prot_H-paniculata_contig1438.2634.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig1438.2634.1
Unique Name	prot_H-paniculata_contig1438.2634.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	168

Homology

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BLAST of mRNA_H-paniculata_contig1438.2634.1 vs. uniprot
Match: D8LBS0_ECTSI (eIF-5a domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS0_ECTSI)

HSP 1 Score: 319 bits (818), Expect = 1.200e-109
Identity = 156/165 (94.55%), Postives = 160/165 (96.97%), Query Frame = 0

Query:    3 RKTMATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEFQLLDISDDGFCSLLTEEGDTKDDLQLPTYPEGFGQEIKNQFEEGKTLCVTVMAAMGHEQIVTYKEESG 167
            + TMATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVV RNE+QLLDISDDGFCSLLTEEGDTKDDLQLPTYPEGFG EIK +F+EG TLCVTVMAAMGHEQIVTYKEESG
Sbjct:   36 KSTMATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPEGFGNEIKAKFDEGATLCVTVMAAMGHEQIVTYKEESG 200

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BLAST of mRNA_H-paniculata_contig1438.2634.1 vs. uniprot
Match: A0A6H5KDL5_9PHAE (eIF-5a domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDL5_9PHAE)

HSP 1 Score: 320 bits (820), Expect = 3.860e-109
Identity = 158/166 (95.18%), Postives = 160/166 (96.39%), Query Frame = 0

Query:    2 SRKTMATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEFQLLDISDDGFCSLLTEEGDTKDDLQLPTYPEGFGQEIKNQFEEGKTLCVTVMAAMGHEQIVTYKEESG 167
            S  TMATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVV RNE+QLLDISDDGFCSLLTEEGDTKDDLQLPTYPEGFG EIK +FEEG TLCVTVMAAMGHEQIVTYKEESG
Sbjct:   89 SLSTMATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVSRNEYQLLDISDDGFCSLLTEEGDTKDDLQLPTYPEGFGNEIKAKFEEGLTLCVTVMAAMGHEQIVTYKEESG 254

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BLAST of mRNA_H-paniculata_contig1438.2634.1 vs. uniprot
Match: A0A835Z7R2_9STRA (Eukaryotic translation initiation factor 5A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7R2_9STRA)

HSP 1 Score: 250 bits (639), Expect = 7.520e-83
Identity = 116/163 (71.17%), Postives = 143/163 (87.73%), Query Frame = 0

Query:    4 KTMATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEFQLLDISDDGFCSLLTEEGDTKDDLQLPTYPEGFGQEIKNQFEEGKTLCVTVMAAMGHEQIVTYKEES 166
            +T AT++ LN+YDFT +DAGASHT P +AGQIRKGGYIVIKG PCKV NVSTSKTGKHGHAKANFTA DIFTGKKLED++P++H TSVP V R ++QLLDISDDGF SLLTE GDTKDDL+LP +PEGF ++++ +F+ GKTL VTV++AMGH+Q++ YKE++
Sbjct:    3 ETSATDEALNNYDFTSSDAGASHTFPMDAGQIRKGGYIVIKGRPCKVANVSTSKTGKHGHAKANFTAIDIFTGKKLEDIVPTSHATSVPNVARVDYQLLDISDDGFLSLLTESGDTKDDLKLPGFPEGFDEQLRTEFDAGKTLIVTVVSAMGHDQVMAYKEDT 165

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BLAST of mRNA_H-paniculata_contig1438.2634.1 vs. uniprot
Match: A0A7S2UU65_9STRA (Eukaryotic translation initiation factor 5A n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU65_9STRA)

HSP 1 Score: 227 bits (579), Expect = 8.700e-74
Identity = 109/156 (69.87%), Postives = 134/156 (85.90%), Query Frame = 0

Query:   11 KLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEFQLLDISDDGFCSLLTEEGDTKDDLQLPTYPEGFGQEIKNQFEEGKTLCVTVMAAMGHEQIVTYKEES 166
            KL+D+ F   ++GAS TIP EAGQIRKGG+IVIKG PCKVVNVSTSKTGKHGHAKANFTA DIFTGKK ED++P+THTTSVP V R E+QL+DISDDG+ SLLT+ GDTKDDL LPT+PEGF  EI+  F+EGK++ +TV++AMG +Q+V+ KE++
Sbjct:    7 KLDDFHFDTGESGASLTIPMEAGQIRKGGHIVIKGKPCKVVNVSTSKTGKHGHAKANFTAIDIFTGKKYEDIVPTTHTTSVPNVSRAEYQLIDISDDGYLSLLTDSGDTKDDLVLPTHPEGFADEIRAAFDEGKSMVLTVLSAMGTDQVVSMKEDT 162

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BLAST of mRNA_H-paniculata_contig1438.2634.1 vs. uniprot
Match: W7U6Y6_9STRA (Eukaryotic translation initiation factor 5A n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6Y6_9STRA)

HSP 1 Score: 224 bits (570), Expect = 1.970e-72
Identity = 111/166 (66.87%), Postives = 136/166 (81.93%), Query Frame = 0

Query:    1 MSRKTMATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEFQLLDISDDGFCSLLTEEGDTKDDLQLPTYPEGFGQEIKNQFEEGKTLCVTVMAAMGHEQIVTYKEES 166
            M+ +  AT   + DYDF+GT AGAS   PSEAGQI+KGGYI+IKG PCKVVNVSTSKTGKHGHAKANFTA DIF GKK+EDV+P+THTT VP V R+E+QLLDI +DGF SLL E+G T+DDL+LP YPEGF QEI   +++GK+L V+V++A G +QI+ YKEE+
Sbjct:    1 MAEEAAAT---IEDYDFSGTTAGASDVFPSEAGQIKKGGYIMIKGRPCKVVNVSTSKTGKHGHAKANFTAIDIFNGKKVEDVVPTTHTTYVPNVNRSEYQLLDI-EDGFVSLLQEDGGTRDDLKLPDYPEGFDQEILKAYQDGKSLSVSVLSACGIDQIIAYKEEA 162

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BLAST of mRNA_H-paniculata_contig1438.2634.1 vs. uniprot
Match: A0A8K1CGM3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGM3_PYTOL)

HSP 1 Score: 221 bits (562), Expect = 2.950e-71
Identity = 104/154 (67.53%), Postives = 127/154 (82.47%), Query Frame = 0

Query:   13 NDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEFQLLDISDDGFCSLLTEEGDTKDDLQLPTYPEGFGQEIKNQFEEGKTLCVTVMAAMGHEQIVTYKEES 166
            +DY F  TDAGAS T P EAGQI+K G+I+IKGHPCKVVNVSTSKTGKHGHAK NFTA DIFT KKLED++PSTHTTSVP V R E+ LLDIS+D F SL+ E GDT++D++LP+YP+GF  EI++ FE+GK L VTV+ A G EQI++ KE++
Sbjct:    3 DDYTFESTDAGASETYPMEAGQIKKNGFIMIKGHPCKVVNVSTSKTGKHGHAKCNFTALDIFTNKKLEDIVPSTHTTSVPFVSRKEYTLLDISEDDFVSLMDESGDTREDVKLPSYPDGFANEIRSDFEDGKQLVVTVLKACGTEQIISKKEDT 156

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BLAST of mRNA_H-paniculata_contig1438.2634.1 vs. uniprot
Match: M4B4L4_HYAAE (Eukaryotic translation initiation factor 5A n=18 Tax=Peronosporaceae TaxID=4777 RepID=M4B4L4_HYAAE)

HSP 1 Score: 220 bits (561), Expect = 4.330e-71
Identity = 106/160 (66.25%), Postives = 130/160 (81.25%), Query Frame = 0

Query:    6 MATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEFQLLDISDDGFCSLLTEEGDTKDDLQLPTYPEGFGQEIKNQFEEGKTLCVTVMAAMGHEQIVTYKEE 165
            MA E++  D+ F  TDAGAS T PSEAGQIRKGG+I+IKGHPCKVVN+STSKTGKHGHAK NFTA DIFT KK ED++PSTHTTSVP V R E+ LLDI+DD FCSL+ + GDT++D++LPT+PE FG+EI+  F +GK L +TV+ A G EQI+  KE+
Sbjct:    1 MAEEEQ--DFTFHSTDAGASETYPSEAGQIRKGGFIMIKGHPCKVVNMSTSKTGKHGHAKCNFTALDIFTNKKYEDIVPSTHTTSVPFVSRAEYTLLDITDDDFCSLMDDSGDTREDIKLPTFPETFGEEIRADFNDGKQLVLTVLKACGTEQIIAKKED 158

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BLAST of mRNA_H-paniculata_contig1438.2634.1 vs. uniprot
Match: A0A6A3TKK1_9STRA (Eukaryotic translation initiation factor 5A n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TKK1_9STRA)

HSP 1 Score: 218 bits (554), Expect = 9.420e-70
Identity = 105/163 (64.42%), Postives = 131/163 (80.37%), Query Frame = 0

Query:    5 TMATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEFQLLDISDDGFCSLLTEEGDTKDDLQLPTYPEGFGQEIKNQFEEGKTLCVTVMAAMGHEQIVTYKEESG 167
            TMA E + +D++F  TDAGAS T PSEAGQIRKGG+I+IKGHPCKVVNVSTSKTGKHGHAK NFTA DIFT KK ED++PSTHTTSVP V R E+ LLDI+DD F SL+ + G+T++D++LPT+PE F  EI+  F++GK L +TV+ A G EQ++  KE+ G
Sbjct:   17 TMA-EHEEHDFEFHSTDAGASETYPSEAGQIRKGGFIMIKGHPCKVVNVSTSKTGKHGHAKCNFTALDIFTNKKYEDIVPSTHTTSVPFVSRAEYTLLDITDDDFVSLMDDSGETREDIKLPTFPETFADEIRADFDDGKQLVLTVLKACGTEQVIAKKEDLG 178

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BLAST of mRNA_H-paniculata_contig1438.2634.1 vs. uniprot
Match: A0A5D6XTX1_9STRA (Eukaryotic translation initiation factor 5A n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTX1_9STRA)

HSP 1 Score: 215 bits (548), Expect = 3.990e-69
Identity = 103/153 (67.32%), Postives = 124/153 (81.05%), Query Frame = 0

Query:   14 DYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEFQLLDISDDGFCSLLTEEGDTKDDLQLPTYPEGFGQEIKNQFEEGKTLCVTVMAAMGHEQIVTYKEES 166
            DY F  TDAGAS T P EAGQIRKGG+I+IKGHPCKVV+VSTSKTGKHGHAK NFTA DIFT KKLED++PSTHTTSVP V R E+ LLDISDD F +L+ + GDT+DD++LPT+P+ F  EI+  F+ GK L VTV+ A G EQI++ KE++
Sbjct:    5 DYTFESTDAGASDTYPCEAGQIRKGGFIMIKGHPCKVVSVSTSKTGKHGHAKCNFTALDIFTNKKLEDIVPSTHTTSVPFVARAEYTLLDISDDDFVTLMDDGGDTRDDIKLPTFPDNFADEIRADFDSGKQLVVTVLKACGIEQIISKKEDT 157

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BLAST of mRNA_H-paniculata_contig1438.2634.1 vs. uniprot
Match: K3WUI8_GLOUD (Eukaryotic translation initiation factor 5A n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUI8_GLOUD)

HSP 1 Score: 214 bits (545), Expect = 1.140e-68
Identity = 99/154 (64.29%), Postives = 127/154 (82.47%), Query Frame = 0

Query:   13 NDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKVVNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEFQLLDISDDGFCSLLTEEGDTKDDLQLPTYPEGFGQEIKNQFEEGKTLCVTVMAAMGHEQIVTYKEES 166
            +DY F  TDAGAS T P EAGQIRKGG+I+IKGHPCKVV+VSTSKTGKHGHAK NFTA DIFT KKLED++PSTHTTSVP V R+E+ LLDI+DD F SL+ + G+T++D++LPT+P+ F +EI+  F+ GK L +TV+ A G EQ+++ KE++
Sbjct:    3 DDYTFESTDAGASDTFPCEAGQIRKGGFIMIKGHPCKVVSVSTSKTGKHGHAKCNFTALDIFTNKKLEDIVPSTHTTSVPFVSRSEYTLLDITDDDFLSLMDDSGETREDIKLPTFPDNFAEEIRADFDAGKQLVLTVLKACGTEQVISKKEDT 156

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig1438.2634.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig1438.2634.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LBS0_ECTSI	1.200e-109	94.55	eIF-5a domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A6H5KDL5_9PHAE	3.860e-109	95.18	eIF-5a domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A835Z7R2_9STRA	7.520e-83	71.17	Eukaryotic translation initiation factor 5A n=2 Ta...	[more]
A0A7S2UU65_9STRA	8.700e-74	69.87	Eukaryotic translation initiation factor 5A n=1 Ta...	[more]
W7U6Y6_9STRA	1.970e-72	66.87	Eukaryotic translation initiation factor 5A n=2 Ta...	[more]
A0A8K1CGM3_PYTOL	2.950e-71	67.53	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
M4B4L4_HYAAE	4.330e-71	66.25	Eukaryotic translation initiation factor 5A n=18 T...	[more]
A0A6A3TKK1_9STRA	9.420e-70	64.42	Eukaryotic translation initiation factor 5A n=3 Ta...	[more]
A0A5D6XTX1_9STRA	3.990e-69	67.32	Eukaryotic translation initiation factor 5A n=1 Ta...	[more]
K3WUI8_GLOUD	1.140e-68	64.29	Eukaryotic translation initiation factor 5A n=1 Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020189	Translation elongation factor, IF5A C-terminal	SMART	SM01376	eIF_5a_2	coord: 93..163 e-value: 5.9E-32 score: 122.2
IPR020189	Translation elongation factor, IF5A C-terminal	PFAM	PF01287	eIF-5a	coord: 93..163 e-value: 1.3E-26 score: 92.5
None	No IPR available	GENE3D	2.40.50.140		coord: 94..167 e-value: 1.1E-27 score: 97.9
None	No IPR available	PANTHER	PTHR11673:SF32	EUKARYOTIC TRANSLATION INITIATION FACTOR 5A-2	coord: 17..167
IPR001884	Translation elongation factor IF5A-like	PIRSF	PIRSF003025	Transl_init_eIF5A	coord: 6..167 e-value: 3.5E-60 score: 200.0
IPR001884	Translation elongation factor IF5A-like	TIGRFAM	TIGR00037	TIGR00037	coord: 27..161 e-value: 3.6E-39 score: 131.5
IPR001884	Translation elongation factor IF5A-like	PANTHER	PTHR11673	TRANSLATION INITIATION FACTOR 5A-RELATED	coord: 17..167
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 9..93 e-value: 8.1E-36 score: 123.7
IPR013185	Translation elongation factor, KOW-like	PFAM	PF08207	EFP_N	coord: 32..85 e-value: 2.5E-5 score: 24.2
IPR019769	Translation elongation factor, IF5A, hypusine site	PROSITE	PS00302	IF5A_HYPUSINE	coord: 58..65
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 94..164
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 23..101

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig1438	contig	H-paniculata_contig1438:23693..26153 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig1438.2634.1	mRNA_H-paniculata_contig1438.2634.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig1438 23693..26153 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig1438.2634.1 ID=prot_H-paniculata_contig1438.2634.1|Name=mRNA_H-paniculata_contig1438.2634.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=168bp
MSRKTMATEDKLNDYDFTGTDAGASHTIPSEAGQIRKGGYIVIKGHPCKV
VNVSTSKTGKHGHAKANFTATDIFTGKKLEDVIPSTHTTSVPVVRRNEFQ
LLDISDDGFCSLLTEEGDTKDDLQLPTYPEGFGQEIKNQFEEGKTLCVTV
MAAMGHEQIVTYKEESG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR020189	Transl_elong_IF5A_C
IPR001884	IF5A-like
IPR014722	Rib_L2_dom2
IPR013185	Transl_elong_KOW-like
IPR019769	Trans_elong_IF5A_hypusine_site
IPR012340	NA-bd_OB-fold
IPR008991	Translation_prot_SH3-like_sf