prot_H-paniculata_contig14265.2586.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14265.2586.1
Unique Nameprot_H-paniculata_contig14265.2586.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length115
Homology
BLAST of mRNA_H-paniculata_contig14265.2586.1 vs. uniprot
Match: D7FS52_ECTSI (Geranylgeranyl pyrophosphate synthetase, chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS52_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 3.640e-59
Identity = 95/110 (86.36%), Postives = 101/110 (91.82%), Query Frame = 0
Query:    6 QVMDMECEGKSGVGLDELRWIHRHKTAALLKVACTAGALLGGASEKDVKNMELFSESVGLAFQVADDILDCTQTSEQLGKTAGKDMAAGKTTYPKLMGMEGAKKEARRQV 115
            QVMD+ECE K  VGL+ELRWIHRHKT ALLKVACTAGALLGGAS+KDVKNME+FSES+GLAFQVADDILDCT TSEQLGKTAGKD A  KTTYPKLMGM+GAKKEARR V
Sbjct:    5 QVMDLECEDKD-VGLEELRWIHRHKTGALLKVACTAGALLGGASDKDVKNMEVFSESIGLAFQVADDILDCTATSEQLGKTAGKDEAVNKTTYPKLMGMDGAKKEARRLV 113          
BLAST of mRNA_H-paniculata_contig14265.2586.1 vs. uniprot
Match: H6WB80_VAULI (Farnesyltransferase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB80_VAULI)

HSP 1 Score: 160 bits (406), Expect = 3.850e-46
Identity = 79/112 (70.54%), Postives = 92/112 (82.14%), Query Frame = 0
Query:    4 GRQVMDMECEGKSGVGLDELRWIHRHKTAALLKVACTAGALLGGASEKDVKNMELFSESVGLAFQVADDILDCTQTSEQLGKTAGKDMAAGKTTYPKLMGMEGAKKEARRQV 115
            G Q MD+E EGK    L++LRWIH+HKT ALLK ACT GA+LGGA   +V+ +E FSES+GLAFQVADDILDCTQTSEQLGKTAGKD A  KTTY KL+GM+GA+KEA+R V
Sbjct:  209 GGQAMDLELEGKEDTTLEQLRWIHKHKTGALLKAACTTGAVLGGAEPSEVEAIERFSESIGLAFQVADDILDCTQTSEQLGKTAGKDEAVSKTTYVKLLGMDGARKEAKRLV 320          
BLAST of mRNA_H-paniculata_contig14265.2586.1 vs. uniprot
Match: A0A835ZD72_9STRA (Farnesyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD72_9STRA)

HSP 1 Score: 159 bits (401), Expect = 6.320e-46
Identity = 80/112 (71.43%), Postives = 91/112 (81.25%), Query Frame = 0
Query:    4 GRQVMDMECEGKSGVGLDELRWIHRHKTAALLKVACTAGALLGGASEKDVKNMELFSESVGLAFQVADDILDCTQTSEQLGKTAGKDMAAGKTTYPKLMGMEGAKKEARRQV 115
            G Q MD+E EG+    L++LRWIHRHKT ALL VA  AGA+LGGAS KDV  ME FS+++GLAFQVADDILDCTQT+EQLGKTAGKD A  KTTY KLMGM+GA+ EARR V
Sbjct:  159 GGQAMDLELEGRDDTTLEDLRWIHRHKTGALLNVAVCAGAILGGASPKDVAAMETFSDAIGLAFQVADDILDCTQTTEQLGKTAGKDEAVSKTTYVKLMGMDGARAEARRLV 270          
BLAST of mRNA_H-paniculata_contig14265.2586.1 vs. uniprot
Match: A0A7S1XUM3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUM3_9STRA)

HSP 1 Score: 157 bits (398), Expect = 4.350e-45
Identity = 77/110 (70.00%), Postives = 92/110 (83.64%), Query Frame = 0
Query:    4 GRQVMDMECEGKSGVGLDELRWIHRHKTAALLKVACTAGALLGGASEKDVKNMELFSESVGLAFQVADDILDCTQTSEQLGKTAGKDMAAGKTTYPKLMGMEGAKKEARR 113
            G QVMD+ECEGK GVGLD+LRWIH +KTAALLK     GA L GAS+ DVKNME++++S+GLAFQVADDILD T ++E+LGKTAGKD    KTTYPKLMG++GA+ EARR
Sbjct:  203 GGQVMDLECEGKEGVGLDDLRWIHTYKTAALLKCCVQCGAKLAGASDADVKNMEVYADSIGLAFQVADDILDVTASTEELGKTAGKDEDTDKTTYPKLMGLDGARAEARR 312          
BLAST of mRNA_H-paniculata_contig14265.2586.1 vs. uniprot
Match: A0A7S2V1Y7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Y7_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.020e-44
Identity = 76/114 (66.67%), Postives = 92/114 (80.70%), Query Frame = 0
Query:    2 VGGRQVMDMECEGKSGVGLDELRWIHRHKTAALLKVACTAGALLGGASEKDVKNMELFSESVGLAFQVADDILDCTQTSEQLGKTAGKDMAAGKTTYPKLMGMEGAKKEARRQV 115
            + G QVMD+ CE K GV L++L WIH HKTAALLKVA   GA++GGAS++DV   E F+E +GLAFQVADDILD T TSE+LGKTAGKD+   KTTYPKL+G+EG+KKEARR +
Sbjct:  118 IAGGQVMDLICEDKPGVTLEDLTWIHTHKTAALLKVAVACGAIIGGASDEDVALCETFAEDIGLAFQVADDILDVTATSEELGKTAGKDVDVNKTTYPKLLGLEGSKKEARRLI 231          
BLAST of mRNA_H-paniculata_contig14265.2586.1 vs. uniprot
Match: A0A7S2RH45_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RH45_9STRA)

HSP 1 Score: 154 bits (388), Expect = 1.560e-43
Identity = 75/112 (66.96%), Postives = 94/112 (83.93%), Query Frame = 0
Query:    4 GRQVMDMECEGKSGVGLDELRWIHRHKTAALLKVACTAGALLGGASEKDVKNMELFSESVGLAFQVADDILDCTQTSEQLGKTAGKDMAAGKTTYPKLMGMEGAKKEARRQV 115
            G QVMD+ECEGK GV LDELRWIH HKTAALL+V+   GA+L GA++++VK  E ++  VGLAFQVADDILD TQ++E+LGKTAGKD+ A KTTYPKLMG++G++ EA+R V
Sbjct:  201 GGQVMDLECEGKEGVTLDELRWIHTHKTAALLQVSVATGAILAGATDEEVKACETYALDVGLAFQVADDILDVTQSTEELGKTAGKDLDADKTTYPKLMGLDGSRAEAKRLV 312          
BLAST of mRNA_H-paniculata_contig14265.2586.1 vs. uniprot
Match: W7U7B5_9STRA (Geranylgeranyl pyrophosphate synthase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U7B5_9STRA)

HSP 1 Score: 153 bits (386), Expect = 8.150e-43
Identity = 75/112 (66.96%), Postives = 93/112 (83.04%), Query Frame = 0
Query:    4 GRQVMDMECEGKSGVGLDELRWIHRHKTAALLKVACTAGALLGGASEKDVKNMELFSESVGLAFQVADDILDCTQTSEQLGKTAGKDMAAGKTTYPKLMGMEGAKKEARRQV 115
            G QVMD+ECEGK GVGL+EL WIH HKTAALLKV+  AGA+LGGAS ++V+  E ++  +GLAFQVADDILD T ++E LGKTAGKD+   KTTYPKL+G+EG+++EARR V
Sbjct:  245 GGQVMDLECEGKEGVGLEELTWIHTHKTAALLKVSVAAGAILGGASAEEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLV 356          
BLAST of mRNA_H-paniculata_contig14265.2586.1 vs. uniprot
Match: A0A6U5JU78_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5JU78_9STRA)

HSP 1 Score: 148 bits (374), Expect = 1.840e-41
Identity = 75/112 (66.96%), Postives = 90/112 (80.36%), Query Frame = 0
Query:    4 GRQVMDMECEGKSGVGLDELRWIHRHKTAALLKVACTAGALLGGASEKDVKNMELFSESVGLAFQVADDILDCTQTSEQLGKTAGKDMAAGKTTYPKLMGMEGAKKEARRQV 115
            G QVMD+ECE K GV L++L WIH HKTAALL+VA +AGA+LGGAS ++V+  E F+  +GLAFQVADDILD T  S+ LGKTAGKD A  KTTY KLMG+EG+KKEARR +
Sbjct:  199 GGQVMDLECEAKEGVTLEDLTWIHTHKTAALLQVAVSAGAILGGASPEEVERCEKFALDIGLAFQVADDILDVTADSQTLGKTAGKDEATDKTTYVKLMGLEGSKKEARRLI 310          
BLAST of mRNA_H-paniculata_contig14265.2586.1 vs. uniprot
Match: A0A7S2Y6Q7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y6Q7_9STRA)

HSP 1 Score: 148 bits (374), Expect = 1.880e-41
Identity = 73/112 (65.18%), Postives = 91/112 (81.25%), Query Frame = 0
Query:    4 GRQVMDMECEGKSGVGLDELRWIHRHKTAALLKVACTAGALLGGASEKDVKNMELFSESVGLAFQVADDILDCTQTSEQLGKTAGKDMAAGKTTYPKLMGMEGAKKEARRQV 115
            G QV D+ECEGK    LDELRWIH HKTA LL+VA  +GA++GGAS ++VK  E F+ ++GLAFQVADDILD TQ++E+LGKTAGKD+ A KTTYPKL+G++GA+ EA R V
Sbjct:  200 GGQVKDLECEGKGEATLDELRWIHTHKTATLLEVAVASGAIMGGASPEEVKACEQFALNIGLAFQVADDILDVTQSTEELGKTAGKDLDADKTTYPKLLGLDGARAEAERLV 311          
BLAST of mRNA_H-paniculata_contig14265.2586.1 vs. uniprot
Match: B7FU89_PHATC (Farnesyltranstransferase n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FU89_PHATC)

HSP 1 Score: 146 bits (369), Expect = 9.770e-41
Identity = 71/112 (63.39%), Postives = 91/112 (81.25%), Query Frame = 0
Query:    4 GRQVMDMECEGKSGVGLDELRWIHRHKTAALLKVACTAGALLGGASEKDVKNMELFSESVGLAFQVADDILDCTQTSEQLGKTAGKDMAAGKTTYPKLMGMEGAKKEARRQV 115
            G QVMD+ECEGK    L++LRWIH HKTA LL+VA  +GA++GGAS ++VK  E F+ ++GLAFQVADDILD TQ++E+LGKTAGKD    KTTYPKL+G++GA++EA R V
Sbjct:  197 GGQVMDLECEGKGSATLEDLRWIHTHKTATLLQVAVASGAIIGGASAEEVKACEQFALNIGLAFQVADDILDVTQSTEELGKTAGKDEDTDKTTYPKLLGLDGAREEAERLV 308          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14265.2586.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS52_ECTSI3.640e-5986.36Geranylgeranyl pyrophosphate synthetase, chloropla... [more]
H6WB80_VAULI3.850e-4670.54Farnesyltransferase n=1 Tax=Vaucheria litorea TaxI... [more]
A0A835ZD72_9STRA6.320e-4671.43Farnesyltransferase n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S1XUM3_9STRA4.350e-4570.00Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2V1Y7_9STRA1.020e-4466.67Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2RH45_9STRA1.560e-4366.96Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7U7B5_9STRA8.150e-4366.96Geranylgeranyl pyrophosphate synthase n=3 Tax=Mono... [more]
A0A6U5JU78_9STRA1.840e-4166.96Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2Y6Q7_9STRA1.880e-4165.18Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
B7FU89_PHATC9.770e-4163.39Farnesyltranstransferase n=3 Tax=Phaeodactylum tri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008949Isoprenoid synthase domain superfamilyGENE3D1.10.600.10coord: 1..115
e-value: 2.3E-37
score: 130.6
IPR008949Isoprenoid synthase domain superfamilySUPERFAMILY48576Terpenoid synthasescoord: 6..114
IPR000092Polyprenyl synthetasePFAMPF00348polyprenyl_syntcoord: 6..112
e-value: 4.5E-26
score: 91.5
NoneNo IPR availablePANTHERPTHR43281:SF13coord: 6..112
NoneNo IPR availablePANTHERPTHR43281FAMILY NOT NAMEDcoord: 6..112
IPR033749Polyprenyl synthetase, conserved sitePROSITEPS00444POLYPRENYL_SYNTHASE_2coord: 63..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14265contigH-paniculata_contig14265:115..6565 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14265.2586.1mRNA_H-paniculata_contig14265.2586.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14265 106..6565 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14265.2586.1 ID=prot_H-paniculata_contig14265.2586.1|Name=mRNA_H-paniculata_contig14265.2586.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=115bp
MVGGRQVMDMECEGKSGVGLDELRWIHRHKTAALLKVACTAGALLGGASE
KDVKNMELFSESVGLAFQVADDILDCTQTSEQLGKTAGKDMAAGKTTYPK
LMGMEGAKKEARRQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008949Isoprenoid_synthase_dom_sf
IPR000092Polyprenyl_synt
IPR033749Polyprenyl_synt_CS