|
Homology
BLAST of mRNA_H-paniculata_contig1439.2636.1 vs. uniprot
Match: D7FKW0_ECTSI (ATG13 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKW0_ECTSI) HSP 1 Score: 252 bits (644), Expect = 4.570e-69 Identity = 274/797 (34.38%), Postives = 346/797 (43.41%), Query Frame = 2
Query: 2 YEAHDSIGSKSTQRRHMNKRANILLRTLYSFVRMVPAYQVHKRIQRDFDSRERSPGVERDDMGFCLYPILDRGGGGSGLSFSTVPSNSDDGGCRIDRKMSTGCYSFKPLEAPHGSMRITVTYRRGVDPKARRRRENLGCPTSTMAPNMTTSIIQDYVPDKYSNDP--TRQIGTESDSKLGGEVDGDKQIEFLPKFASMADLSTIRKPQVSEHEHGTNAMSGLGAALLHHNVDGRSGVQGRVQAYSLLGYRPGPDKGTDSFGETDLALGPGLLHWPSPEQGHGYADSRVYKLKGQGLAPFLTPGPHRHKLVPSGNQGHVGEMEPLDLGPTAGVRSRD---------RQRPADLLLLSSERSRCRAHAEEDRHNVNSREPQYVLSGGDSIGAAQSESRSLDTHGSLEEYVGQRGRVQSLHRGCKLVPDVPPDTILPTTGLEQQTNAPLRSVYRRNSISEEPMGVATVLPHEQALLSVMKDNSQQSKREGATTGATSGPTGSTPPFSYYEDVSTARRAEANADEPPFELGHPLVSFSPPFDASPLTPGVHDQLPRAEGGELGDASPIRAVQAQSGTEVRCHGALTSFALAASFSPALLETLPESPFSSSVGTERSIHPAVSATATATSSRFSTPFALPILEGRSVSAPGNADQRTATAMQVIDSAEGLPFAV-YGDGGMREDIPDFIPEDSGVVSTECGSNITRSVPPSTLFALYSATSSKSMFLAKEGPPPELRTPAPCSSFDDGTTPVENGKEIDPTTAYSPSGRRLELM-ELAQETEKTVRSLEEELDGFRQFHEEL 2353
YEA D+ KS Q RH KR+ ILLRTLYS VR++PAY VHKRIQ SR+ S RDD GF LYP+ D G GSGL FS S +D R RK ST CY+FKPL+APHGS+++ YRRGVD KA + + T T AP+MTTS+I DYV D+Y + +R TE V+ D PK S + DG S G V AY G G E ++HWPSPE GHGYA+ R + QG APFLTPGPHR + P G H MEPL+LGP A + +R RQ DL+ +S++ LSG + ++ES +D+H S G +++ G G+ + A +R YRRNSISE + P + + + E TPPFSY + + E N LG PLVSFSPPF+A + HD G +P+ P LLE LPESPF+ + E + P V TA A+SSR PF LP L+ S + A ID E LPFA D G+ + DS V E G + S PSTL+AL SA SSKS+FLA P S + + T V +E D SP L QE VRSLEE+L+GFR F +E+
Sbjct: 94 YEAQDAAEGKSAQLRHFFKRSIILLRTLYSLVRLLPAYSVHKRIQ----SRDVSLADSRDDTGFSLYPLRDGGSCGSGLDFSA--SGGEDHAGRSGRK-STSCYTFKPLKAPHGSVKVICHYRRGVDSKAYQHGQTN---TVTAAPDMTTSLIPDYVTDEYERNAAASRMPATE--------VNHD-----WPKLPSTPE-------------------------------DGASVPDGAVDAY-------GQHAGNKVSKENTS-----MMHWPSPELGHGYAEKRTHIGPRQGPAPFLTPGPHRGR--PLGR--HDVMMEPLELGPNAEIHARGPPHFPAPPVRQENEDLIRVSAQ----------------------TLSGA----SGRTESNHVDSHCS-------NGMIRTAEGG--------------EDGVADRGRALMRP-YRRNSISE-----SLSTPSGSGGSRITAGHRHSTAIEY------------TPPFSY--NTTGPDLGERN-----IALGQPLVSFSPPFNAVHVGQRGHDSTFSIRVHSSGPRAPV---------------------------PTLLEVLPESPFA--LRKEGTQPPGVPGTAVASSSR---PF-LPRLDCSSQ------EPTFAATSAGIDRTE-LPFAAELQDDGVSASV------DSSVCGVEGG--LDSSAAPSTLYALCSAASSKSIFLAD-----------PSSEYAEQTA-VGFLQERDSNDVPSPGAEYTSTAGSLPQEV--IVRSLEEDLEGFRLFQQEV 686
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 243.0 |
Seed ortholog evalue | 4.5e-61 |
Seed eggNOG ortholog | 2880.D7FKW0 |
Preferred name | ATG13 |
KEGG ko | ko:K08331 |
KEGG Pathway | ko04136,ko04138,ko04140,ko04211,map04136,map04138,map04140,map04211 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000045,GO:0000407,GO:0000422,GO:0001932,GO:0001934,GO:0002790,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005776,GO:0005829,GO:0006810,GO:0006914,GO:0006996,GO:0007005,GO:0007033,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009306,GO:0009893,GO:0009987,GO:0010562,GO:0010604,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016236,GO:0016237,GO:0019207,GO:0019220,GO:0019222,GO:0019887,GO:0019898,GO:0022411,GO:0022607,GO:0030234,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0032147,GO:0032258,GO:0032268,GO:0032270,GO:0032940,GO:0032991,GO:0033036,GO:0033365,GO:0033674,GO:0034497,GO:0034613,GO:0034727,GO:0042325,GO:0042327,GO:0042886,GO:0043085,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043549,GO:0044085,GO:0044093,GO:0044237,GO:0044248,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0044804,GO:0044805,GO:0045184,GO:0045859,GO:0045860,GO:0045937,GO:0046903,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051338,GO:0051347,GO:0051641,GO:0060255,GO:0061695,GO:0061726,GO:0061919,GO:0065007,GO:0065009,GO:0070727,GO:0070925,GO:0071702,GO:0071705,GO:0071840,GO:0072665,GO:0080090,GO:0098772,GO:1902494,GO:1902554,GO:1902911,GO:1903008,GO:1905037,GO:1990234,GO:1990316 |
EggNOG free text desc. | process utilizing autophagic mechanism |
EggNOG OGs | KOG4573@1,KOG4573@2759 |
COG Functional cat. | S |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko03029,ko04131 |
Exons | 10 |
Model size | 2637 |
Cds size | 2325 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1439.2636.1 >prot_H-paniculata_contig1439.2636.1 ID=prot_H-paniculata_contig1439.2636.1|Name=mRNA_H-paniculata_contig1439.2636.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=775bp
MNKRANILLRTLYSFVRMVPAYQVHKRIQRDFDSRERSPGVERDDMGFCL YPILDRGGGGSGLSFSTVPSNSDDGGCRIDRKMSTGCYSFKPLEAPHGSM RITVTYRRGVDPKARRRRENLGCPTSTMAPNMTTSIIQDYVPDKYSNDPT RQIGTESDSKLGGEVDGDKQIEFLPKFASMADLSTIRKPQVSEHEHGTNA MSGLGAALLHHNVDGRSGVQGRVQAYSLLGYRPGPDKGTDSFGETDLALG PGLLHWPSPEQGHGYADSRVYKLKGQGLAPFLTPGPHRHKLVPSGNQGHV GEMEPLDLGPTAGVRSRDRQRPADLLLLSSERSRCRAHAEEDRHNVNSRE PQYVLSGGDSIGAAQSESRSLDTHGSLEEYVGQRGRVQSLHRGCKLVPDV PPDTILPTTGLEQQTNAPLRSVYRRNSISEEPMGVATVLPHEQALLSVMK DNSQQSKREGATTGATSGPTGSTPPFSYYEDVSTARRAEANADEPPFELG HPLVSFSPPFDASPLTPGVHDQLPRAEGGELGDASPIRAVQAQSGTEVRC HGALTSFALAASFSPALLETLPESPFSSSVGTERSIHPAVSATATATSSR FSTPFALPILEGRSVSAPGNADQRTATAMQVIDSAEGLPFAVYGDGGMRE DIPDFIPEDSGVVSTECGSNITRSVPPSTLFALYSATSSKSMFLAKEGPP PELRTPAPCSSFDDGTTPVENGKEIDPTTAYSPSGRRLELMELAQETEKT VRSLEEELDGFRQFHEELGSVTRP* back to topmRNA from alignment at H-paniculata_contig1439:380..11725+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1439.2636.1 ID=mRNA_H-paniculata_contig1439.2636.1|Name=mRNA_H-paniculata_contig1439.2636.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11346bp|location=Sequence derived from alignment at H-paniculata_contig1439:380..11725+ (Halopteris paniculata Hal_grac_a_UBK monoicous) GTATGAAGCGCACGACTCAATCGGGAGTAAATCTACTCAGCGGCGGCATA
TGAACAAACGAGCGAATATTCTCCTGCGCACACTGTATTCATTCGTGAGG
ATGGTGCCGGCGTACCAGGTGCGAATTGCAGTTGCCAGTATCAAGTCACT
GTACACCCAAGTTATCATGGTAATAGTATTCCGTATATCAACATCAAGCA
ACTGTCCATACACGATTTTTTTGTGTAAATATGCTTCTGTGCTCTGGCGT
GTTGCTTTCCACGTAAATTAAGTTAAGTTAAGTTGACTTGATCCTTGACT
TGGTCCCTTTGACGAATAACGCCCCACGGAGATTGACTGGATGTTAGTAT
CCTCAGAAATTGATTGTCGAAGATAATTGAAGTTCGGCAAAATGAGGCGG
AGGCGACCCAAAATACCAATGACGATGAAAGCTGTGCGCTGTGCAGCACT
GTATAATTGTACTCGTACTCACAGATAATGGCTCAGGACTGTTGGTAATG
GCATATCAACAGTTAAGGGTGCGACGTATGTTTCTCCCGTAGAACAGGTG
ACCACTGCAGACATGCTGACAATCATCCCACAGCGGTCACTTAATTGCCT
GCACACAGCATGTTTTGGGCTTCTTTCGACGAGCACGAAAGTAGGCAAAA
CATGTGCGCATTACTGTACGGTATAGTATACATGTAGGTTCAGTCGATCG
TTACCCGGTGAATTGTTTTGTCGAGGACACGGCACGTTCGTTGCTTGTTT
TGACTGTTACAATGCAATACAAGGCCACAGACAACTCGCATTGGACAACA
AAATGGATGGACACTTTAACATGAACATTCGACACTCCATGGCCTGTGCG
AACTGGGTGACGAAGGAGAGCGTCACGTGGTGGTTCCAACTTGCAGAAAC
TGCCAAGTCTATTACCAACCCGTCGAAGACAAGAGTTTACGCGAGAAAAT
ATCGTGGCACAAATCTCCCCGTTTTTTCAGGCTCGTGATAAAAGGCTGGC
AGATTACTTGATTTGAATAGGCCACAGCGCGCTCATATTTTAAAGCAAAG
CGACGAACGTCGGCGCGAACTCGCCCCGTGGACATGGCAATCACGGGTTG
AAAAGAAGTACAACAAACATCAATCTGCGTCACGTTGTTAAACACACTAT
ATAATGCAGCAATTTGACCACTTGTTGCAGAGGTGCGTTATTCAACGTCC
CATGCTCGCCACAGAGAAACACTTGGATTGTGTGTAGCGCCTCCGTAGGC
CTCAAGGCCCGAAAGCCTAGCGTTCGGTCACCACCCAAAGTTAGCGTGGA
AAAGCACTAAGAGCGCAGGGGAAAAGTCCGTTGCTTCACCTGTGCTGTAA
AACTGCAGGGTGACGTCGATGATCTCGATACTGATATAACGGTGTAACCA
GATTCCCCTAGGAAAACGGTATTTCCCATCATTTTTCTCATACGAAAATA
ATCACTTTTTACGCTGCACACTCAGAAGCAGCTGATCCAAAAATACGCAG
TCATATCCACGTATAACGCACTCACAACAGCCTATCTGACCACTGACCGG
CTGAATTGGTGTAATTTTCGGCGATCGGGTCGGACTCACAGTGTCTTTAG
GAATGACACAATAGTGCTGATATGCAGGCAAAACAGAGCCAGCTTTCGAG
AGCACCTGTGTTCTGTCAGAACTGCACGTCAATACAGACAATAATTTACA
GTCAATCTCTGAGTTTATACATTTTTCAACACGTTTCCGAGGATTCAGAT
CATCTGCACAGCTAAAATCTGCATGAGCAGGGATTTACATCCACGTGGAT
GTCGACCCCATTTTAGTTTATCTAAAAATTGTAATGATCACACATGGCCT
TCGACATGACTTGGACAATCATTCAGTGCATTTACTGGCCAAATTCATCT
CATTTTCAGCGATCGCCCTTTGTGTAAGTAATGGGTAGCCGGCAGCACCA
TCCAGGCGCCGCTGTGTGAATGGAGTTTGAGTCTCGCCTACGGGATTCCT
GATTTCTTGGCTCCGTCTAATTTCTTGTCTTAATTGCAATCAAACAGGTG
GGAATTCCCCACGTCTCTCCAGTCCGCCCCCCAGCTTGAGGAGCTGTAGG
GGCGTCTGGCGACGCAACCACACGATGTCGAATATGCGCATTGGTTATGC
GGGCTACCCTCTGGATGATGACCAAAGTCATGTTCCCTACCCCCGTTTCA
ATAGGAGGTCGTATTTTGCATTTGTATTTTTTTCCCGCTTCTTATGGGTT
ACGAAACAGATGCTTGGAGTTAGGCTCGGCAGAATTAAAGTTTTTTTTTA
TTCCGAGTTTATTCTAGGGCGCTAGTCCAGAGCCGGTACACCGGGCGAAA
ATGGTCTTAACCCGGTACAGTTTCTTCCCGTAATTCAGGGTGACATCAAA
TACAACAAGCTCCACCGGAAACTCACATGGCACACTCTCATACACCCACG
GCAGTCATTCGTCGAAGAACCACTAGAAAAAAAATGTATTTTGGCCTTGT
GCCACCGCCGCAAAATTGGTGATTTCCTGAGGGCACCACACTGTACCGGT
TGTAGACCAAAAAGGCGCCCGGTGTAACGGGTTGAGGATTTCTTTCCGAA
AGTATACCGGTTATAGACCGATTAGACAACGGGATGTTCCTATATGCTAC
GCACCAGCGCAGCCTACCGCCGGGCAAATGTCACTGTTTTCCACAAAGGC
TGGACGCTGCTGGCTCTAATGACCACCACGCGGGATCTCTTTCTGGCCCT
CTGGCTGATGAAAGAACCATAGAACAAGAACCAGGATACATGCCAGCATC
ATATCCAACCAAGTGTTGTCGGCTGCTGTGCTGTACTGTGCTGACTCGTG
CCGTACATGTGGGCAGTAAGAAGCGTTCGATTTTTCCCTTTCGAATGTAC
ATTGCAAACGAAAAAAAAGGTGACACAAATCTACCCAACACTTAAAACAG
CCCCAAGAACAAACACCAGGACGCGGACATTCAGGCGCGATCGTCTCGAC
AATGACGTGATGCTAGCTAATGACGAGGGGATGTCACCGTGAAGACCCCC
GCTTGATACACCTACACACTTTTACCTACCACGCGGTGCACTACCGGCGG
TGCTGTTTTGATGCAACGTCGACCTCGCACAAAGATATCCCTGCGCTGAC
GTATGCGTGTATTAAGCACCTGAAGACCCACTCCCCACCTTCTTGGTACG
GCGGATTGAAAATAACTTTAAAGGAAGCGTTTGTTGGCGAACGAGAGAGG
TCTGCGCCATAAAGCTCTGTGGCGCACCCAATTCGTCATTGAATAAAATA
CCCAATTCGTATCTCTTGCTTCAATCAATTGTCTGTGGTAAGCGTACATA
GCAGGTCCCTCTTCTCGCTCTGTGCAGCAGTTTGGAGGCTGCGTGTAGTC
CTCATCGCAAATCGAAACACTTCTCTGTCTAATTTGCCAGCTTTGACTTT
GTGTGGTAATCGAACTTAGCCGGCCCCTCTTGAATAACACAACCAACCAA
GCCTAAAATGCCGACAATACTTGGTTGGATATGATGCTGGCATCTATCCT
GGTTATTGTTCTAGGATTCTTTCATCAGCCAGAGGGCCAGAAAGAGATCC
AACGAGGTGGCCGTTAGAGCCAGCAACGTCCAGCCTTTGTGGATAACGGT
GATATTTTGCCCGGCGGTAGCATGTAGGAAGATCCCGTTGCCTAACTGGT
CTACAACCGGTATGCTTTTGGAAAGAAATCCTCAACCCGTTACACCGGGC
GCTGTTTTGGTCTAACACCGATACAATGTGGTGCCCCCAGGAAATCACCA
ACTTTGCGGCGGTGGCACAAGGCCAAAACGATTTTTTTTTCTAGTGGTTC
TTCGACGAATGGCTGCCGTGGGTGTATGAAAGTGTGCCATGTGACTTTTC
GGTGGAGCTTGTTGTATTTAGTATCACCGTGATTTACGGGAAGACACTGT
ACCGGGTTGAGACCATTTTCGCCCGGTGTACCGGCTCTGGACCAGTGCCC
TTTATTCTATGTAAAGGTGAGCAGTATTTGCAGCTCATAGTTGGGCTACT
TTAAACCAGTAGGGCATGTCGGATCTTTCTTTTCTTGCAGTATCTCATGT
ATCGAAAAATGCACCCGAGAAAAAGGGGATTATGCGCCCATTTGCTCTTC
CTTGCGCCGTGCTGTTTCCTGCTGCACTCTGAGCATATCATGCCAGATGG
TTAGATAAGGTGCCAAATATAAAATAATTTTTCCATTCGGAAATCGTCAA
TTTTGTCAAAACGTGCATTTATTTATGAAACAGAGCTATCGCTCACGTTG
GCTGTTGATGGCGATGACGGTAGTTGTAATAGAAGCGAAATGAATACACG
AGCGATGCTCCAATTGCTGTGTACGGTACATTTGTATTCTCTGCCGGAGG
TAAACCGTCATACGCTGGTTCCCGGTCCGGCGTTGTTCATTCGACAGGTT
CACAAGCGAATTCAAAGAGATTTCGACAGTAGGGAAAGGTCTCCTGGGGT
CGAGCGAGATGACATGGGTTTTTGCCTATATCCGATACTCGATAGAGGTG
GTGGTGGCTCAGGGTTAAGTTTCTCTACTGTTCCCTCCAATAGTGATGAC
GGCGGATGCCGCATAGATCGGAAGATGTCCACCGGGTGCTACTCATTCAA
GCCACTGGAAGCCCCTCACGGCTCAATGAGGATCACAGTTACCTATCGAC
GGGGTGTTGACCCAAAGGTGAATACTTATTCCGGGTATTGTGGTAGCGTT
GCCAGTCATGTTCCGTTGGGTTTGCTGCTGTCTGCTACCTTGACTAAAAA
ACGATGACTTGCGTCCATTATACTCCAGGTTAAGAAGTAACAGCAACCCT
GTGATGCGTAGTAATGCTTATGCGACGATTTTCTCTATAATAGTCACGGC
AGTGTGATTATTTATGCCTCGAGACCTCGTTGTCTGAAAAAGTATCCCAT
GATGTGCTCCAAAAGCGAAGTAGTACGTAGAGGTTGCCAATTGCACCCAA
AACAGTGGCGATATCACCGTTGGTGTGGTGACGGCTATGCTCGTGGAGTC
TGTTTTTTGTCATACGCCCAGTAAACCATGTATGCCATTGGAGATCGCAC
CGCAGGTTGTACAGTAGAGTCCAGTTAGTATGCGCAGTCAGAGTACTTTC
CTACACATGTAGTTCGAACAAACGCCGATCGGCGGTGTGCAAATACCACT
CGTTGCCAAAAATGTCCCCAAAAGAATAAAAACAAACTGCTCCATGTGCC
ACAGATAGTTTTTAGACACACTTCACTTGGATAGAGCTCTAGAGATCTCC
AGCATGGGGAAATGTTTTAGCAGAAACCTACTGCTATTCAGCTCTACCGT
ATCAATTAATAGGGATCCTAAACATTTATCGTCATGGCTCTGGTTGATTC
CCCTGGGCAGGCAAGGCGAAGAAGAGAGAATCTGGGGTGTCCAACTTCTA
CCATGGCACCCAATATGACCACGAGTATCATTCAGGACTACGTGCCAGAC
AAGTACTCGAACGATCCAACGCGACAAATTGGTACGGAGTCCGACTCTAA
GCTTGGAGGAGAAGTAGATGGCGACAAGCAGATAGAGTTCTTGCCCAAGT
TCGCTAGTATGGCGGATTTATCCACTATTCGAAAGCCACAAGTTTCAGAA
CACGAACATGGAACTAATGCTATGAGCGGACTCGGCGCTGCATTGCTTCA
CCACAACGTAGACGGTCGATCCGGTGTGCAAGGTAGAGTGCAGGCTTACT
CCTTGTTGGGATATAGGCCAGGCCCAGACAAGGGTACTGATTCTTTCGGA
GAAACAGATCTTGCGCTGGGACCAGGGCTTCTCCACTGGCCGTCTCCGGA
ACAGGGCCACGGTTATGCTGACAGCCGTGTGTACAAGCTCAAGGGGCAGG
GTCTAGCACCGTTCCTTACACCTGGACCGCATCGGCACAAGTTGGTGCCC
AGTGGCAACCAAGGGTAAGATACGAACCTGTCTCAGACATCGCCTCTCAA
CGTGGAGAGCAAATCTGCACCGGAAATAACCCACAGGCTTGTTCGTGATA
TTACTAACTCACCGGCGCTCGACACGATCCATCAGGCACGTCGGCGAAAT
GGAGCCGCTGGATTTGGGCCCAACTGCCGGGGTGCGATCGCGAGACCGTC
AACGGCCAGCTGACCTTCTGTGAGCTCTTACTTTGTCGCTCTATTTCCGT
GCAACTTGCTCTTGGTGGACACGTTTGATTAGTTGAGTCAATCAAGCACA
CTTGTGTTCAATTTGGCACGGGAGGGACGCGGCACATTTGATTTCGTCGT
TGATTCTGTGCATCAATCGAAATAAACGAGGGCACAGGACTCGTGTCGAG
TATGAACACCATACCGTTAACGTCCCGACAGGCTGGGCCCAGCAAGAGAG
ACCAAAAACCTTCCACGGGTATTTTCTCACTTGGTTATTTGGAATTTGGA
CCTGAAACTTTGAGGGCAAATGCGCATAAAAAATTTGGAGACTTTTAAAA
ATGACATCCACTGCGTTTGCAGCCGAACGTGAGATTTGGTCCGTCGAAGT
TTTTTGGTCTCTCTTGCTGAGCCCAGCCTGTAGATTTCCACAAGGAGGTA
TTATGGACGAGTTGCGGAAATCAAGCCTTTGCGCTGTTGTCAAGTGATGT
CGAATCTCACATGTATCAACGAGCCGAAAAACCTACCAGGTGGTTGAACT
TGGGTAACAGAGTTCATGCCACGTCAGGGTACAGGCTTGAAATGAGTATC
GAAAAACAAAGGAAACCTGAATCTTACTATCTATGTTGGGAACCAGACGA
GAGCTTGCGGTATCACGACGTGGTGCACTCATCTCAGGTGATGCAATACC
TATGGCCCACAACGTAATGGGGTTGCAGGTTATTATCGTCAGAGCGCAGT
AGATGTCGCGCTCACGCAGAGGAAGACCGCCATAACGTCAACTCACGAGA
ACCGCAATACGTGCTCTCTGGTGGAGATTCGATTGGTGCCGCGCAATCAG
AGTCTCGTTCTCTCGACACCCACGGCAGTCTTGAGGTGTGGAGCGTCTAC
CGCATTTTTATCATCTGACGTGTCCATGTTGAAGGGTCAGCTGGCTGTGT
TGCTTGTGTTGCGCTGATTAGATTAATAGATCCATGTTAAAGTTGGATGT
AGGCTCCTGTTGAGAAAGTATTACGCTAATATGTGTAAATGCGCAAATGT
TTTACTGAGTCTGAACTGCGTCAGTCAATTTACATGAGCCCGCTGACTAT
TGCAAAAGCTCTTGTTCTTTGAGACAATTTACGATGACAAGTAGTACATG
GTGGCCGATGAAGAGGGATCAATCAATCTGCCGATGAGAACGTCGCCCCT
TGCTGGGCTGTCTTCGGTGTATTTACAGGAATATGTGGGTCAGAGAGGGA
GAGTGCAGTCGCTGCACCGTGGTTGCAAGCTTGTGCCGGATGTTCCACCT
GACACTATTTTGCCGGTGAGAGAGGGTGGTGCGACTCTCATATTTTTTCT
CAGATAGCGATGACCTCAACAACATTGATCCTGGCTTGTCGAGATTGCCA
ACTTTATTGATACCACAGTAGATTTGCAACGTGTTCGAGCTTTCTCTGTT
GACTATTAGCGGGCTTTATTGGGGACTTGTGCTCCATCATCAACTCGTGT
GTGTGATTGGCCAACAATGTTTTTCTCTATTAGTCTTACAAGCTCAGTAA
CAACTACAGTCGTGGTTCGTTGACAGAGTGCACGACGTCTTTGCTGTTTA
TTAATAATGCAGACAACTGGACTCGAACAACAAACCAACGCTCCGCTGCG
ATCGGTATACCGACGAAATTCCATCAGCGAGGAACCCATGGGTGTGGCCA
CGGTATTACCGCATGAGCAAGCCCTACTTTCGGTGATGAAAGACAATTCG
CAGCAGAGCAAGCGTGAAGGTGCCACGACGGGAGCAACGAGCGGACCAAC
CGGATCCACGCCGCCATTTTCGTACTACGAGGACGTGAGCACAGCCCGCC
GTGCTGAGGCCAATGCTGATGAACCACCGTTCGAGCTGGGCCACCCCCTC
GTCAGTTTCAGTCCGCCGTTTGATGCTTCTCCGCTCACCCCAGGCGTACA
TGATCAGCTCCCACGAGCGGAAGGCGGCGAATTGGGCGATGCGTCACCGA
TCCGTGCAGTGCAAGCACAAAGTGGGACAGAAGTTAGATGTCACGGCGCA
CTCACCTCTTTCGCGCTTGCCGCTAGTTTTTCACCAGCTCTCCTCGAGAC
CCTGCCAGAATCGCCGTTCTCATCGAGTGTTGGGACAGAACGAAGTATTC
ACCCTGCTGTATCTGCAACTGCAACGGCGACCAGCTCTCGATTTTCTACC
CCATTCGCGCTACCGATTCTTGAAGGACGGTCGGTCTCTGCTCCAGGAAA
TGCGGATCAGAGAACTGCAACTGCGATGCAAGTTATTGACAGCGCAGAGG
TGAGCAGGATGCATGTGCTGCCATGCGGATGGCCGATGTCTTCGCCTGTC
AGCTGCCGTATCTTCTGTCCTTTGCTGTATATCGCAGACGAGAATAATAA
CTGTGTGTGGTCACTGATTGTCGCTGCGCTGTAGAACCAGAGAACAAGCT
CAGCGGAAGAGATAGTTCTTTCACTACAGAGTCGGAAATAGGACATGAAC
TCCCGTGAGAGAAGAATACGACCCTCCGCCCGCTCAATGGACCACCCACT
TAACACAAATCTCCTTGCTCGCCCGAAGGTTTGTGAACCCTTGGATATGA
ATCCTAATCTATTGTGTAGATGTATAGCCCCGCAGGGTCACAGCACCATT
GCTCTCTCTTTTGATTTTTTTTGGGGGGGGATTGCTGGCTTCCCTTCGTG
CGTTACTATTATGCGGCTGTAATGACTCAGTCTTTGGTGAATAAGTCTGG
AAACTGAGCCCCAAACTACCTTCAAACACCGAAAACAGACGGACGTGCGA
TAGTTGCTAGTATTGCCTTTTCAAGGTGTCGAATATCGAATCACTGGAAT
ACCATTTGTTTTTTCATCGAAAAATGCTGCCGTTTAAAATTGCTGTTGTG
GGAACTGGGAGCTGCTGTCGATTGAACATACCTCTGAAATGAGAGGAGGC
TGAAATTTGTTTTTGATACAACTCAGCAATGAACCCGAAGTGTGAATTTA
ACAGGATACGACACGATGTCTAATCTTTGATTTGATGCTTGTAGTATCCA
ACTCCTAGCCTGTCCATCGATGTGGGGATATCACTTCGCGCTTCTAAGGT
ATTTATTAATTCACGAAGAGACCCCTTCCAGAGGAAGCGATACAGTGGGC
CGTGGATGGAGATCTCATTCGTCAAAAGATGGGAAACCCAAGTGTAGTGG
AAAAAATGAGACTATTCACACCTTTGCGTTGTGATGGCAAATATCGGCTG
CAAGATGGTCAGAGGGAATGCGGAGAACTTCTTGTTTGAGTTGTACAGTG
CGGTGGTCTGCCCAAGGAATATTACCGGTCCGCTGCTTGTTCAAAATGTA
TCGGCTAGACGGTGTTCGATCCGCTTGCGACGGCCCGCTTTCCGGTCCTG
AACGTGTCAACATAATGACATATACGCAACTTTTTGTCTAGTGTTTTTTT
CGTGGTGTGATGTTGCTGTAGGGCCACCACTTGCAAATACTTGAGAGCTG
CGGCGTTACTATTATGCAGCTCTAATGGTTGAGCGCACCGCGCATCTTCC
TCGCCTATCTCATCGAACGTCAGGGTCTACCGTTTGCTGTGTACGGTGAC
GGGGGTATGCGAGAGGATATTCCTGATTTTATTCCGGAGGATTCGGGTGT
CGTTAGTACGGAGTGCGGAAGCAACATCACCAGAAGCGTCCCTCCATCGA
CGTTGTTTGCGTTGTATTCTGCCACAAGTTCCAAGTGAGTGCAAAGTCTT
TGTGTCTGAACGATGGAAATACCGAGTAGATCGATGGCCGGGATAAGTCA
GACTGCAGTTACGAATGTTGCAGGCATCGTACCGTTACGAATGCCGTATT
CGTATTTGTGAGTAAGGGTAAAATATCTACTTCTGCCTTCCCTTGACGTG
ACATTGAACATTTGTCGTAAAATCGGTGTTGGTCTACGTTGTGCGTCAGC
TGCAAAGACGTAGGGCGCTGTAGCCTGAAACATCGTTGTATGTGTTTGGC
AGCATCGAGGAAACGATCATGATGCTGACTTGGACAAATCAGTTTAGGAC
GATGGATGGATATTCATTTCACAGTAGTAATAATACCAAAATCTTCGCTC
GCAAAATTGTGTATTCGCTTCAGATCGATGTTTTTAGCGAAGGAGGGTCC
CCCACCAGAGCTGAGGACGCCGGCGCCGTGTAGCTCTTTTGATGATGGTA
CCACACCCGTCGAAAATGGCAAGGAAATAGACCCTACCACTGCGTACTCT
CCCAGCGGAAGAAGGTTGGAATTGATGGAACTCGCACAGGAGACGGAGAA
AACAGTGGTGAGGTGTTATCGTTTTGACATGTGCAATCGATAAGTCACTC
TCATTTTTTACTGTGAAGGAGTAGTTTATTTCGTGGGTGAGCACTATGTG
CGAGTTAGGGCAATCAAAACAAGATCCCGTGATAGATAGCGTCCATTTAT
TACGTCATGTGGGGGCGGCCGCTGTAAGTAAGTGATGGTGTCTTGTGAAT
CCACGCGGCATCACGATCGTTGTGAACAGTGTACCTCATGAGAAATTGCA
TGGTTTGGTTTGGTTTTGTTGTGAAAACTCGAACTGAACCTATTAGAAGT
ATCGAAATATTCCATGGGAAAGCGTCTCGAACTGTTGTACGTTATCTCTA
GACTGCGAGAATCAGACCCATTTCAACAGTATCTCCATTCGGACGAAACG
CTCTTTGGCATGGCTGGCGTGCACGAGTGACCCTATGTAACTGGAATCAA
ATCGAACACCCCATACCATGGTTTACTCCACGCAAAAACATGAAAAAAAT
AATACCATCGAAAGACTAACGAAAGACTAACCATCTTGCAAAATACATCA
TTTTTGACCAGCGTTCGTTGGAGGAAGAGCTGGATGGTTTCCGACAGTTT
CATGAGGAGCTTGGCAGCGTCACGCGTCCTTGATCAAGAATATTCTCTTC
ATATTGGTTGTGTCAACGGGGGCGCAACCACGTGTGAAATGGACCGTTTA
TCCATACGGTAGACACGGGTTACAGTAGCGGCGGCAGATCCACATTTTGT
GGTTAAAAAAGGGTGTATTTTACCATTTACTGAGAACAGTATTACATTAT
TTACTCATCACTCTAGTGAATGTTGATAACTGTGGTAACGTTTTCATTGT
GACACATGGAGAGTGCCGTTGATATAAATCTTTTGTCGCCGCTCCA back to topCoding sequence (CDS) from alignment at H-paniculata_contig1439:380..11725+ >mRNA_H-paniculata_contig1439.2636.1 ID=mRNA_H-paniculata_contig1439.2636.1|Name=mRNA_H-paniculata_contig1439.2636.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4650bp|location=Sequence derived from alignment at H-paniculata_contig1439:380..11725+ (Halopteris paniculata Hal_grac_a_UBK monoicous) ATGAACAAACGAGCGAATATTCTCCTGCGCACACTGTATTCATTCGTGAG GATGGTGCCGGCGTACCAGATGAACAAACGAGCGAATATTCTCCTGCGCA CACTGTATTCATTCGTGAGGATGGTGCCGGCGTACCAGGTTCACAAGCGA ATTCAAAGAGATTTCGACAGTAGGGAAAGGTCTCCTGGGGTCGAGCGAGA TGACATGGGTTTTTGCCTATATCCGATACTCGATAGAGGTGGTGGTGGCT CAGGGTTAAGTTTCTCTACTGTTCCCTCCAATAGTGATGACGGCGGATGC CGCATAGATCGGAAGATGTCCACCGGGTGCTACTCATTCAAGCCACTGGA AGCCCCTCACGGCTCAATGAGGATCACAGTTACCTATCGACGGGGTGTTG ACCCAAAGGTTCACAAGCGAATTCAAAGAGATTTCGACAGTAGGGAAAGG TCTCCTGGGGTCGAGCGAGATGACATGGGTTTTTGCCTATATCCGATACT CGATAGAGGTGGTGGTGGCTCAGGGTTAAGTTTCTCTACTGTTCCCTCCA ATAGTGATGACGGCGGATGCCGCATAGATCGGAAGATGTCCACCGGGTGC TACTCATTCAAGCCACTGGAAGCCCCTCACGGCTCAATGAGGATCACAGT TACCTATCGACGGGGTGTTGACCCAAAGGCAAGGCGAAGAAGAGAGAATC TGGGGTGTCCAACTTCTACCATGGCACCCAATATGACCACGAGTATCATT CAGGACTACGTGCCAGACAAGTACTCGAACGATCCAACGCGACAAATTGG TACGGAGTCCGACTCTAAGCTTGGAGGAGAAGTAGATGGCGACAAGCAGA TAGAGTTCTTGCCCAAGTTCGCTAGTATGGCGGATTTATCCACTATTCGA AAGCCACAAGTTTCAGAACACGAACATGGAACTAATGCTATGAGCGGACT CGGCGCTGCATTGCTTCACCACAACGTAGACGGTCGATCCGGTGTGCAAG GTAGAGTGCAGGCTTACTCCTTGTTGGGATATAGGCCAGGCCCAGACAAG GGTACTGATTCTTTCGGAGAAACAGATCTTGCGCTGGGACCAGGGCTTCT CCACTGGCCGTCTCCGGAACAGGGCCACGGTTATGCTGACAGCCGTGTGT ACAAGCTCAAGGGGCAGGGTCTAGCACCGTTCCTTACACCTGGACCGCAT CGGCACAAGTTGGTGCCCAGTGGCAACCAAGGGCAAGGCGAAGAAGAGAG AATCTGGGGTGTCCAACTTCTACCATGGCACCCAATATGACCACGAGTAT CATTCAGGACTACGTGCCAGACAAGTACTCGAACGATCCAACGCGACAAA TTGGTACGGAGTCCGACTCTAAGCTTGGAGGAGAAGTAGATGGCGACAAG CAGATAGAGTTCTTGCCCAAGTTCGCTAGTATGGCGGATTTATCCACTAT TCGAAAGCCACAAGTTTCAGAACACGAACATGGAACTAATGCTATGAGCG GACTCGGCGCTGCATTGCTTCACCACAACGTAGACGGTCGATCCGGTGTG CAAGGTAGAGTGCAGGCTTACTCCTTGTTGGGATATAGGCCAGGCCCAGA CAAGGGTACTGATTCTTTCGGAGAAACAGATCTTGCGCTGGGACCAGGGC TTCTCCACTGGCCGTCTCCGGAACAGGGCCACGGTTATGCTGACAGCCGT GTGTACAAGCTCAAGGGGCAGGGTCTAGCACCGTTCCTTACACCTGGACC GCATCGGCACAAGTTGGTGCCCAGTGGCAACCAAGGGCACGTCGGCGAAA TGGAGCCGCTGGATTTGGGCCCAACTGCCGGGGTGCGATCGCGAGACCGT CAACGGCCAGCTGACCTTCTGCACGTCGGCGAAATGGAGCCGCTGGATTT GGGCCCAACTGCCGGGGTGCGATCGCGAGACCGTCAACGGCCAGCTGACC TTCTGTTATTATCGTCAGAGCGCAGTAGATGTCGCGCTCACGCAGAGGAA GACCGCCATAACGTCAACTCACGAGAACCGCAATACGTGCTCTCTGGTGG AGATTCGATTGGTGCCGCGCAATCAGAGTCTCGTTCTCTCGACACCCACG GCAGTCTTGAGGTTATTATCGTCAGAGCGCAGTAGATGTCGCGCTCACGC AGAGGAAGACCGCCATAACGTCAACTCACGAGAACCGCAATACGTGCTCT CTGGTGGAGATTCGATTGGTGCCGCGCAATCAGAGTCTCGTTCTCTCGAC ACCCACGGCAGTCTTGAGGAATATGTGGGTCAGAGAGGGAGAGTGCAGTC GCTGCACCGTGGTTGCAAGCTTGTGCCGGATGTTCCACCTGACACTATTT TGCCGGAATATGTGGGTCAGAGAGGGAGAGTGCAGTCGCTGCACCGTGGT TGCAAGCTTGTGCCGGATGTTCCACCTGACACTATTTTGCCGACAACTGG ACTCGAACAACAAACCAACGCTCCGCTGCGATCGGTATACCGACGAAATT CCATCAGCGAGGAACCCATGGGTGTGGCCACGGTATTACCGCATGAGCAA GCCCTACTTTCGGTGATGAAAGACAATTCGCAGCAGAGCAAGCGTGAAGG TGCCACGACGGGAGCAACGAGCGGACCAACCGGATCCACGCCGCCATTTT CGTACTACGAGGACGTGAGCACAGCCCGCCGTGCTGAGGCCAATGCTGAT GAACCACCGTTCGAGCTGGGCCACCCCCTCGTCAGTTTCAGTCCGCCGTT TGATGCTTCTCCGCTCACCCCAGGCGTACATGATCAGCTCCCACGAGCGG AAGGCGGCGAATTGGGCGATGCGTCACCGATCCGTGCAGTGCAAGCACAA AGTGGGACAGAAGTTAGATGTCACGGCGCACTCACCTCTTTCGCGCTTGC CGCTAGTTTTTCACCAGCTCTCCTCGAGACCCTGCCAGAATCGCCGTTCT CATCGAGTGTTGGGACAGAACGAAGTATTCACCCTGCTGTATCTGCAACT GCAACGGCGACCAGCTCTCGATTTTCTACCCCATTCGCGCTACCGATTCT TGAAGGACGGTCGGTCTCTGCTCCAGGAAATGCGGATCAGAGAACTGCAA CTGCGATGCAAGTTATTGACAGCGCAGAGACAACTGGACTCGAACAACAA ACCAACGCTCCGCTGCGATCGGTATACCGACGAAATTCCATCAGCGAGGA ACCCATGGGTGTGGCCACGGTATTACCGCATGAGCAAGCCCTACTTTCGG TGATGAAAGACAATTCGCAGCAGAGCAAGCGTGAAGGTGCCACGACGGGA GCAACGAGCGGACCAACCGGATCCACGCCGCCATTTTCGTACTACGAGGA CGTGAGCACAGCCCGCCGTGCTGAGGCCAATGCTGATGAACCACCGTTCG AGCTGGGCCACCCCCTCGTCAGTTTCAGTCCGCCGTTTGATGCTTCTCCG CTCACCCCAGGCGTACATGATCAGCTCCCACGAGCGGAAGGCGGCGAATT GGGCGATGCGTCACCGATCCGTGCAGTGCAAGCACAAAGTGGGACAGAAG TTAGATGTCACGGCGCACTCACCTCTTTCGCGCTTGCCGCTAGTTTTTCA CCAGCTCTCCTCGAGACCCTGCCAGAATCGCCGTTCTCATCGAGTGTTGG GACAGAACGAAGTATTCACCCTGCTGTATCTGCAACTGCAACGGCGACCA GCTCTCGATTTTCTACCCCATTCGCGCTACCGATTCTTGAAGGACGGTCG GTCTCTGCTCCAGGAAATGCGGATCAGAGAACTGCAACTGCGATGCAAGT TATTGACAGCGCAGAGGGTCTACCGTTTGCTGTGTACGGTGACGGGGGTA TGCGAGAGGATATTCCTGATTTTATTCCGGAGGATTCGGGTGTCGTTAGT ACGGAGTGCGGAAGCAACATCACCAGAAGCGTCCCTCCATCGACGTTGTT TGCGTTGTATTCTGCCACAAGTTCCAAGGTCTACCGTTTGCTGTGTACGG TGACGGGGGTATGCGAGAGGATATTCCTGATTTTATTCCGGAGGATTCGG GTGTCGTTAGTACGGAGTGCGGAAGCAACATCACCAGAAGCGTCCCTCCA TCGACGTTGTTTGCGTTGTATTCTGCCACAAGTTCCAAATCGATGTTTTT AGCGAAGGAGGGTCCCCCACCAGAGCTGAGGACGCCGGCGCCGTGTAGCT CTTTTGATGATGGTACCACACCCGTCGAAAATGGCAAGGAAATAGACCCT ACCACTGCGTACTCTCCCAGCGGAAGAAGGTTGGAATTGATGGAACTCGC ACAGGAGACGGAGAAAACAGTGATCGATGTTTTTAGCGAAGGAGGGTCCC CCACCAGAGCTGAGGACGCCGGCGCCGTGTAGCTCTTTTGATGATGGTAC CACACCCGTCGAAAATGGCAAGGAAATAGACCCTACCACTGCGTACTCTC CCAGCGGAAGAAGGTTGGAATTGATGGAACTCGCACAGGAGACGGAGAAA ACAGTGCGTTCGTTGGAGGAAGAGCTGGATGGTTTCCGACAGTTTCATGA GGAGCTTGGCAGCGTCACGCGTCCTTGACGTTCGTTGGAGGAAGAGCTGG ATGGTTTCCGACAGTTTCATGAGGAGCTTGGCAGCGTCACGCGTCCTTGA back to top
|