mRNA_H-paniculata_contig14436.2664.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14436.2664.1 vs. uniprot
Match: A0A6H5JIN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIN4_9PHAE) HSP 1 Score: 145 bits (365), Expect = 2.320e-43 Identity = 73/82 (89.02%), Postives = 79/82 (96.34%), Query Frame = 1 Query: 10 FDERILVPEATDQWLWIVIVGAFGAFFAAFGIGANNVANAFATSVGAKALTIRQAVVLAGIFEFLGAVFLGSHVTKTIRKGI 255 + ERILVPE TDQ+LWI+IVGAFGAFFAAFGIGAN+VANAFATSVGAKALTI+QAV+LAGIFEFLGAVFLGSHVTKTIR GI Sbjct: 6 YAERILVPETTDQFLWILIVGAFGAFFAAFGIGANDVANAFATSVGAKALTIKQAVILAGIFEFLGAVFLGSHVTKTIRSGI 87
BLAST of mRNA_H-paniculata_contig14436.2664.1 vs. uniprot
Match: D7G5U7_ECTSI (High affinity phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5U7_ECTSI) HSP 1 Score: 144 bits (363), Expect = 5.270e-42 Identity = 73/80 (91.25%), Postives = 78/80 (97.50%), Query Frame = 1 Query: 16 ERILVPEATDQWLWIVIVGAFGAFFAAFGIGANNVANAFATSVGAKALTIRQAVVLAGIFEFLGAVFLGSHVTKTIRKGI 255 ERIL PEATDQ+LWI+IV AFGAFFAAFGIGAN+VANAFATSVGAKALTI+QAVVLAG+FEFLGAVFLGSHVTKTIRKGI Sbjct: 33 ERILAPEATDQFLWILIVAAFGAFFAAFGIGANDVANAFATSVGAKALTIKQAVVLAGVFEFLGAVFLGSHVTKTIRKGI 112
BLAST of mRNA_H-paniculata_contig14436.2664.1 vs. uniprot
Match: A0A6H5JNE7_9PHAE (Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNE7_9PHAE) HSP 1 Score: 145 bits (365), Expect = 2.340e-39 Identity = 74/86 (86.05%), Postives = 79/86 (91.86%), Query Frame = 1 Query: 1 MSG-FDERILVPEATDQWLWIVIVGAFGAFFAAFGIGANNVANAFATSVGAKALTIRQAVVLAGIFEFLGAVFLGSHVTKTIRKGI 255 M G F+ERIL PE TDQWLWI+IV +FGAFFAAFGIGAN+VANAFATSVGAKALTI+QAVVLA IFEF GAVFLGSHVTKTIRKGI Sbjct: 1 MDGVFEERILAPETTDQWLWILIVASFGAFFAAFGIGANDVANAFATSVGAKALTIKQAVVLAAIFEFAGAVFLGSHVTKTIRKGI 86
BLAST of mRNA_H-paniculata_contig14436.2664.1 vs. uniprot
Match: D7G0K9_ECTSI (Phosphate transporter n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K9_ECTSI) HSP 1 Score: 143 bits (361), Expect = 8.960e-39 Identity = 73/82 (89.02%), Postives = 77/82 (93.90%), Query Frame = 1 Query: 10 FDERILVPEATDQWLWIVIVGAFGAFFAAFGIGANNVANAFATSVGAKALTIRQAVVLAGIFEFLGAVFLGSHVTKTIRKGI 255 + ERIL PE TD +LWIVIVGAFGAFFAAFGIGAN+VANAFATSVGAKALTI+QAVVLAGIFEFLGAVFLGSHVTKTIR GI Sbjct: 6 YTERILAPETTDHFLWIVIVGAFGAFFAAFGIGANDVANAFATSVGAKALTIKQAVVLAGIFEFLGAVFLGSHVTKTIRSGI 87
BLAST of mRNA_H-paniculata_contig14436.2664.1 vs. uniprot
Match: D8LJQ3_ECTSI (Pho4 high affinity phosphate transporter, probable (IC) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ3_ECTSI) HSP 1 Score: 124 bits (312), Expect = 1.620e-35 Identity = 58/84 (69.05%), Postives = 73/84 (86.90%), Query Frame = 1 Query: 4 SGFDERILVPEATDQWLWIVIVGAFGAFFAAFGIGANNVANAFATSVGAKALTIRQAVVLAGIFEFLGAVFLGSHVTKTIRKGI 255 R+L PEA+DQWLWIV+VGAFG+F AAFGIGAN+VANAF+TSVGA+A+T++QA+VLAG+FEFLGA+ LG+ VTK IR+ I Sbjct: 3 EALQPRMLAPEASDQWLWIVVVGAFGSFLAAFGIGANDVANAFSTSVGARAVTLKQAIVLAGVFEFLGALLLGAPVTKAIRENI 86
BLAST of mRNA_H-paniculata_contig14436.2664.1 vs. uniprot
Match: D7FZJ7_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZJ7_ECTSI) HSP 1 Score: 133 bits (335), Expect = 4.930e-35 Identity = 69/84 (82.14%), Postives = 76/84 (90.48%), Query Frame = 1 Query: 4 SGFD-ERILVPEATDQWLWIVIVGAFGAFFAAFGIGANNVANAFATSVGAKALTIRQAVVLAGIFEFLGAVFLGSHVTKTIRKG 252 SG + ERIL P+ T+ +LWI+IVG FGAFFAAFGIGAN+VANAFATSVGAKALT+RQAVVLAGIFEFLGAVFLGSHVT TIR G Sbjct: 3 SGLNAERILAPDTTNGFLWILIVGTFGAFFAAFGIGANDVANAFATSVGAKALTLRQAVVLAGIFEFLGAVFLGSHVTSTIRSG 86
BLAST of mRNA_H-paniculata_contig14436.2664.1 vs. uniprot
Match: D7FWT9_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT9_ECTSI) HSP 1 Score: 128 bits (321), Expect = 5.430e-33 Identity = 64/81 (79.01%), Postives = 72/81 (88.89%), Query Frame = 1 Query: 13 DERILVPEATDQWLWIVIVGAFGAFFAAFGIGANNVANAFATSVGAKALTIRQAVVLAGIFEFLGAVFLGSHVTKTIRKGI 255 DERIL P T ++LWIVIV + GA FAAFGIGAN++ANAFATSVGA+ALTI+QAVVLAG+FEFLGAVFLGSHV KTIR GI Sbjct: 7 DERILAPAVTSEFLWIVIVSSIGAVFAAFGIGANDLANAFATSVGARALTIKQAVVLAGVFEFLGAVFLGSHVAKTIRSGI 87
BLAST of mRNA_H-paniculata_contig14436.2664.1 vs. uniprot
Match: A0A6U1NDP7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NDP7_9STRA) HSP 1 Score: 108 bits (270), Expect = 5.070e-28 Identity = 54/71 (76.06%), Postives = 61/71 (85.92%), Query Frame = 1 Query: 43 DQWLWIVIVGAFGAFFAAFGIGANNVANAFATSVGAKALTIRQAVVLAGIFEFLGAVFLGSHVTKTIRKGI 255 D +LWIVIVG F A F A+GIGAN+VANAF+TSVGAK LT++QAV+L GIFEFLGA GSHVTKTIRKGI Sbjct: 7 DDYLWIVIVGGFLAVFTAYGIGANDVANAFSTSVGAKTLTLKQAVILGGIFEFLGAFLFGSHVTKTIRKGI 77
BLAST of mRNA_H-paniculata_contig14436.2664.1 vs. uniprot
Match: A0A7S3Y1S0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1S0_HETAK) HSP 1 Score: 104 bits (260), Expect = 2.630e-27 Identity = 57/85 (67.06%), Postives = 69/85 (81.18%), Query Frame = 1 Query: 10 FDERILVPEATDQ---WLWIVIVGAFGAFFAAFGIGANNVANAFATSVGAKALTIRQAVVLAGIFEFLGAVFLGSHVTKTIRKGI 255 +D R+L EAT + +LWIV+VG F A F ++GIGAN+VANAFATSVGAK L+++ AV+LA IFEF GAV LGSHVTKTIRKGI Sbjct: 3 YDARML--EATYEPKDYLWIVVVGGFLAVFCSYGIGANDVANAFATSVGAKTLSVKHAVILAAIFEFGGAVLLGSHVTKTIRKGI 85
BLAST of mRNA_H-paniculata_contig14436.2664.1 vs. uniprot
Match: A0A7S2V1L4_9STRA (Phosphate transporter n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1L4_9STRA) HSP 1 Score: 108 bits (270), Expect = 7.380e-26 Identity = 54/71 (76.06%), Postives = 61/71 (85.92%), Query Frame = 1 Query: 43 DQWLWIVIVGAFGAFFAAFGIGANNVANAFATSVGAKALTIRQAVVLAGIFEFLGAVFLGSHVTKTIRKGI 255 D +LWIVIVG F A F A+GIGAN+VANAF+TSVGAK LT++QAV+L GIFEFLGA GSHVTKTIRKGI Sbjct: 7 DDYLWIVIVGGFLAVFTAYGIGANDVANAFSTSVGAKTLTLKQAVILGGIFEFLGAFLFGSHVTKTIRKGI 77 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14436.2664.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14436.2664.1 >prot_H-paniculata_contig14436.2664.1 ID=prot_H-paniculata_contig14436.2664.1|Name=mRNA_H-paniculata_contig14436.2664.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=85bp MSGFDERILVPEATDQWLWIVIVGAFGAFFAAFGIGANNVANAFATSVGAback to top mRNA from alignment at H-paniculata_contig14436:1165..1419+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14436.2664.1 ID=mRNA_H-paniculata_contig14436.2664.1|Name=mRNA_H-paniculata_contig14436.2664.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=255bp|location=Sequence derived from alignment at H-paniculata_contig14436:1165..1419+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14436:1165..1419+ >mRNA_H-paniculata_contig14436.2664.1 ID=mRNA_H-paniculata_contig14436.2664.1|Name=mRNA_H-paniculata_contig14436.2664.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=510bp|location=Sequence derived from alignment at H-paniculata_contig14436:1165..1419+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |