prot_H-paniculata_contig14260.2584.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14260.2584.1
Unique Nameprot_H-paniculata_contig14260.2584.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length240
Homology
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: A0A0J7K416_LASNI (Lectin receptor kinase n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K416_LASNI)

HSP 1 Score: 99.8 bits (247), Expect = 5.180e-21
Identity = 52/103 (50.49%), Postives = 70/103 (67.96%), Query Frame = 0
Query:  137 VVSEEKPKSVAEALNGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL 239
            +V + +P S  EA+ GPE +KW+ A  EE  A+ +N TW       LP GR+ I  KWIFK+KL+E+G++ RYKARLVA+G+SQ EG D+ ET APV R  T+
Sbjct:  168 LVEKGEPVSYEEAIKGPEGEKWKEAINEELDAMEKNSTWTVVK--NLPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQREGIDYEETFAPVVRYETV 268          
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: UPI0015A81C6A (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A81C6A)

HSP 1 Score: 95.1 bits (235), Expect = 6.000e-21
Identity = 47/97 (48.45%), Postives = 66/97 (68.04%), Query Frame = 0
Query:  143 PKSVAEALNGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL 239
            P+++ EAL  P+A+KW+ A EEE   L  N TW        P GRK ++ KW+FKRKL +DG + RYKARLVA+G++QVEG D+ ET +PV +  ++
Sbjct:   31 PETLEEALTSPDAEKWKLAMEEELENLKRNETWDIVP---RPEGRKVVKCKWVFKRKLNKDGQVERYKARLVARGYTQVEGIDYKETFSPVIKTKSI 124          
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: A0A6V7JMB6_9HYME (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7JMB6_9HYME)

HSP 1 Score: 95.9 bits (237), Expect = 6.210e-21
Identity = 51/104 (49.04%), Postives = 69/104 (66.35%), Query Frame = 0
Query:  136 EVVSEEKPKSVAEALNGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL 239
            +V ++E+P S  EA++GP+A+KWR A +EE  +L+ N TW  +   +LP G+ A+  KW+FK K   DG   RYKARLVAQGFSQ  G D+ E  APV R +T 
Sbjct:   28 DVQAQEEPISYEEAMDGPDAEKWRIAMDEELNSLMSNNTWSVQ---QLPKGKSAVGCKWVFKIKRHADGRPDRYKARLVAQGFSQKFGTDYNEVFAPVVRHATF 128          
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: I1PI69_ORYGL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Oryza glaberrima TaxID=4538 RepID=I1PI69_ORYGL)

HSP 1 Score: 99.0 bits (245), Expect = 7.460e-21
Identity = 47/97 (48.45%), Postives = 68/97 (70.10%), Query Frame = 0
Query:  143 PKSVAEALNGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL 239
            PKS++EA   P+AD W+ A   E  +++ NGTW+       P G K +  KW+FK+KL  DG+I +YKARLVA+G++Q EGEDFF+T +PV R++T+
Sbjct:  184 PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVT---ERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQNEGEDFFDTYSPVARLTTV 277          
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL)

HSP 1 Score: 100 bits (250), Expect = 7.540e-21
Identity = 51/90 (56.67%), Postives = 64/90 (71.11%), Query Frame = 0
Query:  150 LNGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL 239
            + GPEA+ W+AA ++E  +L ENGTW+      LP GRKA+  KWIFKRKL+EDG++ RYKARLVAQGF+Q  G D+ E  APV R  T 
Sbjct:    1 MKGPEAELWKAAMDDEMTSLRENGTWQLTD---LPPGRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGFTQKFGTDYDEVFAPVVRQVTF 87          
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: Q6L4Z3_ORYSJ (Putative ubiquitin carrier protein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q6L4Z3_ORYSJ)

HSP 1 Score: 100 bits (249), Expect = 1.500e-20
Identity = 46/97 (47.42%), Postives = 69/97 (71.13%), Query Frame = 0
Query:  143 PKSVAEALNGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL 239
            PKS++EA   P+AD W+ A   E  +++ NGTW+       P G K +  KW+FK+KL+ DG+I +YKARL+A+G++Q EGEDFF+T +PV R++T+
Sbjct:  667 PKSISEAYTSPDADYWKEAVRSEMDSIIANGTWEVT---ERPYGCKPVGCKWVFKKKLKPDGTIEKYKARLIAKGYTQKEGEDFFDTYSPVARLTTI 760          
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: Q2QTT3_ORYSJ (Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q2QTT3_ORYSJ)

HSP 1 Score: 100 bits (248), Expect = 1.940e-20
Identity = 48/105 (45.71%), Postives = 72/105 (68.57%), Query Frame = 0
Query:  135 TEVVSEEKPKSVAEALNGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL 239
            T  + ++ PKS++EA   P+AD W+ A   E  +++ NGTW+       P G K +  KW+FK+KL  DG+I +YKARLVA+G++Q EGEDFF+T +PV R++T+
Sbjct:  166 TVYLMDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVT---ERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTI 267          
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: I1PQ20_ORYGL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Oryza glaberrima TaxID=4538 RepID=I1PQ20_ORYGL)

HSP 1 Score: 99.8 bits (247), Expect = 2.010e-20
Identity = 47/97 (48.45%), Postives = 68/97 (70.10%), Query Frame = 0
Query:  143 PKSVAEALNGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL 239
            PKS++EA   P+AD W+ A   E  +++ NGTW+       P G K +  KW+FK+KL  DG+I +YKARLVA+G++Q EGEDFF+T +PV R++T+
Sbjct:  184 PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVT---ERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTI 277          
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: Q7XRW0_ORYSJ (OSJNBb0058J09.8 protein n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q7XRW0_ORYSJ)

HSP 1 Score: 100 bits (248), Expect = 2.140e-20
Identity = 48/97 (49.48%), Postives = 68/97 (70.10%), Query Frame = 0
Query:  143 PKSVAEALNGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL 239
            PKS++EA   P+AD W+ A   E  ++V NGTW+       P G K +  KW+FK+KL  DG+I +YKARLVA+G++Q EGEDFF+T +PV R++T+
Sbjct:  672 PKSISEAYASPDADYWKEAVRSEMDSIVANGTWEVT---ERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTI 765          
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: B9GAB8_ORYSJ (Integrase catalytic domain-containing protein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=B9GAB8_ORYSJ)

HSP 1 Score: 99.8 bits (247), Expect = 2.500e-20
Identity = 47/97 (48.45%), Postives = 68/97 (70.10%), Query Frame = 0
Query:  143 PKSVAEALNGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL 239
            PKS++EA   P+AD W+ A   E  +++ NGTW+       P G K +  KW+FK+KL  DG+I +YKARLVA+G++Q EGEDFF+T +PV R++T+
Sbjct:  531 PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVT---ERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTI 624          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0J7K416_LASNI5.180e-2150.49Lectin receptor kinase n=1 Tax=Lasius niger TaxID=... [more]
UPI0015A81C6A6.000e-2148.45uncharacterized mitochondrial protein AtMg00820-li... [more]
A0A6V7JMB6_9HYME6.210e-2149.04Reverse transcriptase Ty1/copia-type domain-contai... [more]
I1PI69_ORYGL7.460e-2148.45Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A182GIT5_AEDAL7.540e-2156.67Reverse transcriptase Ty1/copia-type domain-contai... [more]
Q6L4Z3_ORYSJ1.500e-2047.42Putative ubiquitin carrier protein n=1 Tax=Oryza s... [more]
Q2QTT3_ORYSJ1.940e-2045.71Retrotransposon protein, putative, Ty1-copia subcl... [more]
I1PQ20_ORYGL2.010e-2048.45Reverse transcriptase Ty1/copia-type domain-contai... [more]
Q7XRW0_ORYSJ2.140e-2049.48OSJNBb0058J09.8 protein n=2 Tax=Oryza sativa subsp... [more]
B9GAB8_ORYSJ2.500e-2048.45Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 183..238
e-value: 3.0E-14
score: 53.2
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 97..238
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 97..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14260contigH-paniculata_contig14260:4370..5155 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14260.2584.1mRNA_H-paniculata_contig14260.2584.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14260 3812..6483 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14260.2584.1 ID=prot_H-paniculata_contig14260.2584.1|Name=mRNA_H-paniculata_contig14260.2584.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=240bp
MYIPKKSIQLSRNVKFDEEDFVIGHRGQQEHDGTRDMEGLLSAPSVTPAV
SRSRARGVRGDVTNTEKPTSTSSAARANPYNDDSEGETRTESGTKEQRPR
GRSPILTRARVRESCEEDPGATARVAKVEDTGNPTEVVSEEKPKSVAEAL
NGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKL
EEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like