prot_H-paniculata_contig14253.2580.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14253.2580.1
Unique Nameprot_H-paniculata_contig14253.2580.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length361
Homology
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BLAST of mRNA_H-paniculata_contig14253.2580.1 vs. uniprot
Match: D7FIE1_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE1_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 3.080e-5
Identity = 26/44 (59.09%), Postives = 31/44 (70.45%), Query Frame = 0 
Query:    3 QRKRKLCSHEGCPKRPSYGLGGTGKAEICAQHAEKGMVNVRSQR 46
            Q+ R  C   GC K PSYG  G+ K E CAQHA+KGMVN+RS+R
Sbjct:  103 QQWRPCCKEHGCTKWPSYGGAGSKKVEFCAQHAKKGMVNLRSRR 146
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14253.2580.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIE1_ECTSI3.080e-559.09EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14253contigH-paniculata_contig14253:4685..5767 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14253.2580.1mRNA_H-paniculata_contig14253.2580.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14253 4466..6551 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14253.2580.1 ID=prot_H-paniculata_contig14253.2580.1|Name=mRNA_H-paniculata_contig14253.2580.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=361bp
MAQRKRKLCSHEGCPKRPSYGLGGTGKAEICAQHAEKGMVNVRSQRCSHE
GCTKNPSYGSAITKRRQFCRQHAEEGMVDVVSKRCSHEGCTKNPSYGWAV
TRKREACREHAQDGMVDVLHRKRCSHNGCSKFPSFGLSGTKKSEFCAYHA
EEGMVHVAKKTCVQEGCAKQPSYGLSGTRKAELCRQHAQDGMVDVLSKRC
SHEGCSKQPSYGSPGTKIAECCSQHAEDGMVDVVSRRCSHGNCSTLPSYG
LAGSSKRKFCRRHAQDGMIYVNSRRTCSRAACTKAPSYGLPSTQKVAYCR
RHAEIGMVDLVSRRCEQEGCSKIPSFGFLTGTKKAKFCLEHAKKGMVNVR
RKTASPEAAV*
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