prot_H-paniculata_contig1439.2636.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1439.2636.1
Unique Nameprot_H-paniculata_contig1439.2636.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length775
Homology
BLAST of mRNA_H-paniculata_contig1439.2636.1 vs. uniprot
Match: D7FKW0_ECTSI (ATG13 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKW0_ECTSI)

HSP 1 Score: 238 bits (608), Expect = 9.680e-65
Identity = 265/779 (34.02%), Postives = 336/779 (43.13%), Query Frame = 0
Query:    3 KRANILLRTLYSFVRMVPAYQVHKRIQRDFDSRERSPGVERDDMGFCLYPILDRGGGGSGLSFSTVPSNSDDGGCRIDRKMSTGCYSFKPLEAPHGSMRITVTYRRGVDPKARRRRENLGCPTSTMAPNMTTSIIQDYVPDKYSNDP--TRQIGTESDSKLGGEVDGDKQIEFLPKFASMADLSTIRKPQVSEHEHGTNAMSGLGAALLHHNVDGRSGVQGRVQAYSLLGYRPGPDKGTDSFGETDLALGPGLLHWPSPEQGHGYADSRVYKLKGQGLAPFLTPGPHRHKLVPSGNQGHVGEMEPLDLGPTAGVRSRD---------RQRPADLLLLSSERSRCRAHAEEDRHNVNSREPQYVLSGGDSIGAAQSESRSLDTHGSLEEYVGQRGRVQSLHRGCKLVPDVPPDTILPTTGLEQQTNAPLRSVYRRNSISEEPMGVATVLPHEQALLSVMKDNSQQSKREGATTGATSGPTGSTPPFSYYEDVSTARRAEANADEPPFELGHPLVSFSPPFDASPLTPGVHDQLPRAEGGELGDASPIRAVQAQSGTEVRCHGALTSFALAASFSPALLETLPESPFSSSVGTERSIHPAVSATATATSSRFSTPFALPILEGRSVSAPGNADQRTATAMQVIDSAEGLPFAV-YGDGGMREDIPDFIPEDSGVVSTECGSNITRSVPPSTLFALYSATSSKSMFLAKEGPPPELRTPAPCSSFDDGTTPVENGKEIDPTTAYSPSGRRLELM-ELAQETEKTVRSLEEELDGFRQFHEEL 768
            KR+ ILLRTLYS VR++PAY VHKRIQ    SR+ S    RDD GF LYP+ D G  GSGL FS   S  +D   R  RK ST CY+FKPL+APHGS+++   YRRGVD KA +  +     T T AP+MTTS+I DYV D+Y  +   +R   TE        V+ D      PK  S  +                               DG S   G V AY       G   G     E        ++HWPSPE GHGYA+ R +    QG APFLTPGPHR +  P G   H   MEPL+LGP A + +R          RQ   DL+ +S++                       LSG     + ++ES  +D+H S        G +++   G                G+  +  A +R  YRRNSISE     +   P       +   +   +  E             TPPFSY  + +     E N       LG PLVSFSPPF+A  +    HD          G  +P+                           P LLE LPESPF+  +  E +  P V  TA A+SSR   PF LP L+  S       +   A     ID  E LPFA    D G+   +      DS V   E G  +  S  PSTL+AL SA SSKS+FLA            P S + + T  V   +E D     SP          L QE    VRSLEE+L+GFR F +E+
Sbjct:  112 KRSIILLRTLYSLVRLLPAYSVHKRIQ----SRDVSLADSRDDTGFSLYPLRDGGSCGSGLDFSA--SGGEDHAGRSGRK-STSCYTFKPLKAPHGSVKVICHYRRGVDSKAYQHGQTN---TVTAAPDMTTSLIPDYVTDEYERNAAASRMPATE--------VNHD-----WPKLPSTPE-------------------------------DGASVPDGAVDAY-------GQHAGNKVSKENTS-----MMHWPSPELGHGYAEKRTHIGPRQGPAPFLTPGPHRGR--PLGR--HDVMMEPLELGPNAEIHARGPPHFPAPPVRQENEDLIRVSAQ----------------------TLSGA----SGRTESNHVDSHCS-------NGMIRTAEGG--------------EDGVADRGRALMRP-YRRNSISE-----SLSTPSGSGGSRITAGHRHSTAIEY------------TPPFSY--NTTGPDLGERN-----IALGQPLVSFSPPFNAVHVGQRGHDSTFSIRVHSSGPRAPV---------------------------PTLLEVLPESPFA--LRKEGTQPPGVPGTAVASSSR---PF-LPRLDCSSQ------EPTFAATSAGIDRTE-LPFAAELQDDGVSASV------DSSVCGVEGG--LDSSAAPSTLYALCSAASSKSIFLAD-----------PSSEYAEQTA-VGFLQERDSNDVPSPGAEYTSTAGSLPQEV--IVRSLEEDLEGFRLFQQEV 686          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1439.2636.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKW0_ECTSI9.680e-6534.02ATG13 domain-containing protein n=1 Tax=Ectocarpus... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 737..764
IPR018731Autophagy-related protein 13, N-terminalPFAMPF10033ATG13coord: 2..109
e-value: 1.1E-7
score: 31.9
IPR036570HORMA domain superfamilyGENE3D3.30.900.10coord: 1..112
e-value: 2.9E-9
score: 38.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1439contigH-paniculata_contig1439:429..11462 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1439.2636.1mRNA_H-paniculata_contig1439.2636.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1439 380..11725 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1439.2636.1 ID=prot_H-paniculata_contig1439.2636.1|Name=mRNA_H-paniculata_contig1439.2636.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=775bp
MNKRANILLRTLYSFVRMVPAYQVHKRIQRDFDSRERSPGVERDDMGFCL
YPILDRGGGGSGLSFSTVPSNSDDGGCRIDRKMSTGCYSFKPLEAPHGSM
RITVTYRRGVDPKARRRRENLGCPTSTMAPNMTTSIIQDYVPDKYSNDPT
RQIGTESDSKLGGEVDGDKQIEFLPKFASMADLSTIRKPQVSEHEHGTNA
MSGLGAALLHHNVDGRSGVQGRVQAYSLLGYRPGPDKGTDSFGETDLALG
PGLLHWPSPEQGHGYADSRVYKLKGQGLAPFLTPGPHRHKLVPSGNQGHV
GEMEPLDLGPTAGVRSRDRQRPADLLLLSSERSRCRAHAEEDRHNVNSRE
PQYVLSGGDSIGAAQSESRSLDTHGSLEEYVGQRGRVQSLHRGCKLVPDV
PPDTILPTTGLEQQTNAPLRSVYRRNSISEEPMGVATVLPHEQALLSVMK
DNSQQSKREGATTGATSGPTGSTPPFSYYEDVSTARRAEANADEPPFELG
HPLVSFSPPFDASPLTPGVHDQLPRAEGGELGDASPIRAVQAQSGTEVRC
HGALTSFALAASFSPALLETLPESPFSSSVGTERSIHPAVSATATATSSR
FSTPFALPILEGRSVSAPGNADQRTATAMQVIDSAEGLPFAVYGDGGMRE
DIPDFIPEDSGVVSTECGSNITRSVPPSTLFALYSATSSKSMFLAKEGPP
PELRTPAPCSSFDDGTTPVENGKEIDPTTAYSPSGRRLELMELAQETEKT
VRSLEEELDGFRQFHEELGSVTRP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018731Atg13_N
IPR036570HORMA_dom_sf