mRNA_H-paniculata_contig14265.2586.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig14265.2586.1
Unique NamemRNA_H-paniculata_contig14265.2586.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig14265.2586.1 vs. uniprot
Match: D7FS52_ECTSI (Geranylgeranyl pyrophosphate synthetase, chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS52_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 4.120e-59
Identity = 95/110 (86.36%), Postives = 101/110 (91.82%), Query Frame = 1 
Query:   25 QVMDMECEGKSGVGLDELRWIHRHKTAALLKVACTAGALLGGASEKDVKNMELFSESVGLAFQVADDILDCTQTSEQLGKTAGKDMAAGKTTYPKLMGMEGAKKEARRQV 354
            QVMD+ECE K  VGL+ELRWIHRHKT ALLKVACTAGALLGGAS+KDVKNME+FSES+GLAFQVADDILDCT TSEQLGKTAGKD A  KTTYPKLMGM+GAKKEARR V
Sbjct:    5 QVMDLECEDKD-VGLEELRWIHRHKTGALLKVACTAGALLGGASDKDVKNMEVFSESIGLAFQVADDILDCTATSEQLGKTAGKDEAVNKTTYPKLMGMDGAKKEARRLV 113
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BLAST of mRNA_H-paniculata_contig14265.2586.1 vs. uniprot
Match: H6WB80_VAULI (Farnesyltransferase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB80_VAULI)

HSP 1 Score: 161 bits (408), Expect = 2.180e-46
Identity = 79/114 (69.30%), Postives = 93/114 (81.58%), Query Frame = 1 
Query:   13 VGGRQVMDMECEGKSGVGLDELRWIHRHKTAALLKVACTAGALLGGASEKDVKNMELFSESVGLAFQVADDILDCTQTSEQLGKTAGKDMAAGKTTYPKLMGMEGAKKEARRQV 354
            + G Q MD+E EGK    L++LRWIH+HKT ALLK ACT GA+LGGA   +V+ +E FSES+GLAFQVADDILDCTQTSEQLGKTAGKD A  KTTY KL+GM+GA+KEA+R V
Sbjct:  207 LAGGQAMDLELEGKEDTTLEQLRWIHKHKTGALLKAACTTGAVLGGAEPSEVEAIERFSESIGLAFQVADDILDCTQTSEQLGKTAGKDEAVSKTTYVKLLGMDGARKEAKRLV 320
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BLAST of mRNA_H-paniculata_contig14265.2586.1 vs. uniprot
Match: A0A7S1XUM3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUM3_9STRA)

HSP 1 Score: 161 bits (407), Expect = 2.200e-46
Identity = 80/116 (68.97%), Postives = 96/116 (82.76%), Query Frame = 1 
Query:    1 PLTMVGGRQVMDMECEGKSGVGLDELRWIHRHKTAALLKVACTAGALLGGASEKDVKNMELFSESVGLAFQVADDILDCTQTSEQLGKTAGKDMAAGKTTYPKLMGMEGAKKEARR 348
            PL + GG QVMD+ECEGK GVGLD+LRWIH +KTAALLK     GA L GAS+ DVKNME++++S+GLAFQVADDILD T ++E+LGKTAGKD    KTTYPKLMG++GA+ EARR
Sbjct:  198 PLGLAGG-QVMDLECEGKEGVGLDDLRWIHTYKTAALLKCCVQCGAKLAGASDADVKNMEVYADSIGLAFQVADDILDVTASTEELGKTAGKDEDTDKTTYPKLMGLDGARAEARR 312
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BLAST of mRNA_H-paniculata_contig14265.2586.1 vs. uniprot
Match: A0A835ZD72_9STRA (Farnesyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD72_9STRA)

HSP 1 Score: 159 bits (403), Expect = 3.560e-46
Identity = 82/117 (70.09%), Postives = 94/117 (80.34%), Query Frame = 1 
Query:    4 LTMVGGRQVMDMECEGKSGVGLDELRWIHRHKTAALLKVACTAGALLGGASEKDVKNMELFSESVGLAFQVADDILDCTQTSEQLGKTAGKDMAAGKTTYPKLMGMEGAKKEARRQV 354
            L + GG Q MD+E EG+    L++LRWIHRHKT ALL VA  AGA+LGGAS KDV  ME FS+++GLAFQVADDILDCTQT+EQLGKTAGKD A  KTTY KLMGM+GA+ EARR V
Sbjct:  155 LGLAGG-QAMDLELEGRDDTTLEDLRWIHRHKTGALLNVAVCAGAILGGASPKDVAAMETFSDAIGLAFQVADDILDCTQTTEQLGKTAGKDEAVSKTTYVKLMGMDGARAEARRLV 270
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BLAST of mRNA_H-paniculata_contig14265.2586.1 vs. uniprot
Match: A0A7S2V1Y7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Y7_9STRA)

HSP 1 Score: 155 bits (392), Expect = 5.750e-45
Identity = 76/114 (66.67%), Postives = 92/114 (80.70%), Query Frame = 1 
Query:   13 VGGRQVMDMECEGKSGVGLDELRWIHRHKTAALLKVACTAGALLGGASEKDVKNMELFSESVGLAFQVADDILDCTQTSEQLGKTAGKDMAAGKTTYPKLMGMEGAKKEARRQV 354
            + G QVMD+ CE K GV L++L WIH HKTAALLKVA   GA++GGAS++DV   E F+E +GLAFQVADDILD T TSE+LGKTAGKD+   KTTYPKL+G+EG+KKEARR +
Sbjct:  118 IAGGQVMDLICEDKPGVTLEDLTWIHTHKTAALLKVAVACGAIIGGASDEDVALCETFAEDIGLAFQVADDILDVTATSEELGKTAGKDVDVNKTTYPKLLGLEGSKKEARRLI 231
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BLAST of mRNA_H-paniculata_contig14265.2586.1 vs. uniprot
Match: A0A7S2RH45_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RH45_9STRA)

HSP 1 Score: 156 bits (394), Expect = 2.240e-44
Identity = 77/118 (65.25%), Postives = 98/118 (83.05%), Query Frame = 1 
Query:    1 PLTMVGGRQVMDMECEGKSGVGLDELRWIHRHKTAALLKVACTAGALLGGASEKDVKNMELFSESVGLAFQVADDILDCTQTSEQLGKTAGKDMAAGKTTYPKLMGMEGAKKEARRQV 354
            P+ + GG QVMD+ECEGK GV LDELRWIH HKTAALL+V+   GA+L GA++++VK  E ++  VGLAFQVADDILD TQ++E+LGKTAGKD+ A KTTYPKLMG++G++ EA+R V
Sbjct:  196 PVGLAGG-QVMDLECEGKEGVTLDELRWIHTHKTAALLQVSVATGAILAGATDEEVKACETYALDVGLAFQVADDILDVTQSTEELGKTAGKDLDADKTTYPKLMGLDGSRAEAKRLV 312
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BLAST of mRNA_H-paniculata_contig14265.2586.1 vs. uniprot
Match: W7U7B5_9STRA (Geranylgeranyl pyrophosphate synthase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U7B5_9STRA)

HSP 1 Score: 154 bits (390), Expect = 2.340e-43
Identity = 76/116 (65.52%), Postives = 95/116 (81.90%), Query Frame = 1 
Query:    7 TMVGGRQVMDMECEGKSGVGLDELRWIHRHKTAALLKVACTAGALLGGASEKDVKNMELFSESVGLAFQVADDILDCTQTSEQLGKTAGKDMAAGKTTYPKLMGMEGAKKEARRQV 354
            T + G QVMD+ECEGK GVGL+EL WIH HKTAALLKV+  AGA+LGGAS ++V+  E ++  +GLAFQVADDILD T ++E LGKTAGKD+   KTTYPKL+G+EG+++EARR V
Sbjct:  241 TGLAGGQVMDLECEGKEGVGLEELTWIHTHKTAALLKVSVAAGAILGGASAEEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLV 356
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BLAST of mRNA_H-paniculata_contig14265.2586.1 vs. uniprot
Match: A0A6U5JU78_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5JU78_9STRA)

HSP 1 Score: 150 bits (380), Expect = 2.630e-42
Identity = 77/118 (65.25%), Postives = 94/118 (79.66%), Query Frame = 1 
Query:    1 PLTMVGGRQVMDMECEGKSGVGLDELRWIHRHKTAALLKVACTAGALLGGASEKDVKNMELFSESVGLAFQVADDILDCTQTSEQLGKTAGKDMAAGKTTYPKLMGMEGAKKEARRQV 354
            P+ + GG QVMD+ECE K GV L++L WIH HKTAALL+VA +AGA+LGGAS ++V+  E F+  +GLAFQVADDILD T  S+ LGKTAGKD A  KTTY KLMG+EG+KKEARR +
Sbjct:  194 PVGLAGG-QVMDLECEAKEGVTLEDLTWIHTHKTAALLQVAVSAGAILGGASPEEVERCEKFALDIGLAFQVADDILDVTADSQTLGKTAGKDEATDKTTYVKLMGLEGSKKEARRLI 310
[Close]
BLAST of mRNA_H-paniculata_contig14265.2586.1 vs. uniprot
Match: A0A7S2Y6Q7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y6Q7_9STRA)

HSP 1 Score: 149 bits (377), Expect = 7.540e-42
Identity = 75/118 (63.56%), Postives = 94/118 (79.66%), Query Frame = 1 
Query:    1 PLTMVGGRQVMDMECEGKSGVGLDELRWIHRHKTAALLKVACTAGALLGGASEKDVKNMELFSESVGLAFQVADDILDCTQTSEQLGKTAGKDMAAGKTTYPKLMGMEGAKKEARRQV 354
            P  + GG QV D+ECEGK    LDELRWIH HKTA LL+VA  +GA++GGAS ++VK  E F+ ++GLAFQVADDILD TQ++E+LGKTAGKD+ A KTTYPKL+G++GA+ EA R V
Sbjct:  195 PKGLAGG-QVKDLECEGKGEATLDELRWIHTHKTATLLEVAVASGAIMGGASPEEVKACEQFALNIGLAFQVADDILDVTQSTEELGKTAGKDLDADKTTYPKLLGLDGARAEAERLV 311
[Close]
BLAST of mRNA_H-paniculata_contig14265.2586.1 vs. uniprot
Match: B7FU89_PHATC (Farnesyltranstransferase n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FU89_PHATC)

HSP 1 Score: 147 bits (371), Expect = 5.530e-41
Identity = 71/114 (62.28%), Postives = 92/114 (80.70%), Query Frame = 1 
Query:   13 VGGRQVMDMECEGKSGVGLDELRWIHRHKTAALLKVACTAGALLGGASEKDVKNMELFSESVGLAFQVADDILDCTQTSEQLGKTAGKDMAAGKTTYPKLMGMEGAKKEARRQV 354
            + G QVMD+ECEGK    L++LRWIH HKTA LL+VA  +GA++GGAS ++VK  E F+ ++GLAFQVADDILD TQ++E+LGKTAGKD    KTTYPKL+G++GA++EA R V
Sbjct:  195 LAGGQVMDLECEGKGSATLEDLRWIHTHKTATLLQVAVASGAIIGGASAEEVKACEQFALNIGLAFQVADDILDVTQSTEELGKTAGKDEDTDKTTYPKLLGLDGAREEAERLV 308
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14265.2586.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS52_ECTSI4.120e-5986.36Geranylgeranyl pyrophosphate synthetase, chloropla... [more]
H6WB80_VAULI2.180e-4669.30Farnesyltransferase n=1 Tax=Vaucheria litorea TaxI... [more]
A0A7S1XUM3_9STRA2.200e-4668.97Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A835ZD72_9STRA3.560e-4670.09Farnesyltransferase n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S2V1Y7_9STRA5.750e-4566.67Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2RH45_9STRA2.240e-4465.25Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7U7B5_9STRA2.340e-4365.52Geranylgeranyl pyrophosphate synthase n=3 Tax=Mono... [more]
A0A6U5JU78_9STRA2.630e-4265.25Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2Y6Q7_9STRA7.540e-4263.56Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
B7FU89_PHATC5.530e-4162.28Farnesyltranstransferase n=3 Tax=Phaeodactylum tri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14265contigH-paniculata_contig14265:106..6565 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score148.3
Seed ortholog evalue2.2e-33
Seed eggNOG ortholog227086.JGI_V11_53420
Preferred nameGGPS1
KEGG rclassRC00279
KEGG koko:K13789
KEGG ReactionR01658,R02003,R02061
KEGG Pathwayko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130
KEGG ModuleM00364,M00366
Hectar predicted targeting categoryother localisation
EggNOG free text desc.isoprenoid biosynthetic process
EggNOG OGsCOG0142@1,KOG0776@2759
Ec32 ortholog descriptionGeranylgeranyl pyrophosphate synthetase, chloroplast precursor;
Ec32 orthologEc-16_004330.1
EC2.5.1.1,2.5.1.10,2.5.1.29
COG Functional cat.H
BiGG ReactioniRC1080.CRv4_Au5_s12_g2763_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01006
Exons4
Model size354
Cds size345
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14265.2586.1prot_H-paniculata_contig14265.2586.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig14265 115..6565 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929135.778989-UTR-H-paniculata_contig14265:105..1141622929135.778989-UTR-H-paniculata_contig14265:105..114Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14265 106..114 +
1691480745.0044048-UTR-H-paniculata_contig14265:105..1141691480745.0044048-UTR-H-paniculata_contig14265:105..114Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14265 106..114 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929135.7893918-CDS-H-paniculata_contig14265:114..2221622929135.7893918-CDS-H-paniculata_contig14265:114..222Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14265 115..222 +
1691480745.0168278-CDS-H-paniculata_contig14265:114..2221691480745.0168278-CDS-H-paniculata_contig14265:114..222Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14265 115..222 +
1622929135.8022478-CDS-H-paniculata_contig14265:2541..26381622929135.8022478-CDS-H-paniculata_contig14265:2541..2638Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14265 2542..2638 +
1691480745.029011-CDS-H-paniculata_contig14265:2541..26381691480745.029011-CDS-H-paniculata_contig14265:2541..2638Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14265 2542..2638 +
1622929135.812741-CDS-H-paniculata_contig14265:4419..44811622929135.812741-CDS-H-paniculata_contig14265:4419..4481Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14265 4420..4481 +
1691480745.0402918-CDS-H-paniculata_contig14265:4419..44811691480745.0402918-CDS-H-paniculata_contig14265:4419..4481Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14265 4420..4481 +
1622929135.8225598-CDS-H-paniculata_contig14265:6487..65651622929135.8225598-CDS-H-paniculata_contig14265:6487..6565Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14265 6488..6565 +
1691480745.049512-CDS-H-paniculata_contig14265:6487..65651691480745.049512-CDS-H-paniculata_contig14265:6487..6565Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14265 6488..6565 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig14265.2586.1

>prot_H-paniculata_contig14265.2586.1 ID=prot_H-paniculata_contig14265.2586.1|Name=mRNA_H-paniculata_contig14265.2586.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=115bp
MVGGRQVMDMECEGKSGVGLDELRWIHRHKTAALLKVACTAGALLGGASE
KDVKNMELFSESVGLAFQVADDILDCTQTSEQLGKTAGKDMAAGKTTYPK
LMGMEGAKKEARRQV
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mRNA from alignment at H-paniculata_contig14265:106..6565+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig14265.2586.1 ID=mRNA_H-paniculata_contig14265.2586.1|Name=mRNA_H-paniculata_contig14265.2586.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6460bp|location=Sequence derived from alignment at H-paniculata_contig14265:106..6565+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCGTTGACAATGGTTGGGGGGAGGCAGGTGATGGATATGGAGTGCGAGGG
CAAGTCTGGGGTGGGGTTGGACGAGCTGAGGTGGATCCACCGACACAAGA
CGGCAGCGCTTCTCAAGGTGACATATTATTACATTATTTCTTGATGGTAT
GGCATCAGCTTGGCGTACTGTACAGGATAGTTCAGTTCAGTTCCCGTAAG
CAGATGAGTGGAAAAATGATAGGACGAGAGGGGAAGGGTGACGGGGGCGG
GGGGGGCGTGTCATAACCCCATCTACCCATATCGAGGTTATGCAGTTGTA
TACACTGGTCAGCAAAAATAAGTCAGTAAGTCGGGGTTATTTCGTTTTCA
CCAGTCGAAACTTGCTTTTCACCTCTCTGTTGGTGTATTTGAATATTTTT
TTGGTCGTCATTCAGAGAGCAAGTGAGTTGCCAGTTCCCTTTGCGTTACT
AAGTTTCATGAGAACGGTATACGAAGATTGGTGATGTGCTGAAAATATTT
CACCCCCCGAACAATACGAATAATTGGCCTATTCGCCACGATGATTGAAA
AAGTATTGGCCTGAGTTTCAGAATGAGGGGACACAGAAAATGTACTCCAT
TCGATTTACGAGTATTGCTAGCAGTTGTGGATGATTTGGGATATACGAAA
TACACGAGTTCAGTCTAAAATTTAGGCGAATACTTTAACAGTTTTTGTGG
CGAATACGTCAAGTTTTCGTTATCTGTGTGGGGTGAAATTTTTTGACGTG
CAGTTTTGGAAAACTCCCCCCTAAAAGTAGCAGCAAACAGTGGACGTGTT
AAATATTTCACTTCTCCAACAGTGGATTTTTAAACTTCGCTCAAGATGTC
GTTTTTCCATGAAAGTTCAGCTCCTGTACTCCTGAGTCTTTTGAAAGGGG
GTCCTTTTTTTTTTTTTGTTTTGGCCCATGTGGTTCTGTCACCTCGATTT
TTCCTTTGTGACCAGGGGCGGATCGCAGTACACAGAGTTGCGTGTTTCGT
GTGGGTGAGTTGCATTTAGGGGCCCACTGCTGTCTCTGTGAGGCAAATTT
ATATATTGATCTGTCGTGCAAGAACAACAACAACAAGAACGAAAAATTGT
GGAGTCGAGGTACGAAATGGTGGGTGCTAGCTACCTCATGGATAAAATAG
ATAAAAAAAAACTAGCAAGCTCTACATGTATAAGATAAAGAGGGAGGAAC
AGAGATGATGCGGTATTTATATATTTATATACATATGAAAAAATAAAACG
TCAAAAGTGGGGGAAAAGTCAACGTTTGACTCCTCCAGCATTGGAAGCTA
CGTATTACTCCGCAGTGTTGTTTTCGCCAATCGCTTTTGTTTTATATGTA
GGTATGTTTTCTTTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
ATTTTCAGTATTTAGGTATGTTCGATATCGTTAAGGCGAAGAACGAAATG
TCATAGGGAACACACTAAGTTGAAGTGTTTGTGGTGCCGACGGATCTTCT
CCGCCATGTAGTCAGGGGACATGGAGCTGTTGGTTTATGTATGCGGTTGG
ACGGTCAGATCGGGCGCGGTGACCCTTGTTTGTCACAAGAACAAATTTCA
AACGTGTTGGTGCGTTTCATTGACACACAGATCTAGGCTTGACCAGTGAA
GTTGCGTCGTGGGGCAGGTGCGGGAGGGGGTAACGGGCACCGCTCTCTGC
CGTTGTGTGTGCGTGGGAGCATTGCAGGATTTGAAGCGCTTTTGTTCGCA
ACCTGGAACAACAGTTCATCTTCGTCGAGCCGTTGTTTTTTGTATTTGTC
GTCGCATGTCATTTTTGTCATTCTCTTTTTTTTTAACTATTTTTTTAGGT
AATTAAATCAACTATTCCGTACAGTAGGTGACGCATTTCAAGGGATTATA
GTGTCGCGGGGATTTGAGGCACCTTATATTCCGAAAATACTGGATTGCTT
TCGTCGGCTTATTACGAATCCAAGTCCCTTATTGGGGGGATGGAAACACT
TTGTGAATTTTACGTACAAACGCCACAGATCCCGTATTTGTAAGTAAACT
AGCATATGTCTCGGACAGGAACCCCTCGTTCGATGGCATCAGCACGAAGC
ATATAAGAACATTCATTGACAAAAGAACTCGGAAAGAGAGACGTATTGGT
TCGAGGGGTCCCTTATTTGATGACGAGAGTGAGGCTGAGGTTCTTTGAAA
TGGGCATCGGCCGTGCGCACATATTTGTGGTCCCTTTTATCCTGGAATCG
AATCTCCTATCTCCAGGTCCCTTAAAGGGGGGCAACCTACTGTATTCAAT
CCATTCGTCCGCTTTTTCGTTTTTTTTTTTTCTTTTTTTTCCGCCTTTCT
CGTTCCCCTTGTACTATTTACAGACGGTGGTATGTGGTGATCTGTGGTGA
TCATGTACTAACTATTTCCTATTTTTCATGTTGAAGGTGGCATGCACGGC
GGGGGCTTTATTGGGCGGAGCTTCCGAGAAGGACGTGAAGAACATGGAGT
TGTTCAGCGAGTCGGTTGGACTGGCGTTCCAGGGTAGGTGTTTTTTTGTT
TTGTATTTTTCACGGGGGGAGAAGAAATAAGCGTCCGATGGAATCTGTGT
TGTGGGTCGATTTGAAGCCTCGTTTTTATTTCGTTCTAGAGATGTTTTTT
TTTAAAAGAAATAGAACAGGCGGACAGAGACAAAGATAGAGACTGAGATT
AACAAGGCCAAAATCCATCCGCCAAGAGAAAAAAAAAACAATGGGTGTGT
CTTGATACCTCCTACTTGAATATGCATGCATGGCATATATATATGTATAT
CTCCCCATCATACTCCGCCGTTCGATTTATCTCCGAGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTC
GGGGCTTCACCCATAACTTGCATGTTGATTTTTTGGCGCGTTTGTTTTTT
CCCAACGAATCGCTAAGAAAGAGAAAATCTCTCGAATAAGCTTACCCCAT
GAAGTGGTCTCACGTGTGTGTGTGTGTGTGTGTGTTTTTTAATTCAATTA
GTGCGTGTTTTTTCAAGGGATTCCCTCGGTGAAATGATCGAACGACCGTG
GAGGATGATATGAAATGCTCACGAGAAGAGTATAGTTGAGAATGTTGAAT
TTTCGAAAGTAGGACGACAACGAGAAATTCCGCGAAGAAAAGCTCACAGT
GACTACTGTGTTATGAGTCGGGCTACGGCATCAGCGCGCGGGGAGGGAGG
TGTTTGGAGCCACTTGTGTAAGAATAGCCATTTCGAAAAGCGGCTCGCAA
AAAAATTCATTTCGATACAAATTCAGACGTACTCAATGGCGTACGTTCAT
GTATCTCTAGAGACGCACAGTACACGATTCGGAACGGCGGTGCTGTTGAA
GGAGGAGAAGATATTGCGCCTAGCCGCTCCCAAAAGTGGCTCGAAACGTG
AAAAAATTAACTCAGCGACCCCCTCCCCTCTCCCATAGCCCGGCTCTTGT
GCGATAATAATCGTCTGTGGTGATTTACCGCGGTAAAGTGAACCTTGATC
ATAAAGTAATGCCGTGGCCATAACACGGTAATAATCTAATCTAATCCCGT
CTGCGGAAAATAAAAATACCTATAAATTTTTTCCACCGGGCGTGACGTTC
CCTATGTTCCTTGGAAGAGCTTATTTTACTGGAGGTTGCTCCTGCTACGT
GCTATGTTGAAAGATACATGTATTCGTTCATTTCACCTAGGGGACCCCTG
TTTTTTCTCGACCGTAAAGCCTTTGAGCTGTACCCGCGTTTAACGCTTTT
TTCTTTGAGGATCGACGCCCGGATGGGTAGCGGTGACTTGTGTACCGAGT
CGAGCTGGGAGTGTTTGCAGGAGGTTTACTCGGTTTGACTCCGAGACTAC
CTGGGTAAGAACGGAGTAGAGCTTACCTAGGTGTCTACCCGTCCGCGGAA
ACCGTTGTTATGACATCCCACGCAGGGATCGAAATGAGGTGAAAGCGGGG
CGCACCGGGAAACCGGCAAAGCACCGCACGAAAGCAATATTGTATAAGTG
CATGGCAGGGGTTCCTTGCTGGTCTCCCGGGGACCGAAAAAAAACAAAAC
AAAAAGCTTTTTTCTTGGGGGATACTTTTTTTTTTATAGTGCAGTTTTTT
TTTTGCACTTCCTGTTGTAGATTTGATCGTATATATATAAATATATATAT
ATATATATCATAGTAGTGCCGACTCGTTTTGTAATGGTGCACTCTAACGG
TAAAGTAGCATTCGAGTCGTCTATGCGCGTGTATTTAACTTTTTTGTGTG
TATTTTCTCCGCAGTGGCTGATGACATCCTGGATTGCACACAGACGTCTG
AGCAGCTCGGCAAGACGGCGGGCAAGGTGCGCATAACCGTGGCCGTCTGA
AATCAATCATCATAGATCAGTAAATACAGGCATCAGTGCCGTACCTCTCG
CCGCTCTCTCTTAACTCCTTCGGGACTTCTTATGACCTCTAAACCATGTG
TGGAGTGCTTGTGTTTTATTTGGCCGTTACGAAAAGAGACGGTTAAGGCA
CAAGGCTATTTGTCGACGCATTCGTCATTATTTACCACTTTTATGAAGTT
CGGTTCCTAAAGACTTGAGGCGACTCGGTAGAAGTCGCAGCGGCGGTCGT
CCATGAGGAGAGAGCGGCGGCGGTGGTGGCGGTCGGAAGGGGCAGCGGGC
AGGTTCCAAACAAACGAGACGATGTCAGCTGGTGTCACTCGTTCAAATGT
TACAAAGTGTTGTTTTATTCGAAAGTGTGATCGAAACGGTGGTGAATAAA
CACAAGCAAAATGAAGGAAGCAATAAATTAGTCACTTTTTTTAACCTTTT
CGGTGAAGCAGCCTTGTGAGACCTGCTTTCTGGTATCTGTTATTTTTATT
TTTATTTTTTTTAATATATCCGTACCAAAACCTCGGGACGCACAACCCAT
CGTAGGTCTATTTTTTTGGGCTGCTGCACCCAGATGTACTTTTCGGGCAC
TCCTTCCTTCTGAATCTGGCAAAAAAAAATTGCTGATTTTCGCGATAACT
CGGATGCAAATTTTGAGCGATGTTACGAAAAGTACCAGTAGAGTTTTCTT
GACACGTGAAATAGCGGCAAGGACTCTAAGTTAGGTTTTGGACCCCTCCA
AGTTGGCCGAAATTACTTGCAGTTGGTGTAAAATATAGATGTGGCCAATT
CGGATCCGACAACCTTTGGTCCTTTCCCATAACCGTTTCATTTTTAAGGG
CCGTTCGTTCCTAATGAGCGAGTTGGATTTTCCGATTTTCCGATTTTTGT
CCGAGAGGTTATATATAGATCGCAAACCATTTCATTCGGATTTTTTTCCA
TTTCCGAATGAGATGGTTATTCGACATGAAGTCTTTGCATTAAAAAAAAC
CAAAAAACGTCGGAAGTTGTAAAAATCGGACAAGTAATAGCTCGTTTTGA
ATGCACACCTAATAAGGCACTCTCTTTTGTAGGTAGTTTGATTATTTCAT
GACATATTGGAGTTTTCATTATCCTGGGGGTCATCCAGCTGTCACTTCAA
GAGTTGTGTGTACCCCCGTGGGCGCTAGAGGCTACTGTAATACGGGCGGA
CGGCACATGAAGGACTGCGGTTTGGAGGTTTTAGATCATCGGCCTAGGGT
CCAGTGTACCAGTGAATGGAAGTTAGCGCCAAATTTTCAGACTGCGAAAT
GAGTTTGAGAATCTCGAGGTGGCATTCAGAACCCTGTGTCTAGCGCTTGA
GTGTTTTGTACCAAACGTCTGCGAGGGGGAGGGGGGGGGGGAGGGGGGTT
GGAGGGTTAAAGAGTAGTGACGTTACAACCGGCATGATGTGAAAAGCATA
TCTTCCAGGGGAAACTCGGGTGGAGTAGATTCCTTCTATGCTGGCGCAAA
ACCGTCGTTACTTTTTTTGTGTTGATATTGTCTTGTAACCGAGCGAATGC
CAATGGAGGATCAGGACTGCGTGCTAGCTAAATGTAGCGACGAAATGTCG
AAGAGGCTGTGCTTGAGGTTTTGCATGCGTGCATGGTACCGTCCCGACAT
GCAGGACCCACTATATGCCCCGGCGTACTTGATGATATGTCTTGTGTCCG
GCTATAGTGTCTACATTTCGGCCTGGTCTAAATTGCACTGAGAGCAGGTT
GTATACCTACTGTGGGGTCTGTTTTGCTACAACTATTATATATGGGTAGT
GTTTTTTTTTTTACTAACCCAGTTTACGTGCCAAACTACTTCTTCCATTG
TAAAAATTCCTCGCTCTCTGTATGCCTTGTTTCGGCATCTCGTTGGTACT
GTCTCGTTTCGTTTTGTTTTATTCCTCGTTTTTTTTTTTTGTTTTTTTCC
CCTGTGTTCTTTCGCATTTTGCACGCCTTCAGGATATGGCCGCCGGTAAG
ACAACTTACCCGAAGCTAATGGGTATGGAGGGCGCTAAAAAGGAGGCTCG
GAGGCAAGTC
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Coding sequence (CDS) from alignment at H-paniculata_contig14265:106..6565+

>mRNA_H-paniculata_contig14265.2586.1 ID=mRNA_H-paniculata_contig14265.2586.1|Name=mRNA_H-paniculata_contig14265.2586.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=690bp|location=Sequence derived from alignment at H-paniculata_contig14265:106..6565+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTTGGGGGGAGGCAGGTGATGGATATGGAGTGCGAGGGCAAGTCTGG
GGTGGGGTTGGACGAGCTGAGGTGGATCCACCGACACAAGACGGCAGCGC
TTCTCAAGATGGTTGGGGGGAGGCAGGTGATGGATATGGAGTGCGAGGGC
AAGTCTGGGGTGGGGTTGGACGAGCTGAGGTGGATCCACCGACACAAGAC
GGCAGCGCTTCTCAAGGTGGCATGCACGGCGGGGGCTTTATTGGGCGGAG
CTTCCGAGAAGGACGTGAAGAACATGGAGTTGTTCAGCGAGTCGGTTGGA
CTGGCGTTCCAGGGTGGCATGCACGGCGGGGGCTTTATTGGGCGGAGCTT
CCGAGAAGGACGTGAAGAACATGGAGTTGTTCAGCGAGTCGGTTGGACTG
GCGTTCCAGGTGGCTGATGACATCCTGGATTGCACACAGACGTCTGAGCA
GCTCGGCAAGACGGCGGGCAAGTGGCTGATGACATCCTGGATTGCACACA
GACGTCTGAGCAGCTCGGCAAGACGGCGGGCAAGGATATGGCCGCCGGTA
AGACAACTTACCCGAAGCTAATGGGTATGGAGGGCGCTAAAAAGGAGGCT
CGGAGGCAAGTCGATATGGCCGCCGGTAAGACAACTTACCCGAAGCTAAT
GGGTATGGAGGGCGCTAAAAAGGAGGCTCGGAGGCAAGTC
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