prot_H-paniculata_contig14315.2607.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14315.2607.1
Unique Nameprot_H-paniculata_contig14315.2607.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length128
Homology
BLAST of mRNA_H-paniculata_contig14315.2607.1 vs. uniprot
Match: A0A6H5JN95_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN95_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 4.590e-16
Identity = 50/132 (37.88%), Postives = 72/132 (54.55%), Query Frame = 0
Query:    1 MSSANPTKTPGTKTGQSTASNNDSLLDAAVTTEYQAMVGSLIFLTQFTRFDICFSVIQAARFMSAPTQQHLAAVKRTLRYLRGYSDISITYSRSKLELVGYSDASYCT-----MSTTGTMFFSANELVHFAS 127
            M  ANP  TPG     ST      LL       +QA+ GSL++LTQ TR+D+ ++V Q  R  + P Q H+AA K  LRYLRG  D+ I Y + +  L  ++ +S+ T      STTG +FF    L+++ +
Sbjct:  377 MEQANPVSTPGYGAELSTEQPQVQLLGPEDKQRFQAITGSLLYLTQCTRYDLSYAVHQLTRARANPAQVHMAAPKHLLRYLRGTPDLPIVYKKVQFRLSCFTSSSFGTNPDNGRSTTGYLFFLGGGLINYGA 508          
BLAST of mRNA_H-paniculata_contig14315.2607.1 vs. uniprot
Match: A0A1X7U3D2_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U3D2_AMPQE)

HSP 1 Score: 76.6 bits (187), Expect = 2.350e-14
Identity = 44/92 (47.83%), Postives = 60/92 (65.22%), Query Frame = 0
Query:   32 TEYQAMVGSLIFLTQFTRFDICFSVIQAARFMSAPTQQHLAAVKRTLRYLRGYSDISITYSRS-KLELVGYSDASY------CTMSTTGTMF 116
            TEYQ++VGSL++L+  TR DI ++V   ARF S PT QH+ AVKR LRYLRG +   + Y R    +L+GYSD+ +      C  ST+G +F
Sbjct:   30 TEYQSLVGSLLYLSMRTRPDITYAVSVTARFCSNPTTQHMTAVKRILRYLRGTTHYGLLYKRGGSKDLIGYSDSDWGGDRNDCK-STSGFLF 120          
BLAST of mRNA_H-paniculata_contig14315.2607.1 vs. uniprot
Match: A0A392M4C3_9FABA (Uncharacterized protein n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392M4C3_9FABA)

HSP 1 Score: 76.6 bits (187), Expect = 2.450e-14
Identity = 46/105 (43.81%), Postives = 62/105 (59.05%), Query Frame = 0
Query:   34 YQAMVGSLIFLTQFTRFDICFSVIQAARFMSAPTQQHLAAVKRTLRYLRGYSDISITYSRSK------LELVGYSDASYC-----TMSTTGTMFFSANELVHFAS 127
            Y+ +VGSL++L   TR D+ FSV   ARFM  PT+ H+AA+KR LRYLRG     I Y RSK      L+L G++D+ Y        ST+G +F   N  V ++S
Sbjct:   31 YKQIVGSLMYLLA-TRLDLAFSVCLVARFMERPTEMHIAAIKRILRYLRGTVGFGIMYKRSKKKSIAELKLQGWTDSDYAGDLDDRKSTSGYVFMLGNAAVSWSS 134          
BLAST of mRNA_H-paniculata_contig14315.2607.1 vs. uniprot
Match: UPI000DF4E519 (uncharacterized protein LOC112880905 n=1 Tax=Panicum hallii TaxID=206008 RepID=UPI000DF4E519)

HSP 1 Score: 76.3 bits (186), Expect = 8.580e-14
Identity = 44/102 (43.14%), Postives = 62/102 (60.78%), Query Frame = 0
Query:   32 TEYQAMVGSLIFLTQFTRFDICFSVIQAARFMSAPTQQHLAAVKRTLRYLRGYSDISITYSRSK-LELVGYSDASYC-----TMSTTGTMFFSANELVHFAS 127
            T Y++MVGSL +L   TR D+ FSV   +RFM  PT +HLAA+K+ LRY+ G  D    Y+R K  +LVG+SD+ +        STTG +FF    ++ + S
Sbjct:  138 TAYRSMVGSLRYLVN-TRPDLAFSVGYVSRFMEKPTTEHLAAMKKVLRYVAGTLDYGCVYTREKEAQLVGFSDSDHAGDVDTRKSTTGVLFFHGKNIITWQS 238          
BLAST of mRNA_H-paniculata_contig14315.2607.1 vs. uniprot
Match: UPI0019D69CA8 (secreted RxLR effector protein 161-like n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D69CA8)

HSP 1 Score: 74.3 bits (181), Expect = 1.310e-13
Identity = 45/103 (43.69%), Postives = 63/103 (61.17%), Query Frame = 0
Query:   32 TEYQAMVGSLIFLTQFTRFDICFSVIQAARFMSAPTQQHLAAVKRTLRYLRGYSDISITYSRS--KLELVGYSDASYC-----TMSTTGTMFFSANELVHFAS 127
            TEY+ +VGSL +L   TR DI +SV   +RF+ +PT +HLA VKR LRY+ G  D    Y ++  +L+L+GYSDA          STTG +F+  + LV + S
Sbjct:   29 TEYRGIVGSLRYLVH-TRPDISYSVGYVSRFIESPTAEHLAVVKRILRYIAGTIDYGCHYKKTGAELKLLGYSDADMAGDIDTRKSTTGVLFYYGSSLVSWQS 130          
BLAST of mRNA_H-paniculata_contig14315.2607.1 vs. uniprot
Match: A0A2K3KPJ1_TRIPR (Uncharacterized protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3KPJ1_TRIPR)

HSP 1 Score: 73.2 bits (178), Expect = 2.250e-13
Identity = 44/102 (43.14%), Postives = 63/102 (61.76%), Query Frame = 0
Query:   32 TEYQAMVGSLIFLTQFTRFDICFSVIQAARFMSAPTQQHLAAVKRTLRYLRGYSDISITYSRS-KLELVGYSDASYC-----TMSTTGTMFFSANELVHFAS 127
            T Y+ MVG L++L   TR D+ FSV   ARFM  PT+ H+AAVKR LRYL+G     + Y +  K EL+G+SD+ Y        ST+G +F   +++V ++S
Sbjct:   29 TNYKQMVGCLMYLLA-TRPDLAFSVCLVARFMERPTEIHVAAVKRILRYLKGTISYGLWYKKQEKDELIGWSDSDYAGDLDDRKSTSGYVFMVGSKVVSWSS 129          
BLAST of mRNA_H-paniculata_contig14315.2607.1 vs. uniprot
Match: A0A6H5J897_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J897_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 2.360e-13
Identity = 42/101 (41.58%), Postives = 60/101 (59.41%), Query Frame = 0
Query:   34 YQAMVGSLIFLTQFTRFDICFSVIQAARFMSAPTQQHLAAVKRTLRYLRGYSDISITYSRSKLELVGYSDASYC-------TMSTTGTMFFSANELVHFAS 127
            YQ +VGSL+FLT  TR++I ++V+   R M+ PT QH+   KR LRYLRG  D+ + + R + +L  Y DAS+          S+TG +F  A  +V  AS
Sbjct:  485 YQGIVGSLLFLTNTTRWEIGYAVMVLCRGMNKPTNQHMVGAKRVLRYLRGCPDMPLKFRRGQWDLKCYCDASFAGSSERLQKRSSTGYIFILAGGVVSAAS 585          
BLAST of mRNA_H-paniculata_contig14315.2607.1 vs. uniprot
Match: A0A177T584_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177T584_9BASI)

HSP 1 Score: 75.5 bits (184), Expect = 2.470e-13
Identity = 45/113 (39.82%), Postives = 65/113 (57.52%), Query Frame = 0
Query:    1 MSSANPTKTPGTKTGQSTASNNDSLLDAAVTTEYQAMVGSLIFLTQFTRFDICFSVIQAARFMSAPTQQHLAAVKRTLRYLRGYSDISITYSRSKL-ELVGYSDASYCTMSTT 112
            M +  P  TP  +  +S  +   S+  A     Y A+VG L++L Q TR DI F V + ARFM+ P+ +HLAA KR LRYL G  ++ + +  + L +LVGYSD+ +    TT
Sbjct:  960 MDNCKPASTPMAEASKSLGAREGSIASAKERQFYAALVGCLLWLAQGTRPDIAFQVGKLARFMANPSDEHLAAAKRVLRYLAGTRELGLRFRHTDLAQLVGYSDSDHGADPTT 1072          
BLAST of mRNA_H-paniculata_contig14315.2607.1 vs. uniprot
Match: UPI0018763992 (DDE-type integrase/transposase/recombinase n=2 Tax=Streptomyces plicatus TaxID=1922 RepID=UPI0018763992)

HSP 1 Score: 75.5 bits (184), Expect = 2.500e-13
Identity = 51/133 (38.35%), Postives = 73/133 (54.89%), Query Frame = 0
Query:    1 MSSANPTKTPGTKTGQSTASNNDSLLDAAVTTEYQAMVGSLIFLTQFTRFDICFSVIQAARFMSAPTQQHLAAVKRTLRYLRGYSDISITYSRSK-LELVGYSDASYC-----TMSTTGTMFFSANELVHFAS 127
            M  + P  TP      ST  + D    +   T Y++M+GSL++LT  TR DI  +V   ARF S+PT++HL AVKR  RYL+G  ++ + Y + K   LV YSDA +        ST+G  F+  + LV + S
Sbjct: 1359 MEDSKPVSTP---MSTSTKLSKDDKTSSVDHTTYRSMIGSLLYLTA-TRPDILQAVCMVARFQSSPTEEHLTAVKRIFRYLKGTMELGLCYPKGKSFTLVAYSDADWAGCIDDRKSTSGGAFYLGDRLVAWHS 1487          
BLAST of mRNA_H-paniculata_contig14315.2607.1 vs. uniprot
Match: C7J0V0_ORYSJ (Os04g0252300 protein (Fragment) n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=C7J0V0_ORYSJ)

HSP 1 Score: 74.7 bits (182), Expect = 3.080e-13
Identity = 53/134 (39.55%), Postives = 76/134 (56.72%), Query Frame = 0
Query:    1 MSSANPTKTPGTKTGQSTASNNDSLLDAAVTTEYQAMVGSLIFLTQFTRFDICFSVIQAARFMSAPTQQHLAAVKRTLRYLRGYSDISITYSRSK--LELVGYSDASYC-----TMSTTGTMFFSANELVHFAS 127
            MSS NP+ TP     + + S+    +DA   T+Y+ +VGSL +L   +R D+ F V   +RFM  PT +H+AAVKR LRY+ G ++    Y R K  + LVGYSD+          STTG +FF  + L+ + S
Sbjct:  132 MSSTNPSLTPMESRLKLSKSSAAPAVDA---TDYRRIVGSLRYLVN-SRSDLAFLVGYVSRFMEKPTTEHMAAVKRVLRYIAGTTNYGCQYRRKKDAVCLVGYSDSDLAGDVDSRKSTTGVLFFLGDNLITWQS 261          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14315.2607.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JN95_9PHAE4.590e-1637.88Integrase catalytic domain-containing protein n=1 ... [more]
A0A1X7U3D2_AMPQE2.350e-1447.83Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
A0A392M4C3_9FABA2.450e-1443.81Uncharacterized protein n=1 Tax=Trifolium medium T... [more]
UPI000DF4E5198.580e-1443.14uncharacterized protein LOC112880905 n=1 Tax=Panic... [more]
UPI0019D69CA81.310e-1343.69secreted RxLR effector protein 161-like n=1 Tax=Pa... [more]
A0A2K3KPJ1_TRIPR2.250e-1343.14Uncharacterized protein n=1 Tax=Trifolium pratense... [more]
A0A6H5J897_9PHAE2.360e-1341.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A177T584_9BASI2.470e-1339.82Integrase catalytic domain-containing protein n=1 ... [more]
UPI00187639922.500e-1338.35DDE-type integrase/transposase/recombinase n=2 Tax... [more]
C7J0V0_ORYSJ3.080e-1339.55Os04g0252300 protein (Fragment) n=1 Tax=Oryza sati... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 30..107
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 30..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14315contigH-paniculata_contig14315:847..1230 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14315.2607.1mRNA_H-paniculata_contig14315.2607.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14315 59..1572 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14315.2607.1 ID=prot_H-paniculata_contig14315.2607.1|Name=mRNA_H-paniculata_contig14315.2607.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=128bp
MSSANPTKTPGTKTGQSTASNNDSLLDAAVTTEYQAMVGSLIFLTQFTRF
DICFSVIQAARFMSAPTQQHLAAVKRTLRYLRGYSDISITYSRSKLELVG
YSDASYCTMSTTGTMFFSANELVHFAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like