Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 2077 |
| Cds size | 1137 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14247.2576.1 >prot_H-paniculata_contig14247.2576.1 ID=prot_H-paniculata_contig14247.2576.1|Name=mRNA_H-paniculata_contig14247.2576.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=379bp
MAEQQQSSPLSRPMSDTTSIPNASPSRHPSAAPSQPQYVLNAQQREVLRS
QMATFSKLAQNMDQAKSELARLHAHKEMAAQQQQAAAAQKVAAAAAAVAA
RAPPPANPQTVSIQLPPLPRQLQQAQRQQQRGGGAILPSGSSSPSALLPE
SSPSGISQHGSRQQVHSSVLPPLINPSSAGLPLRAPSSPRDGNDSLRAVA
NGLSPRGSSVVGGDGGSNAGVGSAGGALGSAPAADGGSAVHLTSIKSTGS
IGSTDGDALQQPSIAAMAGRNESATGGADFPAGLASSAAESGGGGLGLDS
GRFQGIGNVDTSPLPPLSAITGGTDQPLRAPMSGADVVLGRGGVGTGSAP
ALAESSAGIVRRGSSPGGATSSSLAQEGG back to topmRNA from alignment at H-paniculata_contig14247:2909..5969+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig14247.2576.1 ID=mRNA_H-paniculata_contig14247.2576.1|Name=mRNA_H-paniculata_contig14247.2576.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3061bp|location=Sequence derived from alignment at H-paniculata_contig14247:2909..5969+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGCAGCGAGTGGGGACGGCGGGGACTGTGCAAAGCAGGAGGCTCTGGAGA
TATATTTATCTCACCAAGAATGCAGGCACATAGCAAGGTCTGGTTCTGCC
ATTGTCCCCCGTAAAAGAGATATCGGGCCTCCAAAAGTCGATAGTTGTGT
TCGCACAAAGTACTGAACCGTTGTACCGACTGTTTTGAGAGCACCAACAC
GTTTGAGTTGCAAGTGCAATGGAGGAACACGGCATGAGAGGCGGCGGCAG
TGTTGGCGGCGGTGCCGACCATGGTTTCCGAGACAACTTGGCACGGCAAT
CTCCTTCCATCGGCGATCTCCAGGACCCGCAGCACGAGGACCAACAGAAC
ACGGTGCGCCTAACTAGTTTGTGTTGTTACCAGGACTTTTAAAAATCAAA
ATGGCGCCCCAGCAACGCAAGTAAGTCTTGTGCCAAAAATAGTTACTCCA
TGCACACCTGATCCTGTCAGTAATGCGTGTAAAATAGATGTGCAGCCGTC
AAGACGGCGCTGCCGCAGAGTAATGTGATCATCCCGTGATGCCTGGGTGT
GCCATCGGGAGCATAAATTCTACTGTGGAGGCTAAATATGCGGAATGTAT
TCCCCCTCATGTTCTGTCTCAATGTATCTTGCTAAGGGGTATTCTATATT
CTAGCAAACCGATATTTGAAAATATAAAATAAACATTGAAACATACTCGA
CACTGTACCTCTTCAACAACAGGGAGAGCGATACGTTTTGAATATAGCAC
AATATAATATGGGTCCTACTCGCGGGGAGCGGGGGTGTGTCGTTCTACCT
CGCACGAGGAAGACTTAATCTATTTAGCTTCACGGAGCGTGGGACGCGTC
TCGTATCGACAGGGTTTTGTCTCGTCGGAAGCAAGCCAGACCGAAGCGTA
TGACAATAACCCAGATGCGTTGGAACTATCCCAAAAAGACGAGGCAGTTA
TCATACAGAATGAGGCGTGCTGGATATAGCGGGGGCTATCTATTCCAACA
ATTTGAATTCATTTCGTAGACTGGCAGCCTGTCGAGGATGTAAGCGAAAG
CGTAGACCTGATTTATAGCGTCGATCCCCTGACTACCGCAGTAGATGTTA
ATGCCTTTCACTCGTATATCCTGCCGAGTTTGAAGAATCCACGCCGCCGT
GCATGTTTAGGGCGTCCCGCGGTAGGAGGCTCCAACACATGTGGTATCTG
GCGTTGTTTCGACTTACCTGGCACCCTGGAACCCAGGAAAGCTTTCGTTT
GAATTCTCTCCGTTCTGCTCTCTGTTTGTGTTTGCCCTTCTCGCGCTTTC
CGAAAGCTCATCGAGCAGCAGCGATACCAGATGGCGTTCCAGATTCATCA
ACAGCAGCAGCATCAGAGGCAGCCACAGCAGCAGCAAGCGACTTCACCAC
ACCAACGGCATGGCGCATTCCCTCCTCCTCCGCCGCCCCCTCTTCAAGCG
GCGCAGCAGGAGGGTAACCAGCTTCCGAGCCTGCCACAGGGTAGCACCTT
GCAGCAGCTGTACATGCAACAGCAGGTGCAGCAAAGGGCACAGCAGAAGC
TGACGGAGTCGCACCTCCAGCAGGCGAAATTTGCGGCAGCCAAGCAGCAT
CAACAACAACAATCAAAGAAACCGTCCACGCCGGCCCAACAGCAGCAACA
GCGTATGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAATCACAGCAGC
CAATTGCGGGTCAGGGAATTGCGCAGCAAGTAAAGCAGCAGCAGCAACAA
CAGCCGCCGTTCTTGCAACAACAGCTGTTGCAGCAGCGGCAAGAGCAAGA
GCGTCGGCAGCAACAGCTGCTACTTATACAGAAGACACATCTCAGGCAAC
TAAAACATCGTGCCGACGAAGCCCGGCAGACTCAACCACGACACCACCAC
CGACAACAACAGCACAAACTCCCCATGGCCGAGCAGCAGCAATCCTCACC
ACTCTCACGCCCGATGTCGGATACCACAAGCATCCCAAACGCCAGCCCCA
GCCGTCACCCGAGTGCGGCACCGAGCCAACCTCAATATGTCCTCAACGCC
CAGCAGCGAGAAGTCCTGAGGTCACAGATGGCCACCTTCAGTAAGCTGGC
GCAAAACATGGACCAGGCGAAATCAGAACTCGCACGTTTGCATGCACATA
AGGAGATGGCCGCACAGCAACAACAAGCAGCCGCGGCGCAGAAAGTGGCG
GCAGCAGCCGCGGCGGTGGCGGCAAGAGCGCCTCCGCCGGCGAACCCACA
GACAGTATCGATACAATTGCCGCCCCTACCTCGACAGCTGCAACAAGCGC
AGCGACAGCAACAGCGAGGTGGTGGGGCGATCCTGCCATCTGGCTCGTCC
TCACCCTCTGCTCTTCTTCCGGAATCGTCGCCATCGGGAATTTCGCAGCA
CGGCAGCCGACAGCAGGTCCATAGTTCGGTTCTCCCTCCGCTCATCAATC
CCTCCAGCGCAGGATTGCCCCTTCGTGCGCCATCATCCCCGCGCGATGGC
AACGACAGCCTGCGTGCAGTCGCCAATGGACTGTCCCCTCGAGGCTCCTC
CGTAGTCGGTGGTGATGGTGGTAGTAATGCTGGTGTTGGAAGTGCTGGTG
GCGCTTTGGGAAGTGCGCCTGCGGCAGACGGAGGAAGTGCGGTACACCTG
ACCTCTATCAAGTCAACAGGCAGCATTGGTAGCACCGACGGTGATGCCCT
TCAGCAGCCTTCTATCGCGGCCATGGCCGGGAGGAACGAATCCGCGACAG
GAGGAGCAGATTTTCCTGCTGGCTTGGCTTCTTCGGCCGCCGAGAGCGGC
GGCGGCGGTCTTGGTCTTGACTCTGGTCGCTTCCAGGGCATCGGAAACGT
GGATACGTCGCCACTTCCGCCTCTGTCGGCGATTACAGGGGGAACAGATC
AACCGCTGAGAGCACCGATGTCGGGGGCGGATGTTGTCCTTGGCCGGGGC
GGCGTGGGCACTGGCAGTGCCCCCGCCCTGGCCGAAAGCTCGGCCGGTAT
TGTTAGACGTGGATCTTCGCCCGGAGGCGCAACTTCGTCATCGTTGGCGC
AAGAAGGGGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig14247:2909..5969+ >mRNA_H-paniculata_contig14247.2576.1 ID=mRNA_H-paniculata_contig14247.2576.1|Name=mRNA_H-paniculata_contig14247.2576.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2274bp|location=Sequence derived from alignment at H-paniculata_contig14247:2909..5969+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCCGAGCAGCAGCAATCCTCACCACTCTCACGCCCGATGTCGGATAC
CACAAGCATCCCAAACGCCAGCCCCAGCCGTCACCCGAGTGCGGCACCGA
GCCAACCTCAATATGTCCTCAACGCCCAGCAGCGAGAAGTCCTGAGGTCA
CAGATGGCCACCTTCAGTAAGCTGGCGCAAAACATGGACCAGGCGAAATC
AGAACTCGCACGTTTGCATGCACATAAGGAGATGGCCGCACAGCAACAAC
AAGCAGCCGCGGCGCAGAAAGTGGCGGCAGCAGCCGCGGCGGTGGCGGCA
AGAGCGCCTCCGCCGGCGAACCCACAGACAGTATCGATACAATTGCCGCC
CCTACCTCGACAGCTGCAACAAGCGCAGCGACAGCAACAGCGAGGTGGTG
GGGCGATCCTGCCATCTGGCTCGTCCTCACCCTCTGCTCTTCTTCCGGAA
TCGTCGCCATCGGGAATTTCGCAGCACGGCAGCCGACAGCAGGTCCATAG
TTCGGTTCTCCCTCCGCTCATCAATCCCTCCAGCGCAGGATTGCCCCTTC
GTGCGCCATCATCCCCGCGCGATGGCAACGACAGCCTGCGTGCAGTCGCC
AATGGACTGTCCCCTCGAGGCTCCTCCGTAGTCGGTGGTGATGGTGGTAG
TAATGCTGGTGTTGGAAGTGCTGGTGGCGCTTTGGGAAGTGCGCCTGCGG
CAGACGGAGGAAGTGCGGTACACCTGACCTCTATCAAGTCAACAGGCAGC
ATTGGTAGCACCGACGGTGATGCCCTTCAGCAGCCTTCTATCGCGGCCAT
GGCCGGGAGGAACGAATCCGCGACAGGAGGAGCAGATTTTCCTGCTGGCT
TGGCTTCTTCGGCCGCCGAGAGCGGCGGCGGCGGTCTTGGTCTTGACTCT
GGTCGCTTCCAGGGCATCGGAAACGTGGATACGTCGCCACTTCCGCCTCT
GTCGGCGATTACAGGGGGAACAGATCAACCGCTGAGAGCACCGATGTCGG
GGGCGGATGTTGTCCTTGGCCGGGGCGGCGTGGGCACTGGCAGTGCCCCC
GCCCTGGCCGAAAGCTCGGCCGGTATTGTTAGACGTGGATCTTCGCCCGG
AGGCGCAACTTCGTCATCGTTGGCGCAAGAAGGGGGGATGGCCGAGCAGC
AGCAATCCTCACCACTCTCACGCCCGATGTCGGATACCACAAGCATCCCA
AACGCCAGCCCCAGCCGTCACCCGAGTGCGGCACCGAGCCAACCTCAATA
TGTCCTCAACGCCCAGCAGCGAGAAGTCCTGAGGTCACAGATGGCCACCT
TCAGTAAGCTGGCGCAAAACATGGACCAGGCGAAATCAGAACTCGCACGT
TTGCATGCACATAAGGAGATGGCCGCACAGCAACAACAAGCAGCCGCGGC
GCAGAAAGTGGCGGCAGCAGCCGCGGCGGTGGCGGCAAGAGCGCCTCCGC
CGGCGAACCCACAGACAGTATCGATACAATTGCCGCCCCTACCTCGACAG
CTGCAACAAGCGCAGCGACAGCAACAGCGAGGTGGTGGGGCGATCCTGCC
ATCTGGCTCGTCCTCACCCTCTGCTCTTCTTCCGGAATCGTCGCCATCGG
GAATTTCGCAGCACGGCAGCCGACAGCAGGTCCATAGTTCGGTTCTCCCT
CCGCTCATCAATCCCTCCAGCGCAGGATTGCCCCTTCGTGCGCCATCATC
CCCGCGCGATGGCAACGACAGCCTGCGTGCAGTCGCCAATGGACTGTCCC
CTCGAGGCTCCTCCGTAGTCGGTGGTGATGGTGGTAGTAATGCTGGTGTT
GGAAGTGCTGGTGGCGCTTTGGGAAGTGCGCCTGCGGCAGACGGAGGAAG
TGCGGTACACCTGACCTCTATCAAGTCAACAGGCAGCATTGGTAGCACCG
ACGGTGATGCCCTTCAGCAGCCTTCTATCGCGGCCATGGCCGGGAGGAAC
GAATCCGCGACAGGAGGAGCAGATTTTCCTGCTGGCTTGGCTTCTTCGGC
CGCCGAGAGCGGCGGCGGCGGTCTTGGTCTTGACTCTGGTCGCTTCCAGG
GCATCGGAAACGTGGATACGTCGCCACTTCCGCCTCTGTCGGCGATTACA
GGGGGAACAGATCAACCGCTGAGAGCACCGATGTCGGGGGCGGATGTTGT
CCTTGGCCGGGGCGGCGTGGGCACTGGCAGTGCCCCCGCCCTGGCCGAAA
GCTCGGCCGGTATTGTTAGACGTGGATCTTCGCCCGGAGGCGCAACTTCG
TCATCGTTGGCGCAAGAAGGGGGG back to top
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