mRNA_H-paniculata_contig14448.2674.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14448.2674.1 vs. uniprot
Match: D7G8H1_ECTSI (Similar to L-xylulose reductase (XR) (Dicarbonyl/L-xylulose reductase) n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G8H1_ECTSI) HSP 1 Score: 458 bits (1178), Expect = 7.270e-156 Identity = 229/274 (83.58%), Postives = 248/274 (90.51%), Query Frame = 1 Query: 64 GKPAPAEPPFPWRSDMLEGKYAIVTGGSAGIGASITECLLKAGAKVAVLARSKAKYDKL---LEEKGWDGSTTTFIPIDLASTDAIHSACVEANEWAGGCADILINNAGVAMIAPILETSVEDWDWTMNVNVRAPFIMAKECARRMIARGKGGKIVSTASTASIFALHDHAPYCTSKAAINGLTKQVMAAEWSKYDIQCNTIGPTIVLTDMGAKAWGKPEKGDPMLDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGITTTGTPCG 876 G+ APAEP FPWRSDML GK AIVTGGSAGIGA+IT LL+AGA VAVLARS++KYDKL LEE+ TTFI IDL+STDAI A VEANEWAGGCADIL+NNAGVA IAPILE SVEDWDWTMNVNVRAPFIMA+ECA+RMIARG+GGKIVST+STAS+FALHDHA YCTSKAAI GLTK VM+AEWSKYDI CNT+GPTIVLTDMGAKAWG+PEKGDPM+DRTPLGRFAEPWEMAHGV++LVSPSSSQMCGQMLLLDGGITTTGTPCG Sbjct: 4 GRAAPAEPAFPWRSDMLAGKTAIVTGGSAGIGAAITIALLQAGASVAVLARSRSKYDKLVPLLEERKLPVDKTTFISIDLSSTDAIRQAAVEANEWAGGCADILVNNAGVATIAPILEASVEDWDWTMNVNVRAPFIMAQECAKRMIARGQGGKIVSTSSTASLFALHDHAAYCTSKAAIQGLTK-VMSAEWSKYDINCNTVGPTIVLTDMGAKAWGEPEKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGGITTTGTPCG 276
BLAST of mRNA_H-paniculata_contig14448.2674.1 vs. uniprot
Match: D7G8H0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8H0_ECTSI) HSP 1 Score: 420 bits (1080), Expect = 2.450e-141 Identity = 212/260 (81.54%), Postives = 231/260 (88.85%), Query Frame = 1 Query: 109 MLEGKYAIVTGGSAGIGASITECLLKAGAKVAVLARSKAKYDKLL---EEKGWDGSTTTFIPIDLASTDAIHSACVEANEWAGGCADILINNAGVAMIAPILETSVEDWDWTMNVNVRAPFIMAKECARRMIARGKGGKIVSTASTASIFALHDHAPYCTSKAAINGLTKQVMAAEWSKYDIQCNTIGPTIVLTDMGAKAWGKPEKGDPMLDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGITTTGTPCGI 879 ML K AIVTGGSAGIGASITE LL+AGA VAVLARS++K+D LL EEK T FIPIDL+STD I A VEAN+WAGGCADIL+NNAGVA IAPILE ++EDWDWTMNVNVRAPFIMA+ECA+RMIARGKGGKIV+T+STAS FALHDHA YCTSKAAINGLTK VM+AEWSK+DI CNTIGPTIVLTDM KAWGKPEKGDPM+DRTPLGRFAEPWEMAHGV++LVSPSS QMCGQMLLLDGGITTTGTPCG+ Sbjct: 1 MLADKAAIVTGGSAGIGASITEALLRAGASVAVLARSRSKFDGLLPVLEEKKLPVDKTHFIPIDLSSTDDIRRAAVEANDWAGGCADILVNNAGVATIAPILEATIEDWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVNTSSTASRFALHDHAAYCTSKAAINGLTK-VMSAEWSKHDINCNTIGPTIVLTDMCTKAWGKPEKGDPMVDRTPLGRFAEPWEMAHGVVYLVSPSSIQMCGQMLLLDGGITTTGTPCGV 259
BLAST of mRNA_H-paniculata_contig14448.2674.1 vs. uniprot
Match: A0A6H5JWZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWZ3_9PHAE) HSP 1 Score: 421 bits (1082), Expect = 2.000e-138 Identity = 223/341 (65.40%), Postives = 246/341 (72.14%), Query Frame = 1 Query: 64 GKPAPAEPPFPWRSDMLEGKYAIVTGGSAGIGASITECLLKAGAKVAVLARSKAKYDKLL---EEKGWDGSTTTFIPIDLASTDAIHSACVEANEWAGGCADILINNAGVAMIAPILETSVEDWDWTMNV------------------------------------------NVRAPFIMAKECARRMIARGKGGKIVSTASTASIFALHDHAPYCTSKAAINGLTK------------------------QVMAAEWSKYDIQCNTIGPTIVLTDMGAKAWGKPEKGDPMLDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGITTTGTPCGI 879 G+ AP EPPFPWR DML GK AIVTGGSAGIGASITE LL+AGA VAVLARS++K+D LL EEK T FIPIDL+STD I A +EAN+WAGGCADIL+NNAGVA IAPILE ++EDWDWTMNV NVRAPFIMA+ECA+RMI RGKGGKIV+T+STAS FALHDHA YCTSKAAINGLT +VM+AEWSK+DI CNTIGPTIVLTDMGAKAWG+PEKGDPM+DRTPLGRFAEPWEMAHGV++LVSPSSSQMCGQMLLLDGGITTTGTPCG+ Sbjct: 133 GRAAPEEPPFPWRCDMLAGKAAIVTGGSAGIGASITEALLRAGASVAVLARSRSKFDGLLPILEEKKLPVDKTHFIPIDLSSTDDIRRAAIEANDWAGGCADILVNNAGVATIAPILEATIEDWDWTMNVRSRRGNPIEIFRTGNNSCEGPFQRQNRNLHVRSLCVGRLVKVNVRAPFIMAQECAKRMIVRGKGGKIVNTSSTASRFALHDHAAYCTSKAAINGLTNVSRHNFLTSPHWLRLCSLHRACGVKVMSAEWSKHDINCNTIGPTIVLTDMGAKAWGEPEKGDPMVDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGGITTTGTPCGV 473
BLAST of mRNA_H-paniculata_contig14448.2674.1 vs. uniprot
Match: A0A835YTK4_9STRA (Putative short-chain dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTK4_9STRA) HSP 1 Score: 248 bits (633), Expect = 2.190e-74 Identity = 131/255 (51.37%), Postives = 178/255 (69.80%), Query Frame = 1 Query: 91 FPWRSDMLEGKYAIVTGGSAGIGASITECLLKAGAKVAVLARSKAKYDKLLEEKGWDGSTTTFIPIDLASTDAIHSACVEANEWAGGCADILINNAGVAMIAPILETSVEDWDWTMNVNVRAPFIMAKECARRMIARGKGGKIVSTASTASIFALHDHAPYCTSKAAINGLTKQVMAAEWSKYDIQCNTIGPTIVLTDMGAKAWGKPEKGDPMLDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGIT 855 FP+R +L + A+VTGG+ GIG +IT L+KAGA AV+ARSKAK+D +L+ + + FI DL S DA SA A WA G DIL+NNAGVA++ P+ E VE WD M VN RAPF+MA+ CA MI + + GKI++ +S A + DHA YC SKAAI+ LT+ VM EW+K++IQ N+IGPT+V+T+MG + WG G+PM RTP+GRFAEP E+A+ V++L S +S+ +CGQ LL++GG+T Sbjct: 7 FPFRPTLLANRRAVVTGGNDGIGVAITCALVKAGASCAVVARSKAKFDAMLDTHEFLQGSADFIQADLESADATISAGKAAVAWADGHVDILVNNAGVALLGPLTEYGVEAWDKVMAVNARAPFLMAQACAPGMIEQ-RAGKIINISSQAGTIGIADHAAYCASKAAIDALTR-VMTVEWAKHNIQANSIGPTVVMTEMGKRVWGG-AAGEPMRQRTPIGRFAEPDEVANMVVYLCSDASNILCGQTLLMEGGLT 258
BLAST of mRNA_H-paniculata_contig14448.2674.1 vs. uniprot
Match: M1USM2_CYAM1 (Short chain dehydrogenase/reductase family protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1USM2_CYAM1) HSP 1 Score: 218 bits (556), Expect = 4.390e-63 Identity = 117/257 (45.53%), Postives = 168/257 (65.37%), Query Frame = 1 Query: 97 WRSDMLEGKYAIVTGGSAGIGASITECLLKAGAK-VAVLARSKAKYDKLLEEKGWD-GSTTTFIPIDLASTDAIHSACVE-ANEWAGGCADILINNAGVAMIAPILETSVEDWDWTMNVNVRAPFIMAKECARR-MIARGKGGKIVSTASTASIFALHDHAPYCTSKAAINGLTKQVMAAEWSKYDIQCNTIGPTIVLTDMGAKAWGKPEKGDPMLDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGIT 855 +RSD L+GK A++TG S GIGA+I EC L+AG + +A+++R+ +++ L ++ G+ F ++LA T+A+ + +W DIL+NNAG+A++ P+ E S DWD TM VNVRAPF++++ R MI RG GGKI+ +S A+ + +HA YC SKAA+N LTK MA EW Y IQCN + P+I++TDMG + W PEK P+L R P+GRFA P E+A V+FL SP + + GQ + DGG T Sbjct: 3 FRSDALQGKVAVITGASRGIGAAIAECFLEAGVQGLALISRTPSEFVTQLRKRAESRGTKVGFYSLNLADTEAVERTARQIVQDWEH--VDILVNNAGIALLNPLTELSTVDWDLTMTVNVRAPFLLSRIFVRESMIPRGAGGKIIHISSVAAFGGVPEHAAYCASKAALNSLTK-TMAVEWGPYGIQCNVVCPSIIMTDMGRQVWEDPEKHGPVLARVPIGRFANPPEIARVVLFLASPENCVVNGQCIAPDGGYT 256
BLAST of mRNA_H-paniculata_contig14448.2674.1 vs. uniprot
Match: A0A7J7ILT2_9RHOD (Short-chain dehydrogenase reductase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ILT2_9RHOD) HSP 1 Score: 216 bits (550), Expect = 3.300e-62 Identity = 119/258 (46.12%), Postives = 170/258 (65.89%), Query Frame = 1 Query: 97 WRSDMLEGKYAIVTGGSAGIGASITECLLKAGAKVAVL-ARSKAKYDKLLEEKG-WDGSTTTFIPIDLASTDAIHSACVEA--NEWAGGCADILINNAGVAMIAPILETSVEDWDWTMNVNVRAPFIMAKECARR-MIARGKGGKIVSTASTASIFALHDHAPYCTSKAAINGLTKQVMAAEWSKYDIQCNTIGPTIVLTDMGAKAWGKPEKGDPMLDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGIT 855 +R+D+L+GK A+VTG S GIGA+I +C L+AG VL +R + ++ L ++ GS F ++L T A+ C E +W+ DIL+NNAG+A++ P+ E S+ +W+ TM VNVRAPF++A++ R MI RG GGKI++ +S AS+ + +HA YC+SKAA+N LTK MA EW Y IQCN + P+I++TDMG + W PEK P+L R P+GRFA P E+A V+FL SP + + GQ + DGG T Sbjct: 3 FRADVLQGKVAVVTGASRGIGAAIADCFLEAGVSGLVLISREQTEFVHQLRKRAELKGSRVGFYSLELEDTAAVER-CAEQILQDWSQ--VDILVNNAGLALLNPLTELSIGEWERTMAVNVRAPFLLARKFVRESMIPRGVGGKIINISSVASLGGVSEHAAYCSSKAALNSLTK-TMAIEWGPYGIQCNVVCPSIIMTDMGRQVWEDPEKHGPVLARVPIGRFANPPEIARVVLFLASPENCVVNGQCIAPDGGYT 256
BLAST of mRNA_H-paniculata_contig14448.2674.1 vs. uniprot
Match: A0A6G6X370_9HYPH (Glucose 1-dehydrogenase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A6G6X370_9HYPH) HSP 1 Score: 211 bits (538), Expect = 1.700e-60 Identity = 118/248 (47.58%), Postives = 161/248 (64.92%), Query Frame = 1 Query: 112 LEGKYAIVTGGSAGIGASITECLLKAGAKVAVLARSKAKYDKLLEEKGWDGSTTTFIPIDLASTDAIHSACVEANEWAGGCADILINNAGVAMIAPILETSVEDWDWTMNVNVRAPFIMAKECARRMIARGKGGKIVSTASTASIFALHDHAPYCTSKAAINGLTKQVMAAEWSKYDIQCNTIGPTIVLTDMGAKAWGKPEKGDPMLDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGIT 855 L GK A+VTG + GIG I + L AGA +A + R +A ++ G I DLAS + A A + + G DIL+NNAG+A+I +LE S++DWD TM VN+RAPF++AKE A +MIA+ + GKI++ +S A I A+ HA Y SK +N LTK VM EW++++IQ N I PTI+LT MG + WG P KG PMLDRTPLGRF +P E+A V++L S +S +CG+ +L+DGG T Sbjct: 10 LTGKAALVTGATKGIGLDICKVLADAGADIAAVGRDEAGLAEVSRAVEALGRKCVTIAADLASAEGPIEAARTALQ-SFGTIDILVNNAGIALIDTLLEASIDDWDKTMAVNLRAPFLLAKELAPKMIAQ-RAGKIINISSQAGIVAIDGHAAYSASKGGLNMLTK-VMTCEWARHNIQTNAICPTIILTPMGEQVWGDPAKGKPMLDRTPLGRFGKPQEVADLVLYLASHASDLVCGETILIDGGFT 254
BLAST of mRNA_H-paniculata_contig14448.2674.1 vs. uniprot
Match: A0A3N5HDF8_9HYPH (Glucose 1-dehydrogenase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3N5HDF8_9HYPH) HSP 1 Score: 210 bits (535), Expect = 4.640e-60 Identity = 115/248 (46.37%), Postives = 158/248 (63.71%), Query Frame = 1 Query: 112 LEGKYAIVTGGSAGIGASITECLLKAGAKVAVLARSKAKYDKLLEEKGWDGSTTTFIPIDLASTDAIHSACVEANEWAGGCADILINNAGVAMIAPILETSVEDWDWTMNVNVRAPFIMAKECARRMIARGKGGKIVSTASTASIFALHDHAPYCTSKAAINGLTKQVMAAEWSKYDIQCNTIGPTIVLTDMGAKAWGKPEKGDPMLDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGIT 855 LEGK A+VTG + GIG + L AGA +A + R KA + G I D+A+ D +A EA + A G DIL+NNAG+A+I P+L+T V DWD TM VN+RAPF++A+E MIA+ K GKIV+ +S A + L H YC SK +N LTK VM EW++++IQ N++ PT++LT MG K WG+P KGDPML + P RF +P E+A +++L S +S +CGQ +L+DGG T Sbjct: 10 LEGKRALVTGATKGIGFETCKVLADAGADIAAVGRDKAGLADVAAVVTSIGRRCVTIAADMATVDGPVTAAKEALD-AFGTIDILVNNAGIALIDPLLDTKVADWDMTMAVNLRAPFLLAREIVPGMIAQ-KRGKIVNVSSQAGVVGLEAHGAYCASKGGLNMLTK-VMTVEWARHNIQINSVCPTVILTPMGEKVWGEPAKGDPMLAKIPANRFGKPVEVADMILYLASSASDLVCGQDMLIDGGYT 254
BLAST of mRNA_H-paniculata_contig14448.2674.1 vs. uniprot
Match: UPI0013D51EFE (SDR family oxidoreductase n=2 Tax=Chelativorans TaxID=449972 RepID=UPI0013D51EFE) HSP 1 Score: 209 bits (532), Expect = 1.270e-59 Identity = 119/255 (46.67%), Postives = 160/255 (62.75%), Query Frame = 1 Query: 97 WRSDM-LEGKYAIVTGGSAGIGASITECLLKAGAKVAVLARSKAKYDKLLEEKGWDGSTTTFIPIDLASTDAIHSACVEANEWAGGCADILINNAGVAMIAPILETSVEDWDWTMNVNVRAPFIMAKECARRMIARGKGGKIVSTASTASIFALHDHAPYCTSKAAINGLTKQVMAAEWSKYDIQCNTIGPTIVLTDMGAKAWGKPEKGDPMLDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGITT 858 WR + GK+A+VTG S GIGA I L AGA +A + R + L EE G I DLA + A EA G DIL+N AGVA +API + SVEDW+ TMNVN+RAPF++A+ A MIA+ +G KIV+ +S + AL DHA Y +SKAA+N LTK M AEW++++IQ N I PT+V+T MG + W PEK PML +TP GRF EP E+A ++L SP+S + G +++++GG T+ Sbjct: 4 WRKRFSITGKHALVTGASKGIGAEIARVFLDAGADIAAVGRDPSGLAALKEEAASAGRDLICIEADLADVEGPVLAAQEALAHFGTI-DILVNCAGVAHVAPIFDLSVEDWNTTMNVNLRAPFLIARTVAPAMIAQRRG-KIVNISSQTGVVALEDHAAYASSKAALNALTKS-MTAEWARHNIQINAICPTVVMTPMGRRVWSPPEKSGPMLAKTPAGRFGEPVEVADCALYLSSPASDLINGALIMIEGGYTS 255
BLAST of mRNA_H-paniculata_contig14448.2674.1 vs. uniprot
Match: D7FSQ4_ECTSI (Short-chain dehydrogenase/reductase SDR n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSQ4_ECTSI) HSP 1 Score: 210 bits (535), Expect = 5.600e-59 Identity = 110/264 (41.67%), Postives = 168/264 (63.64%), Query Frame = 1 Query: 76 PAEPPFPWRSDMLEGKYAIVTGGSAGIGASITECLLKAGAKVAVLARSKAKYDKLLEEKGWDGSTTT----FIPIDLASTDAIHSACVEANEWAGGCADILINNAGVAMIAPILETSVEDWDWTMNVNVRAPFIMAKECARRMIARGKGGKIVSTASTASIFALHDHAPYCTSKAAINGLTKQVMAAEWSKYDIQCNTIGPTIVLTDMGAKAWGKPEKGDPMLDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGIT 855 P EP P+ D+L GK A+VTGG+ GIG +IT L+KAGA V V+A ++A Y ++E G+D + T ++ DL + +A +WAGG DIL+NNAG+ ++ ++ S + +D + +N RAP ++++ C + MI + K GKIV+ S +++ A HA YC SKAA++GL ++ + ++++IQ N I PT+ +DMG K WG P K PML+RTP+GRF EPWE+A+ V+FL S + + GQ + +DGG T Sbjct: 77 PQEPVRPFVPDLLSGKQALVTGGNRGIGEAITVALVKAGAHVCVMAGNEAAYRDMVERHGFDDTEGTGNVYWVQADLRVPSEAIAGAQKAVDWAGGSLDILVNNAGICVLEDFMDISSDTFDEVIAINTRAPLLVSQVCLQGMI-KNKSGKIVNITSQSAVIATKAHASYCASKAAMDGLLHGLVC-DLAQHNIQVNNIAPTVAWSDMGIKTWGDPAKSRPMLERTPIGRFVEPWEIANMVVFLSSDACTMCLGQTICVDGGYT 338 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14448.2674.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14448.2674.1 >prot_H-paniculata_contig14448.2674.1 ID=prot_H-paniculata_contig14448.2674.1|Name=mRNA_H-paniculata_contig14448.2674.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=277bp MPGKPAPAEPPFPWRSDMLEGKYAIVTGGSAGIGASITECLLKAGAKVAVback to top mRNA from alignment at H-paniculata_contig14448:1639..5981+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14448.2674.1 ID=mRNA_H-paniculata_contig14448.2674.1|Name=mRNA_H-paniculata_contig14448.2674.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4343bp|location=Sequence derived from alignment at H-paniculata_contig14448:1639..5981+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14448:1639..5981+ >mRNA_H-paniculata_contig14448.2674.1 ID=mRNA_H-paniculata_contig14448.2674.1|Name=mRNA_H-paniculata_contig14448.2674.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1662bp|location=Sequence derived from alignment at H-paniculata_contig14448:1639..5981+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |