Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | mitochondrion |
| Exons | 3 |
| Model size | 1769 |
| Cds size | 1275 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14292.2597.1 >prot_H-paniculata_contig14292.2597.1 ID=prot_H-paniculata_contig14292.2597.1|Name=mRNA_H-paniculata_contig14292.2597.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=425bp
MKALGILQKHRLTSTAAAVKAGTHGGQRVKGATAATPVGAMAEAAGGKRL
RTETRMPQQQQQQQQQDVVLETPKKRIPQQKAPIADCNNPLPLHPKASSW
PKALTADVRVTAAAATVVMTDVDEGAAEGVGGESQRPRAEAGQGRVCAGS
SEILEIGNAVAVPKKKTKPSSDDGDDGCIDSRLIVVPATSVTEDGMATGT
AMAMATASDVATAGTADLAQEGSCIFSSSSNSSCSSRDSARGRSAGNDIS
CMVGTTGREQAGGDGPSASTSIECNRQTEPTSCGGTVDDGPGDIVSATAG
EAQATIVTKKIVSSGGSTGQRVPTATDASIAAGAIVSAACVPLEGGGVGA
IDGRGGDQCGGLGGERECDNFVQAGTGLATDSADTGGGGGGGSDGGMGGL
LSQSSRVSPVLSAGVAGAGLMTGT* back to topmRNA from alignment at H-paniculata_contig14292:2452..4796- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig14292.2597.1 ID=mRNA_H-paniculata_contig14292.2597.1|Name=mRNA_H-paniculata_contig14292.2597.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2345bp|location=Sequence derived from alignment at H-paniculata_contig14292:2452..4796- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGCGGGTGGTGGAGGTGGAGGTGGGAAGGGTGGTGCAGGCGGCACCGTGG
CGGGAGCGGCGGCGGCGAAAGCGACGCAAATGAAGGCTCTGGGGATATTG
CAGAAGCACAGGTAGAGTGTTGTTGTTGTTGTTTTAGAGGAATGAAAATT
CTAAATATTGGCTCTGTTTTGAGTGTGTGTGTTTCTTGCTTTTTCATTTG
CCTCTAAACGTGGTATTTGATCCACCCGTCACCCCGCCTGTGGTTAACGT
GCTTGCTCATTAGTACATAATGACATCGTTACGGACGAAAGCGTCGCTAC
GTCGTACGGTGCAGCATACCACAGCGTAATTCTTGCTACTTCTCGTTATT
TAGAGACGGCATAGTACAGCAGTAACGTCCATTCTGAACTTCACTGACTA
TATTTGGTGTATGCGTACTGTTTGTGGATAATAACCAAGTAATCCAGCAG
CTTGAAGATGTTGAGCATACGTGCAGTTAGTATTTTAGGGTTATTGCCAT
ACTGTTTTCTACACTGGGCAGGAACTAGTACAGTATGTGTCACTACTTTG
ACGTGCCCTTTATTCCCACGATATTTTTTCCTAACCACATCCCCCCCCCC
CCCCCCGACACACACACACACACACACATTCCTCCCGTCCAAACAGGCTT
ACGTCAACCGCAGCAGCCGTGAAAGCAGGGACGCACGGAGGCCAACGGGT
GAAGGGAGCGACGGCAGCTACACCGGTAGGGGCAATGGCAGAAGCTGCGG
GGGGCAAGCGGCTTCGGACGGAGACAAGAATGCCACAACAGCAGCAGCAA
CAACAACAACAAGATGTAGTCCTCGAGACACCGAAAAAGAGAATACCGCA
GCAAAAGGCGCCGATTGCAGATTGCAACAACCCTCTTCCTCTCCACCCCA
AAGCTTCCAGCTGGCCGAAAGCTTTGACGGCGGACGTTCGGGTTACTGCT
GCTGCTGCTACCGTTGTGATGACAGATGTAGACGAAGGAGCAGCAGAGGG
GGTAGGAGGGGAGTCGCAGCGGCCCAGGGCAGAGGCGGGTCAGGGGCGGG
TCTGCGCTGGTAGTAGCGAGATACTGGAGATTGGGAACGCCGTGGCAGTC
CCCAAGAAAAAGACGAAACCATCATCGGACGATGGTGATGACGGTTGTAT
CGACTCTCGGTTAATCGTAGTACCAGCAACGAGCGTGACTGAGGATGGCA
TGGCGACGGGGACAGCAATGGCGATGGCGACGGCAAGTGACGTCGCCACC
GCTGGTACTGCGGACTTGGCACAGGAGGGAAGTTGTATTTTTAGTAGTAG
TAGTAATAGTAGCTGTAGTAGTAGGGATAGTGCTAGGGGTCGAAGTGCAG
GGAACGACATTTCGTGTATGGTCGGGACGACGGGTCGTGAGCAAGCCGGC
GGTGATGGTCCTTCTGCTTCCACTTCAATAGAGTGCAACCGGCAAACTGA
ACCCACTTCTTGTGGTGGAACAGTCGACGACGGCCCTGGTGATATCGTTT
CTGCTACCGCTGGTGAAGCGCAAGCGACAATTGTGACGAAGAAAATTGTT
AGCAGTGGTGGTAGCACTGGCCAGCGTGTCCCCACCGCGACCGATGCTAG
CATCGCTGCTGGTGCTATTGTTTCTGCTGCTTGTGTTCCTTTGGAGGGTG
GTGGGGTTGGCGCTATTGATGGTCGTGGCGGTGATCAGTGCGGGGGGCTC
GGGGGGGAACGCGAATGCGATAATTTTGTGCAAGCGGGTACGGGGCTTGC
TACGGATAGCGCGGACACCGGTGGCGGTGGCGGCGGTGGTAGCGATGGCG
GCATGGGAGGACTATTGTCGCAGAGTAGCAGGGTGTCTCCTGTATTGTCG
GCTGGTGTTGCGGGGGCAGGGTTGATGACGGGCACCTAGGATAGGACACG
TGTGAATGGATCATCAGATCTTTTTCCTTTGTCGTTACGAACATACGAGA
AAATTTCACAGCAGGGAACGGATGAAGTGCATTATTCGACAATATTTGTA
TGCATGCTCACTCTTCAGTGCAATCACTCGCTCGCCCGGCTTGACCCAGC
TCGCGACGAGTGCAGTGTGCGGTTGGCACCTCGCAGTCAGGCGTTGGGTT
GGCAGATGGATTCATGGTGTATTCGGAAAAAAGTGATATTATTTGCGACA
TGTTTCAGCTTGTACATGATTTCATTCCGCCACGGGTGGAGAAATTTATG
AGGGATCGGCGCACTTGATTGTATATTATTCATATTTAGATGCCCGTGTT
TGCCGGCGCCTTTTATGTCAAGCCTCAGTATCGCTAGATTTTCAACGGAC
AAGTAGTCGGCTATGACCGACTATAATACTAGGTTTCATGACGGC back to topCoding sequence (CDS) from alignment at H-paniculata_contig14292:2452..4796- >mRNA_H-paniculata_contig14292.2597.1 ID=mRNA_H-paniculata_contig14292.2597.1|Name=mRNA_H-paniculata_contig14292.2597.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2550bp|location=Sequence derived from alignment at H-paniculata_contig14292:2452..4796- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGGCTCTGGGGATATTGCAGAAGCACAGATGAAGGCTCTGGGGATA
TTGCAGAAGCACAGGCTTACGTCAACCGCAGCAGCCGTGAAAGCAGGGAC
GCACGGAGGCCAACGGGTGAAGGGAGCGACGGCAGCTACACCGGTAGGGG
CAATGGCAGAAGCTGCGGGGGGCAAGCGGCTTCGGACGGAGACAAGAATG
CCACAACAGCAGCAGCAACAACAACAACAAGATGTAGTCCTCGAGACACC
GAAAAAGAGAATACCGCAGCAAAAGGCGCCGATTGCAGATTGCAACAACC
CTCTTCCTCTCCACCCCAAAGCTTCCAGCTGGCCGAAAGCTTTGACGGCG
GACGTTCGGGTTACTGCTGCTGCTGCTACCGTTGTGATGACAGATGTAGA
CGAAGGAGCAGCAGAGGGGGTAGGAGGGGAGTCGCAGCGGCCCAGGGCAG
AGGCGGGTCAGGGGCGGGTCTGCGCTGGTAGTAGCGAGATACTGGAGATT
GGGAACGCCGTGGCAGTCCCCAAGAAAAAGACGAAACCATCATCGGACGA
TGGTGATGACGGTTGTATCGACTCTCGGTTAATCGTAGTACCAGCAACGA
GCGTGACTGAGGATGGCATGGCGACGGGGACAGCAATGGCGATGGCGACG
GCAAGTGACGTCGCCACCGCTGGTACTGCGGACTTGGCACAGGAGGGAAG
TTGTATTTTTAGTAGTAGTAGTAATAGTAGCTGTAGTAGTAGGGATAGTG
CTAGGGGTCGAAGTGCAGGGAACGACATTTCGTGTATGGTCGGGACGACG
GGTCGTGAGCAAGCCGGCGGTGATGGTCCTTCTGCTTCCACTTCAATAGA
GTGCAACCGGCAAACTGAACCCACTTCTTGTGGTGGAACAGTCGACGACG
GCCCTGGTGATATCGTTTCTGCTACCGCTGGTGAAGCGCAAGCGACAATT
GTGACGAAGAAAATTGTTAGCAGTGGTGGTAGCACTGGCCAGCGTGTCCC
CACCGCGACCGATGCTAGCATCGCTGCTGGTGCTATTGTTTCTGCTGCTT
GTGTTCCTTTGGAGGGTGGTGGGGTTGGCGCTATTGATGGTCGTGGCGGT
GATCAGTGCGGGGGGCTCGGGGGGGAACGCGAATGCGATAATTTTGTGCA
AGCGGGTACGGGGCTTGCTACGGATAGCGCGGACACCGGTGGCGGTGGCG
GCGGTGGTAGCGATGGCGGCATGGGAGGACTATTGTCGCAGAGTAGCAGG
GTGTCTCCTGTATTGTCGGCTGGTGTTGCGGGGGCAGGGTTGATGACGGG
CACCTAGGCTTACGTCAACCGCAGCAGCCGTGAAAGCAGGGACGCACGGA
GGCCAACGGGTGAAGGGAGCGACGGCAGCTACACCGGTAGGGGCAATGGC
AGAAGCTGCGGGGGGCAAGCGGCTTCGGACGGAGACAAGAATGCCACAAC
AGCAGCAGCAACAACAACAACAAGATGTAGTCCTCGAGACACCGAAAAAG
AGAATACCGCAGCAAAAGGCGCCGATTGCAGATTGCAACAACCCTCTTCC
TCTCCACCCCAAAGCTTCCAGCTGGCCGAAAGCTTTGACGGCGGACGTTC
GGGTTACTGCTGCTGCTGCTACCGTTGTGATGACAGATGTAGACGAAGGA
GCAGCAGAGGGGGTAGGAGGGGAGTCGCAGCGGCCCAGGGCAGAGGCGGG
TCAGGGGCGGGTCTGCGCTGGTAGTAGCGAGATACTGGAGATTGGGAACG
CCGTGGCAGTCCCCAAGAAAAAGACGAAACCATCATCGGACGATGGTGAT
GACGGTTGTATCGACTCTCGGTTAATCGTAGTACCAGCAACGAGCGTGAC
TGAGGATGGCATGGCGACGGGGACAGCAATGGCGATGGCGACGGCAAGTG
ACGTCGCCACCGCTGGTACTGCGGACTTGGCACAGGAGGGAAGTTGTATT
TTTAGTAGTAGTAGTAATAGTAGCTGTAGTAGTAGGGATAGTGCTAGGGG
TCGAAGTGCAGGGAACGACATTTCGTGTATGGTCGGGACGACGGGTCGTG
AGCAAGCCGGCGGTGATGGTCCTTCTGCTTCCACTTCAATAGAGTGCAAC
CGGCAAACTGAACCCACTTCTTGTGGTGGAACAGTCGACGACGGCCCTGG
TGATATCGTTTCTGCTACCGCTGGTGAAGCGCAAGCGACAATTGTGACGA
AGAAAATTGTTAGCAGTGGTGGTAGCACTGGCCAGCGTGTCCCCACCGCG
ACCGATGCTAGCATCGCTGCTGGTGCTATTGTTTCTGCTGCTTGTGTTCC
TTTGGAGGGTGGTGGGGTTGGCGCTATTGATGGTCGTGGCGGTGATCAGT
GCGGGGGGCTCGGGGGGGAACGCGAATGCGATAATTTTGTGCAAGCGGGT
ACGGGGCTTGCTACGGATAGCGCGGACACCGGTGGCGGTGGCGGCGGTGG
TAGCGATGGCGGCATGGGAGGACTATTGTCGCAGAGTAGCAGGGTGTCTC
CTGTATTGTCGGCTGGTGTTGCGGGGGCAGGGTTGATGACGGGCACCTAG back to top
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