCCTTCGTCGTCGCAAATGTGCGGAC
AAATGCTTCTCCTTGATGGTGGAATCACCACTACTGGCACCCCGTGCGGC
ATCCAAGGCTAG
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