mRNA_H-paniculata_contig14260.2584.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig14260.2584.1
Unique NamemRNA_H-paniculata_contig14260.2584.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: A0A2M4CK12_ANODA (Putative pol polyprotein (Fragment) n=1 Tax=Anopheles darlingi TaxID=43151 RepID=A0A2M4CK12_ANODA)

HSP 1 Score: 247 bits (631), Expect = 7.430e-67
Identity = 186/573 (32.46%), Postives = 285/573 (49.74%), Query Frame = 1
Query:    4 EGRHFAIIFVDDYSRMRKAYALRHKSEALWILKQFERDIAKANGQQIKHLRSDQRKEFTGESFGRVWA*NGIKQAFSAVYTPQQNGVAERSWRQVFEMI*GKMITADMCRRYWVEAARAAVYCLNRPPTRPHNRGTPYEKGHGTTPKLDHLRVFGWTAYGMLQ*PQRRKLDDKAWVRVFLGYD------RHMYIPKKSIQLSRNVKFDEE---DFVIGHRGQQEHDGTRDMEGLLSAPSVTPAVSRSRARGVRGDVTNTEKPTSTSSAARANPYNDDSEGETRTESGTKEQRPRGRSPILTRARVRE-SCEEDPGATARVAKVEDTGNPTE-----VVSE--EKPKSVAEALNGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL*AIFSLAAEHDFKLEGMDVDTAYLNAPVKEELFVQRPHEFSPFSRHIPFVHRLYKTLYDLKLSGRNWNNTLDDIRAGTGLDRSITDPCLYFSHDKGGETDILVTVYVDDLDIV-GRREKVDEFKHDLSLAFQ 1668
            +G  + +  +DD+SR    Y L+ KSE    +  + +       +  K +RSDQ  E++ ++    +   GIK  ++A Y+PQQNGVAER  R + EM+   +  A + ++YW EA   AVY  N  PT+P N  TPYE  HG  PK++HLR+FG  A+  +   +R+KL   A    FLGY       R +      I +SR+VKF E+        H  +  H   +  E ++                   D T  E           NP   +++ E   +   +E          TR  V E   + +P  + R  K    G P +     V+    E+P + +EA+   E+  WRAA +EE  AL  N TW+     RLP+GRKA+  KW +KRK  E+G I RYKARLVAQG+SQ  G+D+ E  APV R +T   I +LA++ +  ++ +D+  AYL+A ++E++++++P     F++    V  L K+LY LK S R WN  +D +       ++  D CLY    +G +  IL+  YVDD+  V   +E+ +E +  L   F+
Sbjct:   53 QGYKYFMTMIDDFSRHCTIYFLKEKSEVTTKIMDYVKMAKTQFRKTPKAIRSDQGGEYSSKNLQDFYKREGIKPQYTASYSPQQNGVAERKNRSLIEMVRCMLFDAQLEQKYWAEAMNTAVYLQNISPTKPRNN-TPYETWHGVKPKVNHLRIFGCDAWAHIPKAKRKKLGATAQKLTFLGYSYDHKAYRLLDKTTNEIHISRDVKFIEKAPCSERAKHDRETRHQSKKPQEIII-------------------DTTLKE-----------NPITIETQAEPEVQPAFEE----------TREIVSEIDSDTEPRRSTRPTK----GIPPDRLMANVIKHQIEQPHTYSEAIESTESTAWRAAMQEEINALQGNDTWELV---RLPLGRKAVGCKWTYKRKENENGEIVRYKARLVAQGYSQKFGQDYDEVFAPVIRQATFRTILTLASKQNMIVKHLDIKNAYLHAELQEDIYMKQP---PGFTKGNDLVCHLKKSLYGLKQSARAWNAKIDRVLKEMQFQQAEADQCLYIRTHEGKQDYILI--YVDDIVAVYNTKEEYEELRKRLEQHFK 572          
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: A0A6A2WSU7_HIBSY (Integrase catalytic domain-containing protein n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WSU7_HIBSY)

HSP 1 Score: 251 bits (640), Expect = 1.670e-66
Identity = 182/561 (32.44%), Postives = 285/561 (50.80%), Query Frame = 1
Query:    7 GRHFAIIFVDDYSRMRKAYALRHKSEALWILKQFERDIAKANGQQIKHLRSDQRKEFTGESFGRVWA*NGIKQAFSAVYTPQQNGVAERSWRQVFEMI*GKMITADMCRRYWVEAARAAVYCLNRPPTRPHNRGTPYEKGHGTTPKLDHLRVFGWTAYGMLQ*PQRRKLDDKAWVRVFLGYDRH-----MYIP-KKSIQLSRNVKFDEEDFVIGHRGQQEHDGTRDMEGLLSAPSVTPAVSRSRARGVRGDVTNTEKPTSTSSAARANPYNDDSEGETRTESGTKEQRPRGRSPILTRARVRESCEEDPGATARVAKVEDTGNPTEVVSEEKPKSVAEALNGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL*AIFSLAAEHDFKLEGMDVDTAYLNAPVKEELFVQRPHEFSPFSRHIPFVHRLYKTLYDLKLSGRNWNNTLDDIRAGTGLDRSITDPCLYFSHDKGGETDILVTVYVDDLDIVGRREKV-DEFKHDLSLAFQ 1668
            G  + + F+DD+SR    Y L+ KSEAL  LK+F+    K +GQ +K LRSD+  E+T + F      +GI    +A YTPQQNGVAER  R + +M    +    + R +W EA R AVY LNR PT+     TP E   G  P + H ++FG  AY  +    R+KLDD+    +F+GYD       +Y P  K I +SR+V+FDE D+    R  +E    + +EGL         +++      +    N    +S+SS A +N   D     T  +  T+E+R   R        V   C                     ++    P +  EA+   E DKWR A +EE  ++  N TW+     R P G   I  KW++K K+ ++G++ +YKARLV +G+ Q +G D+ E  APV R+ T+  + ++A +  +K+  MDV +A+LN  ++EE+++++P  +     H   V+RL K LY LK + R WN  +D+     G  +S  +  LY   ++ G+  ++V +YVDD+   G    + ++FK  ++  F+
Sbjct:  408 GNRYYLTFIDDFSRKCWIYILKEKSEALEKLKEFKAMAEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTARYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHFKIFGCIAYAHVPEHTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKIIISRDVEFDEADYW---RWSEEE---KKVEGLFFEDKDGDLINQDEQADDQDPRQNLPSSSSSSSDA-SNIIEDPEAPPTELQRSTRERRMPERYNDYELNNVSLFC---------------------LLVNSDPITYEEAV---EDDKWRNAMDEEIASIERNDTWELT---RQPEGHNPIGVKWVYKTKINKEGNVEKYKARLVVKGYKQRQGIDYDEVFAPVARIETIRLLTAVATQKGWKIYQMDVKSAFLNGYLEEEVYIEQPPGYIR-KGHEDKVYRLKKALYGLKQAPRAWNTRIDEYFQRNGFMKSPYEHALYTKKNEDGDI-MIVCLYVDDMIFTGNNPGMFNDFKKAMTKEFE 932          
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: A0A5S6QM97_TRIMR (Integrase catalytic domain-containing protein n=2 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QM97_TRIMR)

HSP 1 Score: 240 bits (612), Expect = 2.010e-66
Identity = 182/560 (32.50%), Postives = 268/560 (47.86%), Query Frame = 1
Query:    7 GRHFAIIFVDDYSRMRKAYALRHKSEALWILKQFERDIAKANGQQIKHLRSDQRKEFTGESFGRVWA*NGIKQAFSAVYTPQQNGVAERSWRQVFEMI*GKMITADMCRRYWVEAARAAVYCLNRPPTRPHNRGTPYEKGHGTTPKLDHLRVFGWTAYGMLQ*PQRRKLDDKAWVRVFLGYD------RHMYIPKKSIQLSRNVKFDEEDFVIGHRGQQEH---DGTRDMEGLLSAPSVTPAVSRSRARGVRGDVTNTEKPTSTSSAARANPYNDDSEGETRTESGTKEQRPRGRSPILTRARVRESCEEDPGATARVAKVEDTGNPTEVVSEE-------KPKSVAEALNGP--EADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL*AIFSLAAEHDFKLEGMDVDTAYLNAPVKEELFVQRPHEFSPFSRHIPFVHRLYKTLYDLKLSGRNWNNTLDDIRAGTGLDRSITDPCLYFSHDKGGETDILVTVYVDDLDIVGRREKV 1632
            G  + + F+DDYSR      L+ K E + ++K++   +    G+     R+D  +E+  +     +   GI+  FSA YTPQQNG+AER  R + EM    ++ A +  R+W EA   A Y  NR P R   + TP+E   G  P L H+R+FG  AY  +   +RRK DD+A   + +GYD      R +      I +SR+V+  E+D        QE    +G +++E       +   + +S     RG   N E           N +   S+ E    S            +L+ A         P  + R+ K    G P + +S +       +P S  E  + P  E DKW AA +EE  +L     W+     +LP GRK I  KW+FK K + DG+I  YKARLVA+GFSQ  GED+ ET APV +  T+  + S+AA     +   DV  AYLN  + EEL++++P  F   S +   V RL +++Y LK S R WN    ++      DR+  D CLY   +  G T   V +YVDDL + G  E++
Sbjct:    8 GHRYMLTFIDDYSRFTFIRLLKTKDETVSVVKEYVAMMNTRFGRNPATFRTDNGREYVNQELQEFFRQKGIEHQFSAPYTPQQNGIAERKNRTLVEMAKSMLVDAKLPERFWGEAICTAAYLQNRLPNRSAEK-TPFELWTGKRPNLSHIRIFGSKAYSFVPQQKRRKWDDRAMQGILVGYDNATKGYRLLDPVTNRIWISRSVRIIEKDEQYVDFAVQETYMPEGAKELE-------LKKQIDKSIEPSSRGAEVNVE-----------NIFESPSQEEIEVSSNES---------LLSPA---------PRRSQRINK----GMPPQKLSYKVHTVEACEPSSWEEVTSLPPCERDKWIAAAKEEMASLKNRDVWELV---KLPAGRKVISSKWVFKIKRKADGAIDTYKARLVARGFSQRYGEDYDETFAPVLKHETIRMLLSIAAMRSLHVRHFDVKCAYLNGEIHEELYMEQPPGFVQ-SGNENLVLRLKRSIYGLKQSARAWNKKATEVLTSLDFDRANADLCLYIRRESTGGT-TYVLLYVDDLLVAGETEEI 521          
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: A0A1J3IBS4_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3IBS4_NOCCA)

HSP 1 Score: 246 bits (628), Expect = 5.670e-66
Identity = 182/567 (32.10%), Postives = 263/567 (46.38%), Query Frame = 1
Query:    7 GRHFAIIFVDDYSRMRKAYALRHKSEALWILKQFERDIAKANGQQIKHLRSDQRKEFTGESFGRVWA*NGIKQAFSAVYTPQQNGVAERSWRQVFEMI*GKMITADMCRRYWVEAARAAVYCLNRPPTRPHNRGTPYEKGHGTTPKLDHLRVFGWTAYGMLQ*PQRRKLDDKAWVRVFLGYDRH-----MYIPKKS-IQLSRNVKFDEEDFVIGHRGQQEHDGTRDMEGLLSAPSVTPAVSRSRARGVRGDVTNTEKPTSTSSAARANPYNDDSEGETRTESGTKEQRPRGRSPILTRARVRESCEEDPGATARVAKVEDTGNPTEVVSEEKPKSVAEALNGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL*AIFSLAAEHDFKLEGMDVDTAYLNAPVKEELFVQRPHEFSPFSRHIPFVHRLYKTLYDLKLSGRNWNNTLDDIRAGTGLDRSITDPCLYFSHDKGGETDILVTVYVDDLDIVGR-REKVDEFKHDLSLAFQDERAGL 1686
            G  + ++  DDYSRM   Y L  K EA  + K+F+  + K + QQ+K LR+D+  EFT   F +     GI    +  YTP+QNGVAER  R V EM    +   ++  ++W E+ R AVY LN  PT+     TPYE   G  P + HLRVFG  AY ++    R+KLDDK+   +FLGY        +Y P    I  SRNV FDEE       G        ++E ++   +    VS S      G   NT                                 P    P                A  +   +++            P    EA    E + WR A +EE  ++ +N TW+      LP G+ +I  KW+FK K   DGSI +YKARLV +G++Q  G D+ ET +PV R  T+  + +L A   + +   DV +A+LN  + EE++V +P  F    +   FV++L+K LY LK + R W N +D     +G +RS ++P LY      G+  ++V +YVDDL  +G     V +FK  +   F+    GL
Sbjct:   95 GSKYFLMLTDDYSRMSWVYFLETKGEAFTMFKKFKSLVEKQSEQQLKVLRTDRGGEFTSTEFNKFCESEGIHHELTTAYTPEQNGVAERKNRTVVEMARSMLKQKNLPNQFWAESVRTAVYLLNISPTKAVLNRTPYEAWCGRKPGVSHLRVFGSIAYSLIDAHNRKKLDDKSEKCIFLGYSSQSKGYRLYNPVSGKIIESRNVTFDEETVWRLREGDNG-----ELEEIVVDNNDEQVVSESPV----GSEANT---------------------------------PTNSVPNSXXXXXXXXXXXXSNAPQKFRSLQEIYEVQHAFFTSDPTMFTEAA---EKEDWRKAMDEEITSIEKNSTWQLV---ELPEGKHSIGVKWVFKTKYHADGSIQKYKARLVVKGYAQEYGVDYEETFSPVARFDTVRTLLALGAHMHWPIYQFDVKSAFLNGELLEEVYVDQPEGFVVRGKE-GFVYKLHKALYGLKQAPRAWYNKIDLFFVESGFERSRSEPTLYIKKQSEGDI-LIVCLYVDDLIYMGSCASLVADFKDSMMKKFEMSDLGL 611          
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: Q7XTU6_ORYSJ (OSJNBb0034I13.10 protein n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q7XTU6_ORYSJ)

HSP 1 Score: 248 bits (634), Expect = 1.630e-65
Identity = 191/579 (32.99%), Postives = 287/579 (49.57%), Query Frame = 1
Query:    7 GRHFAIIFVDDYSRMRKAYALRHKSEALWILKQFERDIAKANGQQIKHLRSDQRKEFTGESFGRVWA*NGIKQAFSAVYTPQQNGVAERSWRQVFEMI*GKMITADMCRRYWVEAARAAVYCLNRPPTRPHNRGTPYEKGHGTTPKLDHLRVFGWTAYGMLQ*PQRRKLDDKAWVRVFLGYDR-----HMYIP-KKSIQLSRNVKFDEEDFVIGHRGQQEHDGTRDMEGLLSAPSVTPAVSRSRARGVRGDVTNTEKPTSTSSAARANPYNDDSEGETRTESGTKEQRPRGRSPILTRARVRESCEEDPGATARVAKVEDTGNPTE-----------VVSEEKPKSVAEALNGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL*AIFSLAAEHDFKLEGMDVDTAYLNAPVKEELFVQRPHEFSPFSRHIPFVHRLYKTLYDLKLSGRNWNNTLDDIRAGTGLDRSITDPCLYFSHDKG-GETDILVTVYVDDLDIVGRREK-VDEFKHDLSLAFQDERAGL 1686
            GR + ++ VDD SR      L  K EA   +KQF+  +   +G++++ LR+D+  EFT   F       G+++  +A Y+PQQN V ER  + V       +  A +  R+W EA  AAVY LNR PT+  +  TPYE  HG  P ++HLRVFG   Y     P  RKLDD+    VF+GY++      MY P  + + +SR+V FDE         +   D   + E       V+P         V   V +  + T T   A  +P +          +G     PR  +          + E D G   R  +V+D  + TE           +++ E+P S  EA    + + WR A  EE R++ EN TW       LP G KAI  KW++K K +  G+I ++KARLVA+G+ Q +G DF E  APV RM T+  + +LAA+  +++  MDV +A+LN  ++EE++V +P  F     +   V +L K LY L+ + R WN  LD+       ++S T+  +Y    +G G++ ++V VYVDDL I G ++K +D FK  +   F     G 
Sbjct:  594 GRKYFLLLVDDMSRHMWIRLLSGKHEAATAIKQFQAGVELESGRKLRALRTDRGGEFTSVEFMDYCTDRGMRRELTAPYSPQQNRVVERRNQTVVAAARSMLKAAGLPARFWGEAVVAAVYVLNRSPTKALDGVTPYEAWHGRRPSVEHLRVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQGSKAYRMYDPVAQRVCVSRDVVFDE---TATWAWRDPEDAATEEEEFTVDFFVSP---------VAPSVADAGEQTGTPVQAGVSPVS----------TGVLSSPPRAPNGEFCTPPTSVTPETD-GGPVRYRRVQDILSTTEPVLDFDYSDQCLIATEEPTSFVEA---EKHECWRRAMVEELRSVEENQTWSL---AELPAGHKAIGLKWVYKLKKDPSGAIVKHKARLVAKGYVQQQGVDFDEVFAPVARMETVRLLVALAAQKGWEIHHMDVKSAFLNGELEEEVYVVQPPGFDD-KTNASKVLKLRKALYGLRQAPRAWNAKLDNTLLSLKFNKSATESAVYV---RGVGDSKLIVGVYVDDLIITGSQKKEIDAFKLQMKQRFNMSDLGF 1139          
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: A0A7D9I9A2_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9I9A2_PARCT)

HSP 1 Score: 243 bits (619), Expect = 1.660e-64
Identity = 184/562 (32.74%), Postives = 279/562 (49.64%), Query Frame = 1
Query:    7 GRHFAIIFVDDYSRMRKAYALRHKSEALWILKQFERDIAKANGQ--QIKHLRSDQRKEFTGESFGRVWA*NGIKQAFSAVYTPQQNGVAERSWRQVFEMI*GKMITADMCRRYWVEAARAAVYCLNRPPTRPHNRGTPYEKGHGTTPKLDHLRVFGWTAYGMLQ*PQRRKLDDKAWVRVFLGYDR-----HMY-IPKKSIQLSRNVKFDEE----------DFVIGHRGQQE----HDGTRDMEGLLSAPSVTPAVSRSRARGVRGD-VTNTEKPTSTSSAARANPYNDDSEGETRTESGTKEQRPRGRSPILTRARVRESCEEDPGATARVAKVEDTGNPT--EVVSE-EKPKSVAEALNGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL*AIFSLAAEHDFKLEGMDVDTAYLNAPVKEELFVQRPHEFSPFSRHIPFVHRLYKTLYDLKLSGRNWNNTLDDIRAGTGLDRSITDPCLYFSH---DKGGETDILVTVYVDDL 1605
            G  + + F DDYSR   AY ++ K EAL   K+F   +   NG   ++K LRSD   E+   SF +     GI Q F+  YTP+QNGVAER  R + E     +  A++   +W EA   AVY  NR PT      TP+E   G  P + +L+VFG   Y  +    RRKLD K++  +F+GY        +Y + ++   +SR+V+F E+          DFV   + + E       T ++  L     +            R D V  T    + +     NP ND+  GE+ T S +K    R    +     VR+            +K  D   P    + SE + P+SV  ALNG  A +W+ A   E+ +L+EN TW+   P      +  +  +W+ K K +EDGSI R+KAR+VAQG+SQ +G D+ E  +PV R ++L  + +LA E+D ++  MDV TA+LN  +  ++++Q+P  F    +   ++ +L K++Y LK S R WN+TLD      G  +S  D C+Y      D G  + +++ VYVDD+
Sbjct:   64 GSRYLVTFTDDYSRYAVAYFIKKKDEALTKFKEFVNYVENQNGNHNKVKILRSDNGGEYKSNSFSKFCTEKGIVQQFTCPYTPEQNGVAERLNRTILESARSMIYHANLPLVFWAEACNTAVYLHNRSPTVALKDKTPHECIFGEKPDVSNLKVFGCMCYVHIPDSNRRKLDQKSYEAIFVGYPTGTKGYKVYDVKRRKFMISRDVQFLEKKFHNFENPKNDFVFEQKERIEVPDDEKQTVELFDLDRVDELDDQTFNEDQDEFRVDPVVETNINLNETMEQPVNPENDEPVGESETLSTSKTYEERFMENVKNLGPVRQRM--------IPSKFRDNACPVVESLTSEVDDPESVQRALNGKYAKEWKDAMISEYSSLLENDTWELVPPC---DDQNVVGSRWVLKVKRKEDGSIDRFKARVVAQGYSQTKGADYDEVFSPVARHTSLRTLLALANEYDLEVHQMDVRTAFLNGDIDCDIYMQQPEGFVNPDKP-DYLCKLQKSIYGLKQSARCWNDTLDGYLKSRGYRKSGADGCIYVKSVKKDGGRISFVILGVYVDDI 613          
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: A0A1W7R6H7_AEDAL (Putative pol polyprotein (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6H7_AEDAL)

HSP 1 Score: 244 bits (622), Expect = 4.690e-64
Identity = 182/547 (33.27%), Postives = 274/547 (50.09%), Query Frame = 1
Query:    7 GRHFAIIFVDDYSRMRKAYALRHKSEALWILKQFERDIAKANGQQIKHLRSDQRKEFTGESFGRVWA*NGIKQAFSAVYTPQQNGVAERSWRQVFEMI*GKMITADMCRRYWVEAARAAVYCLNRPPTRPHNRGTPYEKGHGTTPKLDHLRVFGWTAYGMLQ*PQRRKLDDKAWVRVFLGY----DRHMYIPKKSIQL--SRNVKFDEEDFVIGHRGQQEHDGTRDMEGLLSAPSVTPAVSRSRARGVRGDVTNTEKPTSTSSAARANPYNDDSEGETRTESGTKEQRPRGRSPILTRARVRESCEEDPGATARVAKVEDTGNPTEVVSEEKPKSVAEALNGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL*AIFSLAAEHDFKLEGMDVDTAYLNAPVKEELFVQRPHEFSPFSRHIPFVHRLYKTLYDLKLSGRNWNNTLDDIRAGTGLDRSITDPCLYFSHDKGGETDILVTVYVDDLDIVGRREK 1629
            G  + +  +DD++R  K Y L+ K E    +++F +      G+    +RSD   E+  +  GR +   GI   ++A Y+PQQNG+AER  R + EM    +I A+M  R+W EA   A Y  N  PTR   + TPYE   G  P L H+++FG  A+  +   +  KLD KA    F+GY      + ++ + + +L  SR+ +F  E       G+       +  G +     TP  + S          N   PT        + + D SEGET + + +++        ++    +R S     G      KV    N        +P+S  EA+ GPE + W++A +EE  +  EN TW       LP GRK +  KWIFKRKL+E G++ARYKARLVAQGF+Q  G D+ E  APV +M T   + S+A + +  ++  DV TAYLN  ++E +++++P       +++  V +L K LY LK S R WN TLD + A      S+ DPCLY  ++KG      + VYVDD  +V + EK
Sbjct:  489 GIRYFMTMIDDFTRFTKVYFLKRKDEVPEKIQEFVQMAETRFGKTPAIIRSDSGGEYKSKHLGRFYRNKGITPQYTAAYSPQQNGIAERKNRTLVEMARCMLIEANMDVRFWAEAINTAAYIQNLLPTR-SIKSTPYEAWFGRKPDLKHVQMFGSQAFVHVPDQKWAKLDSKAVKLTFVGYADSQKAYRFVDQSTNKLTCSRDARFINE-------GKDLQIQAVERPGNIEIDLSTPKENGS----------NNPVPTFDDDE---DSFVDASEGETSSSAESEDD-------VVEINTLRRSNRSTKGVAPSRFKVGMAKNQLP-----EPRSFKEAVEGPECELWKSAIKEELMSHQENKTWDLVP---LPPGRKTVGCKWIFKRKLDEHGNVARYKARLVAQGFTQKFGTDYDEVYAPVVKMVTFRTLLSVATKRNMLIKHADVKTAYLNGELEELVYMRQPAGCEIGDKNL--VCKLRKGLYGLKQSARIWNKTLDKVLASLKFKPSVNDPCLYVRNEKGRTA--YLAVYVDDFVVVCKTEK 995          
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: A0A0N1ICY1_PAPMA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Papilio machaon TaxID=76193 RepID=A0A0N1ICY1_PAPMA)

HSP 1 Score: 244 bits (622), Expect = 4.910e-64
Identity = 174/585 (29.74%), Postives = 296/585 (50.60%), Query Frame = 1
Query:    1 FEGRHFAIIFVDDYSRMRKAYALRHKSEALWILKQFERDIAKANGQQIKHLRSDQRKEFTGESFGRVWA*NGIKQAFSAVYTPQQNGVAERSWRQVFEMI*GKMITADMCRRYWVEAARAAVYCLNRPPTRPHNRGTPYEKGHGTTPKLDHLRVFGWTAYGMLQ*PQRRKLDDKAWVRVFLGY----DRHMYI----PKKSIQLSRNVKFDEEDF---VIGHRGQQEHDGTRDM---EGLLSAPSVTPAVSRSRARGVRGDVTNTEKPTSTSSAARANPYNDDSEGETRTESGTKEQRPRGRSPILTRARVRESCEEDPGATARVAKVEDTGNPTEVVSEEKPKSVAEALNGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL*AIFSLAAEHDFKLEGMDVDTAYLNAPVKEELFVQRPHEFSPFSRHIPFVHRLYKTLYDLKLSGRNWNNTLDDIRAGTGLDRSITDPCLYFSHDKGGETDILVTVYVDDLDIVGRREKVD-EFKHDLSLAFQDERAGLPLARVGNR 1710
            F G  + + F+DDY+RM   Y +R+KSE L + K F++ +      +IK LR+D  +E+  + F      +GIK   +  Y+PQQNGVAER+ R + E     +  A + RR+W EA   A+Y  N+ P++     TP EK  G    L +LR FG  AY M+   +R+KLD K    +F+GY      +  I    P K I+ SR+V+F E      ++ ++G +  D   ++   E  L++  +   V+ +        V  +    S  ++A    + DD +  T              +P +T   +++S + D   +  VA               +P+++ +AL+GP+A+ WR A  +E+++  +N  W       LP G+KA++ KW+FK+KL  +G +  YKARLVA+GF+Q  G D+ ET +PV R ST+  + +LA   D  ++ MDV TA+LN  ++E +++ +P  +    +   +V +L K +Y LK + + W + +D         +++++PC+Y   D      I++ +YVDD+ I  +      + K +L   F+ +  G     +G R
Sbjct:  503 FSGAKYLLTFIDDYTRMTFGYFIRNKSEVLPVFKIFKKFVENQTNLKIKMLRTDNGREYVNKDFQLFLQEHGIKHQTTVPYSPQQNGVAERANRTIIEAGRCMLQEAGLDRRFWAEALNTAIYIKNKSPSKAVRGTTPEEKWSGNKVNLSNLRTFGCVAYAMIPNEKRKKLDAKCKQYIFVGYCSESKGYRLIDPENPSKCIK-SRDVQFLEGKMYKNLVLNKGNKTSDCELNISSNEDDLNSNDINDQVNPT-------SVIESSDSNSADTSASGCSFIDDPDDVTW-------------NPDMT---LQQSSDSDDTVSIAVAMT--------ACHNGEPQTIQDALSGPDAEHWRKAIADEYKSFEKNKAWNLT---LLPAGKKAVKCKWVFKKKLGSEGELLHYKARLVAKGFTQEYGIDYKETYSPVVRYSTIRTLIALAVNLDLYIDHMDVKTAFLNGDLRETVYMVQPDGYKVKGKE-NYVFKLNKAIYGLKQASKAWYDKIDSALTDLQFRKTLSEPCVYIRSDAPDNL-IILALYVDDILIFSKDSLAKTKLKEELMKKFEMKDLGRATHVLGMR 1050          
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: UPI0016589FE9 (uncharacterized protein LOC118514016 isoform X1 n=1 Tax=Anopheles stephensi TaxID=30069 RepID=UPI0016589FE9)

HSP 1 Score: 244 bits (622), Expect = 5.160e-64
Identity = 195/589 (33.11%), Postives = 297/589 (50.42%), Query Frame = 1
Query:    7 GRHFAIIFVDDYSRMRKAYALRHKSEALWILKQFERDIAKANGQQIKHLRSDQRKEFTGESFGRVWA*NGIKQAFSAVYTPQQNGVAERSWRQVFEMI*GKMITADMCRRYWVEAARAAVYCLNRPPTRPHNRGTPYEKGHGTTPKLDHLRVFGWTAYGMLQ*PQRRKLDDKAWVRVFLGYD------RHMYIPKKSIQLSRNVKFDEEDFVIGHRGQQEHDGTRDMEGLLSAPSVTPAVSRSRARGVRGDVTNTEKPTSTSSAARANPYNDDS-----------------EGETRTESGTKE---------QRPRGRSPILTRARVRESCEEDPGATARVAKV---EDTGNPTEVVSEEKPKSVAEALNGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL*AIFSLAAEHDFKLEGMDVDTAYLNAPVKEELFVQRPHEFSPFSRHIPFVHRLYKTLYDLKLSGRNWNNTLDDIRAGTGLDRSITDPCLYFSHDKGGETDILVTVYVDDLDIV-GRREKVDEFKHDLSLAF 1665
            G  + +  +DD+SR    Y L+ KSE    ++++ + +    G++ + +RSDQ  E+  ++  +  A  GIK  F+A Y+PQQNGVAER  R + EM    +  A M +R+W EA   A Y  NR P+   +R TP+E   G  P L +LR+FG   Y ++   +R+KLD KA    F+GY       R +      IQ+SR+V+F E    I    +++  G   +E     P+ +  +  S     +   TN    T++ S       +DD                       TE+G  E         +      P+++   VR S      ATA V      E+     E ++E  PK+  EA++GP++ +W++A  EE ++  ENGTW+      LP  RKAI  KWIFK K +EDG   RYKARLVAQGF Q  G D+    APV +  T   +  LA++     + +D+ TAYL+  +KEE+F+++P  F   S +   V RL++++Y LK + R WN  +DD+    G  +S  DPCLY   +K G++ I V +YVDD+ ++    E+  E  H L+L F
Sbjct:  487 GCRYYMTLIDDHSRYTFVYFLKKKSEVENKIREYVKLVQNQFGRKPRIIRSDQGGEYFSKALRKFCADEGIKMEFTAAYSPQQNGVAERKNRSLTEMGRCMLRDAGMHKRFWAEAVNTACYLQNRLPSAAVDR-TPFEIWFGKKPDLTNLRLFGCVGYVLIPSVKRKKLDVKAERMTFVGYSGEHKAYRMLNTKTGEIQISRDVRFLE----IDDGSKEQTYGDPKIE---DNPTESVEIEWSLDETKQEAKTNVANETTSESEFYGWDCSDDGWPRGFXXXXXXXXXXXXXXXXXTEAGAAEPEAVLDVIPEAMPAAVPVVSSTPVRRSQR----ATAGVPPARYDEEVYLAKECITE--PKTYKEAVSGPQSAEWKSAMAEEMQSHHENGTWEL---AELPPHRKAIGSKWIFKCKADEDGHFVRYKARLVAQGFCQKFGTDYDLVFAPVVKQITFRTMLVLASKRKMLTKHVDIKTAYLHGLLKEEIFMRQPQGFE--SGNPNEVCRLHRSIYGLKQAARVWNTKIDDVLKTMGFIQSTADPCLYI-REKAGKS-IFVLIYVDDVIVICNTEEEFSEVVHVLTLNF 1054          
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: A0A4Y2R9J3_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=4 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2R9J3_ARAVE)

HSP 1 Score: 243 bits (619), Expect = 5.300e-64
Identity = 181/564 (32.09%), Postives = 269/564 (47.70%), Query Frame = 1
Query:    7 GRHFAIIFVDDYSRMRKAYALRHKSEALWILKQFERDIAKANGQQIKHLRSDQRKEFTGESFGRVWA*NGIKQAFSAVYTPQQNGVAERSWRQVFEMI*GKMITADMCRRYWVEAARAAVYCLNRPPTRPHNRGTPYEKGHGTTPKLDHLRVFGWTAYGMLQ*PQRRKLDDKAWVRVFLGYDRH-----MYIPKKSIQLSRNVKFDEEDFVIGHRGQQEHDGTRDMEGLLSAPSVTPAVSRSRARGVRGDVTNTEKPTSTSSAARANPYNDDSEGETRTESGTKEQRPRGRSPILTRARVRESCEEDPGATARVAKVEDTGNPTEVVSEEKPKSVAEALNGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL*AIFSLAAEHDFKLEGMDVDTAYLNAPVKEELFVQRPHEFSPFSRHIPFVHRLYKTLYDLKLSGRNWNNTLDDIRAGTGLDRSITDPCLYFSHDKGGETDILVTVYVDDLDIVGRREKVDEFKHDLSLAFQDERAG 1683
            G+++ + FVDDYSR    Y L  K E L  LK++        G+ +K LRSD   E+ G+         GI    +  Y+PQQNGV+ER  R + EM    +  A++ +R+W EAA  A Y  NR PT+P  R TPYE      P L H+RVFG  AY  +Q  +R KLD KA   +FLGYD       +Y+    I +SR VKF E          +E     +    L    +    + S   G   + T              NP  DD +  + ++  T + R   RS   T+          P   A  A      NP  +   +    V +  N  E  KW  + +EE ++L +N TWK   P   P G+K I  +W FK K +  G+I RYKARLVAQGFSQ  G D+ ET APV   +T+    + AA  +  +  +D+ TA+L+  +++E+++ +P  +    +    V +L K +Y LK + R W+  + +     G ++S  DPCL+   + G    + + VYVDDL I G+ E + +   +L   ++ +  G
Sbjct:  451 GKYYILTFVDDYSRYSMIYLLSKKDEVLSKLKEYIAMTRNKFGRTLKVLRSDNGGEYIGKEIEDFLKEQGIVHQLTVPYSPQQNGVSERKNRTLIEMTRCLLSEANLPQRFWAEAAMTATYLQNRLPTKP-KRKTPYELWTNRKPNLSHIRVFGCKAYAYIQKQKRGKLDSKAIEGIFLGYDYRSKGYRIYLGDNKIMISRTVKFIENPPPYDKNEAKELQNQDETTQQLVELELEHEENHSMEEGEINERTE------------VNPCEDDGDELSNSQIQTSQHR---RSERKTKGIP-------PERFAFFA------NPERIKEPKSWNDVLKMENAYEKQKWIESTKEEMKSLQKNETWKLVTP---PSGKKVIGCRWTFKAKYDSKGNIERYKARLVAQGFSQKFGTDYDETFAPVVTYTTIRTFLAAAAYKNLNVTHVDIKTAFLHGNLEDEVYMSQPEGYIEAGQEQK-VCKLNKAIYGLKQAARAWHLKIGESLIKYGFEQSKADPCLFKFANNGNP--MYIIVYVDDLLIAGKEEDIRKIIKELEEEYELKNLG 979          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2M4CK12_ANODA7.430e-6732.46Putative pol polyprotein (Fragment) n=1 Tax=Anophe... [more]
A0A6A2WSU7_HIBSY1.670e-6632.44Integrase catalytic domain-containing protein n=2 ... [more]
A0A5S6QM97_TRIMR2.010e-6632.50Integrase catalytic domain-containing protein n=2 ... [more]
A0A1J3IBS4_NOCCA5.670e-6632.10Retrovirus-related Pol polyprotein from transposon... [more]
Q7XTU6_ORYSJ1.630e-6532.99OSJNBb0034I13.10 protein n=2 Tax=Oryza sativa subs... [more]
A0A7D9I9A2_PARCT1.660e-6432.74Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A1W7R6H7_AEDAL4.690e-6433.27Putative pol polyprotein (Fragment) n=1 Tax=Aedes ... [more]
A0A0N1ICY1_PAPMA4.910e-6429.74Retrovirus-related Pol polyprotein from transposon... [more]
UPI0016589FE95.160e-6433.11uncharacterized protein LOC118514016 isoform X1 n=... [more]
A0A4Y2R9J3_ARAVE5.300e-6432.09Retrovirus-related Pol polyprotein from transposon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14260contigH-paniculata_contig14260:3812..6483 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score102.4
Seed ortholog evalue2.9e-19
Seed eggNOG ortholog4538.ORGLA04G0228900.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs37YYP@33090,3GQD7@35493,3IKKZ@38820,3M3FD@4447,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPoales
Best eggNOG OGNA|NA|NA
Exons3
Model size2396
Cds size720
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14260.2584.1prot_H-paniculata_contig14260.2584.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig14260 4370..5155 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929135.4590325-UTR-H-paniculata_contig14260:3811..43691622929135.4590325-UTR-H-paniculata_contig14260:3811..4369Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14260 3812..4369 +
1691480744.8400598-UTR-H-paniculata_contig14260:3811..43691691480744.8400598-UTR-H-paniculata_contig14260:3811..4369Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14260 3812..4369 +
1622929135.509049-UTR-H-paniculata_contig14260:5155..56311622929135.509049-UTR-H-paniculata_contig14260:5155..5631Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14260 5156..5631 +
1691480744.8672383-UTR-H-paniculata_contig14260:5155..56311691480744.8672383-UTR-H-paniculata_contig14260:5155..5631Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14260 5156..5631 +
1622929135.5215645-UTR-H-paniculata_contig14260:5841..64831622929135.5215645-UTR-H-paniculata_contig14260:5841..6483Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14260 5842..6483 +
1691480744.882806-UTR-H-paniculata_contig14260:5841..64831691480744.882806-UTR-H-paniculata_contig14260:5841..6483Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14260 5842..6483 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929135.4777958-CDS-H-paniculata_contig14260:4369..46241622929135.4777958-CDS-H-paniculata_contig14260:4369..4624Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14260 4370..4624 +
1691480744.849492-CDS-H-paniculata_contig14260:4369..46241691480744.849492-CDS-H-paniculata_contig14260:4369..4624Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14260 4370..4624 +
1622929135.4948447-CDS-H-paniculata_contig14260:4690..51551622929135.4948447-CDS-H-paniculata_contig14260:4690..5155Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14260 4691..5155 +
1691480744.8575191-CDS-H-paniculata_contig14260:4690..51551691480744.8575191-CDS-H-paniculata_contig14260:4690..5155Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14260 4691..5155 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig14260.2584.1

>prot_H-paniculata_contig14260.2584.1 ID=prot_H-paniculata_contig14260.2584.1|Name=mRNA_H-paniculata_contig14260.2584.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=240bp
MYIPKKSIQLSRNVKFDEEDFVIGHRGQQEHDGTRDMEGLLSAPSVTPAV
SRSRARGVRGDVTNTEKPTSTSSAARANPYNDDSEGETRTESGTKEQRPR
GRSPILTRARVRESCEEDPGATARVAKVEDTGNPTEVVSEEKPKSVAEAL
NGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKL
EEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL*
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mRNA from alignment at H-paniculata_contig14260:3812..6483+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig14260.2584.1 ID=mRNA_H-paniculata_contig14260.2584.1|Name=mRNA_H-paniculata_contig14260.2584.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2672bp|location=Sequence derived from alignment at H-paniculata_contig14260:3812..6483+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTCGAGGGACGCCATTTCGCCATTATCTTCGTGGACGACTACAGTCGAAT GCGTAAGGCCTATGCCCTTAGGCACAAATCAGAGGCGTTATGGATTCTGA AACAGTTCGAGCGGGATATCGCGAAGGCAAACGGGCAACAAATAAAACAT CTTCGGTCAGATCAAAGAAAGGAGTTTACAGGAGAATCGTTCGGACGGGT TTGGGCCTAAAATGGCATAAAGCAAGCATTTTCTGCCGTCTACACGCCGC AGCAAAATGGTGTGGCGGAGCGCAGCTGGCGTCAGGTTTTCGAGATGATC TGAGGTAAGATGATAACCGCCGACATGTGTCGCAGGTATTGGGTTGAGGC GGCGCGCGCGGCTGTGTACTGCTTAAATCGCCCCCCGACGCGACCGCATA ACCGAGGGACGCCGTATGAGAAAGGGCACGGTACAACACCAAAGCTTGAC CACCTTCGTGTCTTCGGCTGGACGGCGTACGGGATGTTACAGTAGCCGCA GAGACGAAAACTCGATGACAAAGCATGGGTAAGGGTGTTTCTAGGGTATG ATAGGCACATGTATATCCCGAAAAAGAGCATCCAGTTGAGCAGGAATGTA AAATTTGATGAAGAGGACTTCGTAATCGGTCATCGCGGACAGCAGGAACA CGACGGGACGCGAGACATGGAAGGCCTGCTTTCAGCACCGTCGGTCACAC CAGCGGTCTCGCGATCTCGCGCCCGAGGCGTGCGAGGAGACGTAACCAAC ACGGAAAAACCGACGTCAACGTCGTCAGCTGCCAGAGCTAACCCGTACAA TGATGACTCGGAGGTGTACCATGCTCAACCAAGAGCCGAAGATACATAAT CGGCGGGGACTTGTGCACCCACATTTCAGGGGGAGACCAGGACAGAGTCA GGGACAAAGGAGCAGCGACCGCGGGGTCGGTCACCAATACTGACTCGGGC AAGAGTGAGGGAAAGCTGCGAAGAGGATCCAGGCGCTACCGCGCGCGTGG CTAAGGTGGAAGATACCGGCAACCCTACAGAGGTGGTATCTGAGGAAAAG CCGAAATCTGTGGCAGAAGCATTAAACGGCCCAGAGGCAGATAAATGGCG TGCGGCGGAGGAGGAGGAATGGCGGGCGTTGGTGGAAAATGGAACATGGA AAAGCGAAGGCCCGGGGAGGTTACCGGTAGGGCGAAAGGCGATTCGTAGA AAATGGATTTTCAAGCGGAAACTGGAGGAGGACGGCAGCATAGCACGCTA CAAAGCGCGACTGGTGGCTCAAGGCTTTTCACAGGTGGAGGGTGAAGATT TCTTTGAAACCAGTGCCCCCGTAACTCGCATGTCGACGTTATGAGCTATT TTTAGCCTGGCCGCCGAGCACGATTTCAAATTAGAAGGCATGGACGTAGA TACGGCGTATTTGAACGCCCCGGTAAAAGAAGAGCTGTTTGTTCAACGAC CCCACGAGTTTTCCCCTTTCTCCCGACACATACCATTTGTGCACCGCCTG TATAAAACCCTGTATGACCTCAAGCTGAGTGGCCGAAACTGGAATAACAC TCTTGACGACATTCGTGCTGGGACAGGACTCGACCGTTCCATTACCGACC CATGCTTGTACTTCTCTCACGACAAAGGGGGAGAAACAGACATTCTTGTG ACCGTGTATGTTGACGATCTAGACATTGTCGGACGTCGTGAGAAAGTAGA CGAGTTCAAGCACGACCTAAGTCTGGCGTTTCAGGATGAAAGAGCTGGCC TCCCTCTCGCGCGTGTTGGGAATAGAAGTACGACGTGACCGCCTCAATGG TATTGTATCAACATCTCAAGGTGGCTAGATCTGCGAGGTACTGGAATAAT ACAGTTTTGACGAGTGTCGAGGCCTGCCGACCGCTGTAGAGGGAAAGGTG AAGATTTTGGCACCCAAGTCCGTTGACAAGTCCCCCGAATCGAACCCCCT TGGGGCTGTACTGCTGGAAATAGGAGCAGGAATACAAGAAAGCAGTAGCA GAAGAACTGCCAACTCAAATGAATAGAGAGGCATGATAGGATCACTCACG TACGCCTCGGCAGGAACTAGACCTGATATAGCACACGCGGTACACCAAGC AGCACGTCGTATGGGAGGACTCATCTGGGGAATACTTCAGTATATGCAAG CGCAGTTTTCATCAAGTCAATACCATGCCTGACCTCGGCACTACGTTCGG TGATAGGGGTTATGGTCAAAATCTTGAAGGACTCGTTGATGACGATTAGG CGGAAGATGCCGAGGACCCAAAGTCCACAAAAGGATACGTATTCAAGCTG AACGGTGGTACGATAAGTTGGTGCTCTAGAAAGCAACAGTTAGTCACGTG GTCCAATAAAAAGGCAGAGTACATTACTGCAGGAAAAGCGAGAAAGGAGA CGGTATATCTTAGGGATTTACTAGGGTCGATAGGTTGCGGATGCAGGAGG GACACGACATTGTTTGAGGAGAATAAATCAGCTATTAATTTCAGTAAGGG GTCTGGCGAACACTGCAGGACAAAGCACATCGGAGTGTGCTGGCACGGAA TTCGAGAGTGGATTCGGGAAGGAGTATTTGCGTTGAAAAAGGTGCAGACC GGCGACCAACTCACTGACATTTTAACGAAAGGTCTGAGCAGTCTAAAGTT TCAGAGACTGAGAAATTCACTC
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Coding sequence (CDS) from alignment at H-paniculata_contig14260:3812..6483+

>mRNA_H-paniculata_contig14260.2584.1 ID=mRNA_H-paniculata_contig14260.2584.1|Name=mRNA_H-paniculata_contig14260.2584.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1440bp|location=Sequence derived from alignment at H-paniculata_contig14260:3812..6483+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTATATCCCGAAAAAGAGCATCCAGTTGAGCAGGAATGTAAAATTTGA
TGAAGAGGACTTCGTAATCGGTCATCGCGGACAGCAGGAACACGACGGGA
CGCGAGACATGGAAGGCCTGCTTTCAGCACCGTCGGTCACACCAGCGGTC
TCGCGATCTCGCGCCCGAGGCGTGCGAGGAGACGTAACCAACACGGAAAA
ACCGACGTCAACGTCGTCAGCTGCCAGAGCTAACCCGTACAATGATGACT
CGGAGATGTATATCCCGAAAAAGAGCATCCAGTTGAGCAGGAATGTAAAA
TTTGATGAAGAGGACTTCGTAATCGGTCATCGCGGACAGCAGGAACACGA
CGGGACGCGAGACATGGAAGGCCTGCTTTCAGCACCGTCGGTCACACCAG
CGGTCTCGCGATCTCGCGCCCGAGGCGTGCGAGGAGACGTAACCAACACG
GAAAAACCGACGTCAACGTCGTCAGCTGCCAGAGCTAACCCGTACAATGA
TGACTCGGAGGGGGAGACCAGGACAGAGTCAGGGACAAAGGAGCAGCGAC
CGCGGGGTCGGTCACCAATACTGACTCGGGCAAGAGTGAGGGAAAGCTGC
GAAGAGGATCCAGGCGCTACCGCGCGCGTGGCTAAGGTGGAAGATACCGG
CAACCCTACAGAGGTGGTATCTGAGGAAAAGCCGAAATCTGTGGCAGAAG
CATTAAACGGCCCAGAGGCAGATAAATGGCGTGCGGCGGAGGAGGAGGAA
TGGCGGGCGTTGGTGGAAAATGGAACATGGAAAAGCGAAGGCCCGGGGAG
GTTACCGGTAGGGCGAAAGGCGATTCGTAGAAAATGGATTTTCAAGCGGA
AACTGGAGGAGGACGGCAGCATAGCACGCTACAAAGCGCGACTGGTGGCT
CAAGGCTTTTCACAGGTGGAGGGTGAAGATTTCTTTGAAACCAGTGCCCC
CGTAACTCGCATGTCGACGTTATGAGGGGAGACCAGGACAGAGTCAGGGA
CAAAGGAGCAGCGACCGCGGGGTCGGTCACCAATACTGACTCGGGCAAGA
GTGAGGGAAAGCTGCGAAGAGGATCCAGGCGCTACCGCGCGCGTGGCTAA
GGTGGAAGATACCGGCAACCCTACAGAGGTGGTATCTGAGGAAAAGCCGA
AATCTGTGGCAGAAGCATTAAACGGCCCAGAGGCAGATAAATGGCGTGCG
GCGGAGGAGGAGGAATGGCGGGCGTTGGTGGAAAATGGAACATGGAAAAG
CGAAGGCCCGGGGAGGTTACCGGTAGGGCGAAAGGCGATTCGTAGAAAAT
GGATTTTCAAGCGGAAACTGGAGGAGGACGGCAGCATAGCACGCTACAAA
GCGCGACTGGTGGCTCAAGGCTTTTCACAGGTGGAGGGTGAAGATTTCTT
TGAAACCAGTGCCCCCGTAACTCGCATGTCGACGTTATGA
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