mRNA_H-paniculata_contig14260.2584.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: A0A2M4CK12_ANODA (Putative pol polyprotein (Fragment) n=1 Tax=Anopheles darlingi TaxID=43151 RepID=A0A2M4CK12_ANODA) HSP 1 Score: 247 bits (631), Expect = 7.430e-67 Identity = 186/573 (32.46%), Postives = 285/573 (49.74%), Query Frame = 1 Query: 4 EGRHFAIIFVDDYSRMRKAYALRHKSEALWILKQFERDIAKANGQQIKHLRSDQRKEFTGESFGRVWA*NGIKQAFSAVYTPQQNGVAERSWRQVFEMI*GKMITADMCRRYWVEAARAAVYCLNRPPTRPHNRGTPYEKGHGTTPKLDHLRVFGWTAYGMLQ*PQRRKLDDKAWVRVFLGYD------RHMYIPKKSIQLSRNVKFDEE---DFVIGHRGQQEHDGTRDMEGLLSAPSVTPAVSRSRARGVRGDVTNTEKPTSTSSAARANPYNDDSEGETRTESGTKEQRPRGRSPILTRARVRE-SCEEDPGATARVAKVEDTGNPTE-----VVSE--EKPKSVAEALNGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL*AIFSLAAEHDFKLEGMDVDTAYLNAPVKEELFVQRPHEFSPFSRHIPFVHRLYKTLYDLKLSGRNWNNTLDDIRAGTGLDRSITDPCLYFSHDKGGETDILVTVYVDDLDIV-GRREKVDEFKHDLSLAFQ 1668 +G + + +DD+SR Y L+ KSE + + + + K +RSDQ E++ ++ + GIK ++A Y+PQQNGVAER R + EM+ + A + ++YW EA AVY N PT+P N TPYE HG PK++HLR+FG A+ + +R+KL A FLGY R + I +SR+VKF E+ H + H + E ++ D T E NP +++ E + +E TR V E + +P + R K G P + V+ E+P + +EA+ E+ WRAA +EE AL N TW+ RLP+GRKA+ KW +KRK E+G I RYKARLVAQG+SQ G+D+ E APV R +T I +LA++ + ++ +D+ AYL+A ++E++++++P F++ V L K+LY LK S R WN +D + ++ D CLY +G + IL+ YVDD+ V +E+ +E + L F+ Sbjct: 53 QGYKYFMTMIDDFSRHCTIYFLKEKSEVTTKIMDYVKMAKTQFRKTPKAIRSDQGGEYSSKNLQDFYKREGIKPQYTASYSPQQNGVAERKNRSLIEMVRCMLFDAQLEQKYWAEAMNTAVYLQNISPTKPRNN-TPYETWHGVKPKVNHLRIFGCDAWAHIPKAKRKKLGATAQKLTFLGYSYDHKAYRLLDKTTNEIHISRDVKFIEKAPCSERAKHDRETRHQSKKPQEIII-------------------DTTLKE-----------NPITIETQAEPEVQPAFEE----------TREIVSEIDSDTEPRRSTRPTK----GIPPDRLMANVIKHQIEQPHTYSEAIESTESTAWRAAMQEEINALQGNDTWELV---RLPLGRKAVGCKWTYKRKENENGEIVRYKARLVAQGYSQKFGQDYDEVFAPVIRQATFRTILTLASKQNMIVKHLDIKNAYLHAELQEDIYMKQP---PGFTKGNDLVCHLKKSLYGLKQSARAWNAKIDRVLKEMQFQQAEADQCLYIRTHEGKQDYILI--YVDDIVAVYNTKEEYEELRKRLEQHFK 572
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: A0A6A2WSU7_HIBSY (Integrase catalytic domain-containing protein n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WSU7_HIBSY) HSP 1 Score: 251 bits (640), Expect = 1.670e-66 Identity = 182/561 (32.44%), Postives = 285/561 (50.80%), Query Frame = 1 Query: 7 GRHFAIIFVDDYSRMRKAYALRHKSEALWILKQFERDIAKANGQQIKHLRSDQRKEFTGESFGRVWA*NGIKQAFSAVYTPQQNGVAERSWRQVFEMI*GKMITADMCRRYWVEAARAAVYCLNRPPTRPHNRGTPYEKGHGTTPKLDHLRVFGWTAYGMLQ*PQRRKLDDKAWVRVFLGYDRH-----MYIP-KKSIQLSRNVKFDEEDFVIGHRGQQEHDGTRDMEGLLSAPSVTPAVSRSRARGVRGDVTNTEKPTSTSSAARANPYNDDSEGETRTESGTKEQRPRGRSPILTRARVRESCEEDPGATARVAKVEDTGNPTEVVSEEKPKSVAEALNGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL*AIFSLAAEHDFKLEGMDVDTAYLNAPVKEELFVQRPHEFSPFSRHIPFVHRLYKTLYDLKLSGRNWNNTLDDIRAGTGLDRSITDPCLYFSHDKGGETDILVTVYVDDLDIVGRREKV-DEFKHDLSLAFQ 1668 G + + F+DD+SR Y L+ KSEAL LK+F+ K +GQ +K LRSD+ E+T + F +GI +A YTPQQNGVAER R + +M + + R +W EA R AVY LNR PT+ TP E G P + H ++FG AY + R+KLDD+ +F+GYD +Y P K I +SR+V+FDE D+ R +E + +EGL +++ + N +S+SS A +N D T + T+E+R R V C ++ P + EA+ E DKWR A +EE ++ N TW+ R P G I KW++K K+ ++G++ +YKARLV +G+ Q +G D+ E APV R+ T+ + ++A + +K+ MDV +A+LN ++EE+++++P + H V+RL K LY LK + R WN +D+ G +S + LY ++ G+ ++V +YVDD+ G + ++FK ++ F+ Sbjct: 408 GNRYYLTFIDDFSRKCWIYILKEKSEALEKLKEFKAMAEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTARYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHFKIFGCIAYAHVPEHTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKIIISRDVEFDEADYW---RWSEEE---KKVEGLFFEDKDGDLINQDEQADDQDPRQNLPSSSSSSSDA-SNIIEDPEAPPTELQRSTRERRMPERYNDYELNNVSLFC---------------------LLVNSDPITYEEAV---EDDKWRNAMDEEIASIERNDTWELT---RQPEGHNPIGVKWVYKTKINKEGNVEKYKARLVVKGYKQRQGIDYDEVFAPVARIETIRLLTAVATQKGWKIYQMDVKSAFLNGYLEEEVYIEQPPGYIR-KGHEDKVYRLKKALYGLKQAPRAWNTRIDEYFQRNGFMKSPYEHALYTKKNEDGDI-MIVCLYVDDMIFTGNNPGMFNDFKKAMTKEFE 932
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: A0A5S6QM97_TRIMR (Integrase catalytic domain-containing protein n=2 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QM97_TRIMR) HSP 1 Score: 240 bits (612), Expect = 2.010e-66 Identity = 182/560 (32.50%), Postives = 268/560 (47.86%), Query Frame = 1 Query: 7 GRHFAIIFVDDYSRMRKAYALRHKSEALWILKQFERDIAKANGQQIKHLRSDQRKEFTGESFGRVWA*NGIKQAFSAVYTPQQNGVAERSWRQVFEMI*GKMITADMCRRYWVEAARAAVYCLNRPPTRPHNRGTPYEKGHGTTPKLDHLRVFGWTAYGMLQ*PQRRKLDDKAWVRVFLGYD------RHMYIPKKSIQLSRNVKFDEEDFVIGHRGQQEH---DGTRDMEGLLSAPSVTPAVSRSRARGVRGDVTNTEKPTSTSSAARANPYNDDSEGETRTESGTKEQRPRGRSPILTRARVRESCEEDPGATARVAKVEDTGNPTEVVSEE-------KPKSVAEALNGP--EADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL*AIFSLAAEHDFKLEGMDVDTAYLNAPVKEELFVQRPHEFSPFSRHIPFVHRLYKTLYDLKLSGRNWNNTLDDIRAGTGLDRSITDPCLYFSHDKGGETDILVTVYVDDLDIVGRREKV 1632 G + + F+DDYSR L+ K E + ++K++ + G+ R+D +E+ + + GI+ FSA YTPQQNG+AER R + EM ++ A + R+W EA A Y NR P R + TP+E G P L H+R+FG AY + +RRK DD+A + +GYD R + I +SR+V+ E+D QE +G +++E + + +S RG N E N + S+ E S +L+ A P + R+ K G P + +S + +P S E + P E DKW AA +EE +L W+ +LP GRK I KW+FK K + DG+I YKARLVA+GFSQ GED+ ET APV + T+ + S+AA + DV AYLN + EEL++++P F S + V RL +++Y LK S R WN ++ DR+ D CLY + G T V +YVDDL + G E++ Sbjct: 8 GHRYMLTFIDDYSRFTFIRLLKTKDETVSVVKEYVAMMNTRFGRNPATFRTDNGREYVNQELQEFFRQKGIEHQFSAPYTPQQNGIAERKNRTLVEMAKSMLVDAKLPERFWGEAICTAAYLQNRLPNRSAEK-TPFELWTGKRPNLSHIRIFGSKAYSFVPQQKRRKWDDRAMQGILVGYDNATKGYRLLDPVTNRIWISRSVRIIEKDEQYVDFAVQETYMPEGAKELE-------LKKQIDKSIEPSSRGAEVNVE-----------NIFESPSQEEIEVSSNES---------LLSPA---------PRRSQRINK----GMPPQKLSYKVHTVEACEPSSWEEVTSLPPCERDKWIAAAKEEMASLKNRDVWELV---KLPAGRKVISSKWVFKIKRKADGAIDTYKARLVARGFSQRYGEDYDETFAPVLKHETIRMLLSIAAMRSLHVRHFDVKCAYLNGEIHEELYMEQPPGFVQ-SGNENLVLRLKRSIYGLKQSARAWNKKATEVLTSLDFDRANADLCLYIRRESTGGT-TYVLLYVDDLLVAGETEEI 521
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: A0A1J3IBS4_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3IBS4_NOCCA) HSP 1 Score: 246 bits (628), Expect = 5.670e-66 Identity = 182/567 (32.10%), Postives = 263/567 (46.38%), Query Frame = 1 Query: 7 GRHFAIIFVDDYSRMRKAYALRHKSEALWILKQFERDIAKANGQQIKHLRSDQRKEFTGESFGRVWA*NGIKQAFSAVYTPQQNGVAERSWRQVFEMI*GKMITADMCRRYWVEAARAAVYCLNRPPTRPHNRGTPYEKGHGTTPKLDHLRVFGWTAYGMLQ*PQRRKLDDKAWVRVFLGYDRH-----MYIPKKS-IQLSRNVKFDEEDFVIGHRGQQEHDGTRDMEGLLSAPSVTPAVSRSRARGVRGDVTNTEKPTSTSSAARANPYNDDSEGETRTESGTKEQRPRGRSPILTRARVRESCEEDPGATARVAKVEDTGNPTEVVSEEKPKSVAEALNGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL*AIFSLAAEHDFKLEGMDVDTAYLNAPVKEELFVQRPHEFSPFSRHIPFVHRLYKTLYDLKLSGRNWNNTLDDIRAGTGLDRSITDPCLYFSHDKGGETDILVTVYVDDLDIVGR-REKVDEFKHDLSLAFQDERAGL 1686 G + ++ DDYSRM Y L K EA + K+F+ + K + QQ+K LR+D+ EFT F + GI + YTP+QNGVAER R V EM + ++ ++W E+ R AVY LN PT+ TPYE G P + HLRVFG AY ++ R+KLDDK+ +FLGY +Y P I SRNV FDEE G ++E ++ + VS S G NT P P A + +++ P EA E + WR A +EE ++ +N TW+ LP G+ +I KW+FK K DGSI +YKARLV +G++Q G D+ ET +PV R T+ + +L A + + DV +A+LN + EE++V +P F + FV++L+K LY LK + R W N +D +G +RS ++P LY G+ ++V +YVDDL +G V +FK + F+ GL Sbjct: 95 GSKYFLMLTDDYSRMSWVYFLETKGEAFTMFKKFKSLVEKQSEQQLKVLRTDRGGEFTSTEFNKFCESEGIHHELTTAYTPEQNGVAERKNRTVVEMARSMLKQKNLPNQFWAESVRTAVYLLNISPTKAVLNRTPYEAWCGRKPGVSHLRVFGSIAYSLIDAHNRKKLDDKSEKCIFLGYSSQSKGYRLYNPVSGKIIESRNVTFDEETVWRLREGDNG-----ELEEIVVDNNDEQVVSESPV----GSEANT---------------------------------PTNSVPNSXXXXXXXXXXXXSNAPQKFRSLQEIYEVQHAFFTSDPTMFTEAA---EKEDWRKAMDEEITSIEKNSTWQLV---ELPEGKHSIGVKWVFKTKYHADGSIQKYKARLVVKGYAQEYGVDYEETFSPVARFDTVRTLLALGAHMHWPIYQFDVKSAFLNGELLEEVYVDQPEGFVVRGKE-GFVYKLHKALYGLKQAPRAWYNKIDLFFVESGFERSRSEPTLYIKKQSEGDI-LIVCLYVDDLIYMGSCASLVADFKDSMMKKFEMSDLGL 611
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: Q7XTU6_ORYSJ (OSJNBb0034I13.10 protein n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q7XTU6_ORYSJ) HSP 1 Score: 248 bits (634), Expect = 1.630e-65 Identity = 191/579 (32.99%), Postives = 287/579 (49.57%), Query Frame = 1 Query: 7 GRHFAIIFVDDYSRMRKAYALRHKSEALWILKQFERDIAKANGQQIKHLRSDQRKEFTGESFGRVWA*NGIKQAFSAVYTPQQNGVAERSWRQVFEMI*GKMITADMCRRYWVEAARAAVYCLNRPPTRPHNRGTPYEKGHGTTPKLDHLRVFGWTAYGMLQ*PQRRKLDDKAWVRVFLGYDR-----HMYIP-KKSIQLSRNVKFDEEDFVIGHRGQQEHDGTRDMEGLLSAPSVTPAVSRSRARGVRGDVTNTEKPTSTSSAARANPYNDDSEGETRTESGTKEQRPRGRSPILTRARVRESCEEDPGATARVAKVEDTGNPTE-----------VVSEEKPKSVAEALNGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL*AIFSLAAEHDFKLEGMDVDTAYLNAPVKEELFVQRPHEFSPFSRHIPFVHRLYKTLYDLKLSGRNWNNTLDDIRAGTGLDRSITDPCLYFSHDKG-GETDILVTVYVDDLDIVGRREK-VDEFKHDLSLAFQDERAGL 1686 GR + ++ VDD SR L K EA +KQF+ + +G++++ LR+D+ EFT F G+++ +A Y+PQQN V ER + V + A + R+W EA AAVY LNR PT+ + TPYE HG P ++HLRVFG Y P RKLDD+ VF+GY++ MY P + + +SR+V FDE + D + E V+P V V + + T T A +P + +G PR + + E D G R +V+D + TE +++ E+P S EA + + WR A EE R++ EN TW LP G KAI KW++K K + G+I ++KARLVA+G+ Q +G DF E APV RM T+ + +LAA+ +++ MDV +A+LN ++EE++V +P F + V +L K LY L+ + R WN LD+ ++S T+ +Y +G G++ ++V VYVDDL I G ++K +D FK + F G Sbjct: 594 GRKYFLLLVDDMSRHMWIRLLSGKHEAATAIKQFQAGVELESGRKLRALRTDRGGEFTSVEFMDYCTDRGMRRELTAPYSPQQNRVVERRNQTVVAAARSMLKAAGLPARFWGEAVVAAVYVLNRSPTKALDGVTPYEAWHGRRPSVEHLRVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQGSKAYRMYDPVAQRVCVSRDVVFDE---TATWAWRDPEDAATEEEEFTVDFFVSP---------VAPSVADAGEQTGTPVQAGVSPVS----------TGVLSSPPRAPNGEFCTPPTSVTPETD-GGPVRYRRVQDILSTTEPVLDFDYSDQCLIATEEPTSFVEA---EKHECWRRAMVEELRSVEENQTWSL---AELPAGHKAIGLKWVYKLKKDPSGAIVKHKARLVAKGYVQQQGVDFDEVFAPVARMETVRLLVALAAQKGWEIHHMDVKSAFLNGELEEEVYVVQPPGFDD-KTNASKVLKLRKALYGLRQAPRAWNAKLDNTLLSLKFNKSATESAVYV---RGVGDSKLIVGVYVDDLIITGSQKKEIDAFKLQMKQRFNMSDLGF 1139
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: A0A7D9I9A2_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9I9A2_PARCT) HSP 1 Score: 243 bits (619), Expect = 1.660e-64 Identity = 184/562 (32.74%), Postives = 279/562 (49.64%), Query Frame = 1 Query: 7 GRHFAIIFVDDYSRMRKAYALRHKSEALWILKQFERDIAKANGQ--QIKHLRSDQRKEFTGESFGRVWA*NGIKQAFSAVYTPQQNGVAERSWRQVFEMI*GKMITADMCRRYWVEAARAAVYCLNRPPTRPHNRGTPYEKGHGTTPKLDHLRVFGWTAYGMLQ*PQRRKLDDKAWVRVFLGYDR-----HMY-IPKKSIQLSRNVKFDEE----------DFVIGHRGQQE----HDGTRDMEGLLSAPSVTPAVSRSRARGVRGD-VTNTEKPTSTSSAARANPYNDDSEGETRTESGTKEQRPRGRSPILTRARVRESCEEDPGATARVAKVEDTGNPT--EVVSE-EKPKSVAEALNGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL*AIFSLAAEHDFKLEGMDVDTAYLNAPVKEELFVQRPHEFSPFSRHIPFVHRLYKTLYDLKLSGRNWNNTLDDIRAGTGLDRSITDPCLYFSH---DKGGETDILVTVYVDDL 1605 G + + F DDYSR AY ++ K EAL K+F + NG ++K LRSD E+ SF + GI Q F+ YTP+QNGVAER R + E + A++ +W EA AVY NR PT TP+E G P + +L+VFG Y + RRKLD K++ +F+GY +Y + ++ +SR+V+F E+ DFV + + E T ++ L + R D V T + + NP ND+ GE+ T S +K R + VR+ +K D P + SE + P+SV ALNG A +W+ A E+ +L+EN TW+ P + + +W+ K K +EDGSI R+KAR+VAQG+SQ +G D+ E +PV R ++L + +LA E+D ++ MDV TA+LN + ++++Q+P F + ++ +L K++Y LK S R WN+TLD G +S D C+Y D G + +++ VYVDD+ Sbjct: 64 GSRYLVTFTDDYSRYAVAYFIKKKDEALTKFKEFVNYVENQNGNHNKVKILRSDNGGEYKSNSFSKFCTEKGIVQQFTCPYTPEQNGVAERLNRTILESARSMIYHANLPLVFWAEACNTAVYLHNRSPTVALKDKTPHECIFGEKPDVSNLKVFGCMCYVHIPDSNRRKLDQKSYEAIFVGYPTGTKGYKVYDVKRRKFMISRDVQFLEKKFHNFENPKNDFVFEQKERIEVPDDEKQTVELFDLDRVDELDDQTFNEDQDEFRVDPVVETNINLNETMEQPVNPENDEPVGESETLSTSKTYEERFMENVKNLGPVRQRM--------IPSKFRDNACPVVESLTSEVDDPESVQRALNGKYAKEWKDAMISEYSSLLENDTWELVPPC---DDQNVVGSRWVLKVKRKEDGSIDRFKARVVAQGYSQTKGADYDEVFSPVARHTSLRTLLALANEYDLEVHQMDVRTAFLNGDIDCDIYMQQPEGFVNPDKP-DYLCKLQKSIYGLKQSARCWNDTLDGYLKSRGYRKSGADGCIYVKSVKKDGGRISFVILGVYVDDI 613
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: A0A1W7R6H7_AEDAL (Putative pol polyprotein (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6H7_AEDAL) HSP 1 Score: 244 bits (622), Expect = 4.690e-64 Identity = 182/547 (33.27%), Postives = 274/547 (50.09%), Query Frame = 1 Query: 7 GRHFAIIFVDDYSRMRKAYALRHKSEALWILKQFERDIAKANGQQIKHLRSDQRKEFTGESFGRVWA*NGIKQAFSAVYTPQQNGVAERSWRQVFEMI*GKMITADMCRRYWVEAARAAVYCLNRPPTRPHNRGTPYEKGHGTTPKLDHLRVFGWTAYGMLQ*PQRRKLDDKAWVRVFLGY----DRHMYIPKKSIQL--SRNVKFDEEDFVIGHRGQQEHDGTRDMEGLLSAPSVTPAVSRSRARGVRGDVTNTEKPTSTSSAARANPYNDDSEGETRTESGTKEQRPRGRSPILTRARVRESCEEDPGATARVAKVEDTGNPTEVVSEEKPKSVAEALNGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL*AIFSLAAEHDFKLEGMDVDTAYLNAPVKEELFVQRPHEFSPFSRHIPFVHRLYKTLYDLKLSGRNWNNTLDDIRAGTGLDRSITDPCLYFSHDKGGETDILVTVYVDDLDIVGRREK 1629 G + + +DD++R K Y L+ K E +++F + G+ +RSD E+ + GR + GI ++A Y+PQQNG+AER R + EM +I A+M R+W EA A Y N PTR + TPYE G P L H+++FG A+ + + KLD KA F+GY + ++ + + +L SR+ +F E G+ + G + TP + S N PT + + D SEGET + + +++ ++ +R S G KV N +P+S EA+ GPE + W++A +EE + EN TW LP GRK + KWIFKRKL+E G++ARYKARLVAQGF+Q G D+ E APV +M T + S+A + + ++ DV TAYLN ++E +++++P +++ V +L K LY LK S R WN TLD + A S+ DPCLY ++KG + VYVDD +V + EK Sbjct: 489 GIRYFMTMIDDFTRFTKVYFLKRKDEVPEKIQEFVQMAETRFGKTPAIIRSDSGGEYKSKHLGRFYRNKGITPQYTAAYSPQQNGIAERKNRTLVEMARCMLIEANMDVRFWAEAINTAAYIQNLLPTR-SIKSTPYEAWFGRKPDLKHVQMFGSQAFVHVPDQKWAKLDSKAVKLTFVGYADSQKAYRFVDQSTNKLTCSRDARFINE-------GKDLQIQAVERPGNIEIDLSTPKENGS----------NNPVPTFDDDE---DSFVDASEGETSSSAESEDD-------VVEINTLRRSNRSTKGVAPSRFKVGMAKNQLP-----EPRSFKEAVEGPECELWKSAIKEELMSHQENKTWDLVP---LPPGRKTVGCKWIFKRKLDEHGNVARYKARLVAQGFTQKFGTDYDEVYAPVVKMVTFRTLLSVATKRNMLIKHADVKTAYLNGELEELVYMRQPAGCEIGDKNL--VCKLRKGLYGLKQSARIWNKTLDKVLASLKFKPSVNDPCLYVRNEKGRTA--YLAVYVDDFVVVCKTEK 995
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: A0A0N1ICY1_PAPMA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Papilio machaon TaxID=76193 RepID=A0A0N1ICY1_PAPMA) HSP 1 Score: 244 bits (622), Expect = 4.910e-64 Identity = 174/585 (29.74%), Postives = 296/585 (50.60%), Query Frame = 1 Query: 1 FEGRHFAIIFVDDYSRMRKAYALRHKSEALWILKQFERDIAKANGQQIKHLRSDQRKEFTGESFGRVWA*NGIKQAFSAVYTPQQNGVAERSWRQVFEMI*GKMITADMCRRYWVEAARAAVYCLNRPPTRPHNRGTPYEKGHGTTPKLDHLRVFGWTAYGMLQ*PQRRKLDDKAWVRVFLGY----DRHMYI----PKKSIQLSRNVKFDEEDF---VIGHRGQQEHDGTRDM---EGLLSAPSVTPAVSRSRARGVRGDVTNTEKPTSTSSAARANPYNDDSEGETRTESGTKEQRPRGRSPILTRARVRESCEEDPGATARVAKVEDTGNPTEVVSEEKPKSVAEALNGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL*AIFSLAAEHDFKLEGMDVDTAYLNAPVKEELFVQRPHEFSPFSRHIPFVHRLYKTLYDLKLSGRNWNNTLDDIRAGTGLDRSITDPCLYFSHDKGGETDILVTVYVDDLDIVGRREKVD-EFKHDLSLAFQDERAGLPLARVGNR 1710 F G + + F+DDY+RM Y +R+KSE L + K F++ + +IK LR+D +E+ + F +GIK + Y+PQQNGVAER+ R + E + A + RR+W EA A+Y N+ P++ TP EK G L +LR FG AY M+ +R+KLD K +F+GY + I P K I+ SR+V+F E ++ ++G + D ++ E L++ + V+ + V + S ++A + DD + T +P +T +++S + D + VA +P+++ +AL+GP+A+ WR A +E+++ +N W LP G+KA++ KW+FK+KL +G + YKARLVA+GF+Q G D+ ET +PV R ST+ + +LA D ++ MDV TA+LN ++E +++ +P + + +V +L K +Y LK + + W + +D +++++PC+Y D I++ +YVDD+ I + + K +L F+ + G +G R Sbjct: 503 FSGAKYLLTFIDDYTRMTFGYFIRNKSEVLPVFKIFKKFVENQTNLKIKMLRTDNGREYVNKDFQLFLQEHGIKHQTTVPYSPQQNGVAERANRTIIEAGRCMLQEAGLDRRFWAEALNTAIYIKNKSPSKAVRGTTPEEKWSGNKVNLSNLRTFGCVAYAMIPNEKRKKLDAKCKQYIFVGYCSESKGYRLIDPENPSKCIK-SRDVQFLEGKMYKNLVLNKGNKTSDCELNISSNEDDLNSNDINDQVNPT-------SVIESSDSNSADTSASGCSFIDDPDDVTW-------------NPDMT---LQQSSDSDDTVSIAVAMT--------ACHNGEPQTIQDALSGPDAEHWRKAIADEYKSFEKNKAWNLT---LLPAGKKAVKCKWVFKKKLGSEGELLHYKARLVAKGFTQEYGIDYKETYSPVVRYSTIRTLIALAVNLDLYIDHMDVKTAFLNGDLRETVYMVQPDGYKVKGKE-NYVFKLNKAIYGLKQASKAWYDKIDSALTDLQFRKTLSEPCVYIRSDAPDNL-IILALYVDDILIFSKDSLAKTKLKEELMKKFEMKDLGRATHVLGMR 1050
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: UPI0016589FE9 (uncharacterized protein LOC118514016 isoform X1 n=1 Tax=Anopheles stephensi TaxID=30069 RepID=UPI0016589FE9) HSP 1 Score: 244 bits (622), Expect = 5.160e-64 Identity = 195/589 (33.11%), Postives = 297/589 (50.42%), Query Frame = 1 Query: 7 GRHFAIIFVDDYSRMRKAYALRHKSEALWILKQFERDIAKANGQQIKHLRSDQRKEFTGESFGRVWA*NGIKQAFSAVYTPQQNGVAERSWRQVFEMI*GKMITADMCRRYWVEAARAAVYCLNRPPTRPHNRGTPYEKGHGTTPKLDHLRVFGWTAYGMLQ*PQRRKLDDKAWVRVFLGYD------RHMYIPKKSIQLSRNVKFDEEDFVIGHRGQQEHDGTRDMEGLLSAPSVTPAVSRSRARGVRGDVTNTEKPTSTSSAARANPYNDDS-----------------EGETRTESGTKE---------QRPRGRSPILTRARVRESCEEDPGATARVAKV---EDTGNPTEVVSEEKPKSVAEALNGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL*AIFSLAAEHDFKLEGMDVDTAYLNAPVKEELFVQRPHEFSPFSRHIPFVHRLYKTLYDLKLSGRNWNNTLDDIRAGTGLDRSITDPCLYFSHDKGGETDILVTVYVDDLDIV-GRREKVDEFKHDLSLAF 1665 G + + +DD+SR Y L+ KSE ++++ + + G++ + +RSDQ E+ ++ + A GIK F+A Y+PQQNGVAER R + EM + A M +R+W EA A Y NR P+ +R TP+E G P L +LR+FG Y ++ +R+KLD KA F+GY R + IQ+SR+V+F E I +++ G +E P+ + + S + TN T++ S +DD TE+G E + P+++ VR S ATA V E+ E ++E PK+ EA++GP++ +W++A EE ++ ENGTW+ LP RKAI KWIFK K +EDG RYKARLVAQGF Q G D+ APV + T + LA++ + +D+ TAYL+ +KEE+F+++P F S + V RL++++Y LK + R WN +DD+ G +S DPCLY +K G++ I V +YVDD+ ++ E+ E H L+L F Sbjct: 487 GCRYYMTLIDDHSRYTFVYFLKKKSEVENKIREYVKLVQNQFGRKPRIIRSDQGGEYFSKALRKFCADEGIKMEFTAAYSPQQNGVAERKNRSLTEMGRCMLRDAGMHKRFWAEAVNTACYLQNRLPSAAVDR-TPFEIWFGKKPDLTNLRLFGCVGYVLIPSVKRKKLDVKAERMTFVGYSGEHKAYRMLNTKTGEIQISRDVRFLE----IDDGSKEQTYGDPKIE---DNPTESVEIEWSLDETKQEAKTNVANETTSESEFYGWDCSDDGWPRGFXXXXXXXXXXXXXXXXXTEAGAAEPEAVLDVIPEAMPAAVPVVSSTPVRRSQR----ATAGVPPARYDEEVYLAKECITE--PKTYKEAVSGPQSAEWKSAMAEEMQSHHENGTWEL---AELPPHRKAIGSKWIFKCKADEDGHFVRYKARLVAQGFCQKFGTDYDLVFAPVVKQITFRTMLVLASKRKMLTKHVDIKTAYLHGLLKEEIFMRQPQGFE--SGNPNEVCRLHRSIYGLKQAARVWNTKIDDVLKTMGFIQSTADPCLYI-REKAGKS-IFVLIYVDDVIVICNTEEEFSEVVHVLTLNF 1054
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Match: A0A4Y2R9J3_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=4 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2R9J3_ARAVE) HSP 1 Score: 243 bits (619), Expect = 5.300e-64 Identity = 181/564 (32.09%), Postives = 269/564 (47.70%), Query Frame = 1 Query: 7 GRHFAIIFVDDYSRMRKAYALRHKSEALWILKQFERDIAKANGQQIKHLRSDQRKEFTGESFGRVWA*NGIKQAFSAVYTPQQNGVAERSWRQVFEMI*GKMITADMCRRYWVEAARAAVYCLNRPPTRPHNRGTPYEKGHGTTPKLDHLRVFGWTAYGMLQ*PQRRKLDDKAWVRVFLGYDRH-----MYIPKKSIQLSRNVKFDEEDFVIGHRGQQEHDGTRDMEGLLSAPSVTPAVSRSRARGVRGDVTNTEKPTSTSSAARANPYNDDSEGETRTESGTKEQRPRGRSPILTRARVRESCEEDPGATARVAKVEDTGNPTEVVSEEKPKSVAEALNGPEADKWRAAEEEEWRALVENGTWKSEGPGRLPVGRKAIRRKWIFKRKLEEDGSIARYKARLVAQGFSQVEGEDFFETSAPVTRMSTL*AIFSLAAEHDFKLEGMDVDTAYLNAPVKEELFVQRPHEFSPFSRHIPFVHRLYKTLYDLKLSGRNWNNTLDDIRAGTGLDRSITDPCLYFSHDKGGETDILVTVYVDDLDIVGRREKVDEFKHDLSLAFQDERAG 1683 G+++ + FVDDYSR Y L K E L LK++ G+ +K LRSD E+ G+ GI + Y+PQQNGV+ER R + EM + A++ +R+W EAA A Y NR PT+P R TPYE P L H+RVFG AY +Q +R KLD KA +FLGYD +Y+ I +SR VKF E +E + L + + S G + T NP DD + + ++ T + R RS T+ P A A NP + + V + N E KW + +EE ++L +N TWK P P G+K I +W FK K + G+I RYKARLVAQGFSQ G D+ ET APV +T+ + AA + + +D+ TA+L+ +++E+++ +P + + V +L K +Y LK + R W+ + + G ++S DPCL+ + G + + VYVDDL I G+ E + + +L ++ + G Sbjct: 451 GKYYILTFVDDYSRYSMIYLLSKKDEVLSKLKEYIAMTRNKFGRTLKVLRSDNGGEYIGKEIEDFLKEQGIVHQLTVPYSPQQNGVSERKNRTLIEMTRCLLSEANLPQRFWAEAAMTATYLQNRLPTKP-KRKTPYELWTNRKPNLSHIRVFGCKAYAYIQKQKRGKLDSKAIEGIFLGYDYRSKGYRIYLGDNKIMISRTVKFIENPPPYDKNEAKELQNQDETTQQLVELELEHEENHSMEEGEINERTE------------VNPCEDDGDELSNSQIQTSQHR---RSERKTKGIP-------PERFAFFA------NPERIKEPKSWNDVLKMENAYEKQKWIESTKEEMKSLQKNETWKLVTP---PSGKKVIGCRWTFKAKYDSKGNIERYKARLVAQGFSQKFGTDYDETFAPVVTYTTIRTFLAAAAYKNLNVTHVDIKTAFLHGNLEDEVYMSQPEGYIEAGQEQK-VCKLNKAIYGLKQAARAWHLKIGESLIKYGFEQSKADPCLFKFANNGNP--MYIIVYVDDLLIAGKEEDIRKIIKELEEEYELKNLG 979 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14260.2584.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14260.2584.1 >prot_H-paniculata_contig14260.2584.1 ID=prot_H-paniculata_contig14260.2584.1|Name=mRNA_H-paniculata_contig14260.2584.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=240bp MYIPKKSIQLSRNVKFDEEDFVIGHRGQQEHDGTRDMEGLLSAPSVTPAVback to top mRNA from alignment at H-paniculata_contig14260:3812..6483+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14260.2584.1 ID=mRNA_H-paniculata_contig14260.2584.1|Name=mRNA_H-paniculata_contig14260.2584.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2672bp|location=Sequence derived from alignment at H-paniculata_contig14260:3812..6483+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14260:3812..6483+ >mRNA_H-paniculata_contig14260.2584.1 ID=mRNA_H-paniculata_contig14260.2584.1|Name=mRNA_H-paniculata_contig14260.2584.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1440bp|location=Sequence derived from alignment at H-paniculata_contig14260:3812..6483+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |