prot_H-paniculata_contig1438.2633.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1438.2633.1
Unique Nameprot_H-paniculata_contig1438.2633.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length203
Homology
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BLAST of mRNA_H-paniculata_contig1438.2633.1 vs. uniprot
Match: D8LBS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS1_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 5.950e-29
Identity = 77/195 (39.49%), Postives = 86/195 (44.10%), Query Frame = 0 
Query:    7 DEEYSEMAWAIAARGKSGREIGFLHETWANAQTARGVLDKAQQEHLDKALEIWERYDDLSLVARTWCLKGSCSVESNDFMTAADSFKRAQKVAEEVDDVPLVLCAMANRTICEIRRGEAKAAATHARRVFVKAADEANAEAIMVSHCVRAASYQMGGNFSAACNEHEAAAKMISKGTVKSPDPDLLLAMDTNFGI 201
            D E S MAW  A RGKSGREI  LH++WA A  ARG  +KAQ EHLD ALE W  YD+  L AR WCLK SCS E+ D                                                                     +RA SYQM GNF AACNEHEAAAK+  +  V    P   L M+TNFGI
Sbjct:   12 DGELSAMAWESAIRGKSGREIAHLHQSWAAAFLARGSFNKAQ-EHLDHALEAWTGYDEPGLQARAWCLKASCSGEAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRAMSYQMTGNFLAACNEHEAAAKLAEQRQVHPLAPAFALGMETNFGI 205
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1438.2633.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBS1_ECTSI5.950e-2939.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..198
e-value: 1.2E-13
score: 52.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 25..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1438contigH-paniculata_contig1438:16949..18939 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1438.2633.1mRNA_H-paniculata_contig1438.2633.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1438 16949..18939 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1438.2633.1 ID=prot_H-paniculata_contig1438.2633.1|Name=mRNA_H-paniculata_contig1438.2633.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=203bp
MDDGRKDEEYSEMAWAIAARGKSGREIGFLHETWANAQTARGVLDKAQQE
HLDKALEIWERYDDLSLVARTWCLKGSCSVESNDFMTAADSFKRAQKVAE
EVDDVPLVLCAMANRTICEIRRGEAKAAATHARRVFVKAADEANAEAIMV
SHCVRAASYQMGGNFSAACNEHEAAAKMISKGTVKSPDPDLLLAMDTNFG
IW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf