mRNA_H-paniculata_contig1404.2470.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1404.2470.1 vs. uniprot
Match: D8LQ52_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ52_ECTSI) HSP 1 Score: 460 bits (1183), Expect = 2.910e-154 Identity = 249/429 (58.04%), Postives = 289/429 (67.37%), Query Frame = 2 Query: 488 TLFFRVTGAAAVARLEPLLLNRPWQGGGVRWSPARTEAETVGVGPHGNRNGRAGVLDFVWETTVTKDRRRQHRSARVLNRLSGAQVLEDKANLAHLQRLMTIPTLESYVVTGRVEVERWADLRFRPATI---RPPRLPEIQE------------------------NTKWQSL---DGHEARGGWWCVKASGGNGGMDVWVVHEGNWRGVVERLHEAEEYVIQRYVERPLLWRGRKFHFRCYATISADMSAWLYRSAYILCASRPYTLG--DGR------------MEEMGLADELVHISNLAVNKRTKGHPGQIPCDIPSEYPLLWPGMLELLRSLVEAAAPFMEHQASVEHFEFLGLDIIADVTGGVWLIEVNRLPGLESSVQNLAQENSMYNSMMMDLVHLVVLPPLIGCPREPGLFEVGFLPSSG 1642 TL FRVTGA++VARLEPLLL G G R + ++ G G R +DFVWETTVTK ++R+HR ARVLNRLSGAQVLEDKANL LQRLMT PTLESY V GR V RWA RF+ + RPP P +E T +S +GH WWCVKA+GGNGG+D+WV+H+GNW+ V E L E E YVIQRYV RP+LW+GRKFHFR YA + ADMSAWLYR+AYIL ASRPY+LG D R M ADE VHISNLAVNK T+GHPGQ+PCD+PSEY LWP MLELL SLV+AA PFM+HQA+ HFEFLGLDIIAD GGVWL+E NRLPGL+SS QNL +EN +Y+ MM+DL+ L+VLPPL GC E GLFEV P+SG Sbjct: 66 TLTFRVTGASSVARLEPLLL-----GPGGRNQRPTIWSRSLDSGDDGVR------VDFVWETTVTKQQQRRHRDARVLNRLSGAQVLEDKANLVLLQRLMTAPTLESYAVNGRNAVARWAQQRFKEQNLPRDRPPPPPSTREAGYPHDDQFLARKRALVQGTSAATETTQESEAVGNGHAGEEDWWCVKAAGGNGGLDIWVLHKGNWKMVTEALSEHESYVIQRYVARPMLWQGRKFHFRAYALLRADMSAWLYRTAYILSASRPYSLGGNDSRDDGVRVGAGVADMHRAAFADEFVHISNLAVNKHTEGHPGQVPCDLPSEYGALWPKMLELLGSLVDAATPFMQHQANPNHFEFLGLDIIADSAGGVWLMEANRLPGLQSSKQNLEKENEVYDGMMLDLIRLLVLPPLTGCSPEQGLFEVAATPASG 483
BLAST of mRNA_H-paniculata_contig1404.2470.1 vs. uniprot
Match: A0A7S2XVN0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVN0_9STRA) HSP 1 Score: 223 bits (568), Expect = 9.870e-65 Identity = 123/283 (43.46%), Postives = 170/283 (60.07%), Query Frame = 2 Query: 794 PTLESYVVTGRVEVERWADLRFRPATIRPPRLPEIQENTKWQSLDGHEARGG---------WWCVKASGGNGGMDVWVVHEGNWRGVVERLH--EAEEYVIQRYVERPLLWRGRKFHFRCYATISADMSAWLYRSAYILCASRPYTLGDGRMEEMGLADELVHISNLAVNKRTKGHPGQIPCDIPSEYPLLWPGMLELLRSLVEAAAPFMEHQASVEHFEFLGLDIIADVTGG-VWLIEVNRLPGLESSVQNLAQENSMYNSMMMDLVHLVVLPPLIGCPREP 1606 PTL++++V + + RWA R+ P +T + G + G WW VK S GNGG D+WV+++ N+R V+E + + EE V Q YV RPLL+ GRKFHFRCYA ++A M + Y AYIL A+ Y R+E+ G D + HISN+AVNK G+PGQ+P +P++YP L+ M EL ++ A+PF+ Q S+ HFEFLGLDI+AD VWL+EVNRLPGL+SS N A+E+ YN+MM + ++V P L P EP Sbjct: 1 PTLKTFIVRDKDGLRRWARERWGDPESSEV-APADNASTTTNQVSGAQPVGDGGGAGEGSDWWMVKVSKGNGGSDIWVINQQNFRAVLEDISAVKEEELVCQEYVARPLLFHGRKFHFRCYALLAASMQGFFYDRAYILAATNQY-----RLEQPG--DAMTHISNMAVNKHMAGYPGQVPTHLPTDYPQLFERMKELYSEVIRVASPFLAVQRSLSHFEFLGLDIMADADASRVWLLEVNRLPGLQSSKSNQAEEDVTYNTMMSAAMEMLVYPVLKLQPGEP 275
BLAST of mRNA_H-paniculata_contig1404.2470.1 vs. uniprot
Match: A0A482RWA3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RWA3_9ARCH) HSP 1 Score: 224 bits (572), Expect = 5.230e-64 Identity = 145/392 (36.99%), Postives = 211/392 (53.83%), Query Frame = 2 Query: 497 FRVTGAAAVARLEPLLLN-------RPWQGGGVRWSPARTEAETVGVGPHGNRNGRAGVLDFVWETTVTKDRRRQHRSARVLNRLSGAQVLEDKANLAHLQRLMTIPT-LESYVVTGRVEVERWADLRFRPATIRPPRLPEIQENTKWQSLDGHEARGGWWCVKASGGNGGMDVWVVHEGNWRGVVERLHEAEEYVIQRYVERPLLWRGRKFHFRCYATISADMSAWLYRSAYILCASRPYTLGDGRMEEMGLADEL-VHISNLAVNKRTKGHPGQIPCDIPSEYPLLWPGMLELLRSLVEAAAPFMEHQASVEHFEFLGLDIIA---------DVTGGV---WLIEVNRLPGLESSVQNLAQENSMYNSMMMDLVHLVVLPPLIGCPREPG 1609 +R+TG +V RLEPLL P+Q + T A+ +G FVWET K H A VLNRL +LE K+N A+L L+ LE++V E+ W + R+ A + P ++ DG + R WW VK S GNGG DV +++ NWR V++ L EE V+Q V RPLL++GRKFHFRCYA + DM+A+L+R +IL +S PY + A L +H++NL++NK+ GHPGQIPC++P++YP ++ + L +V+AA P++ Q S HF+F GLD++ D +G V +IE+NRLPGLESS N E+++Y+ MM + +V+ P + R G Sbjct: 7 YRITGKRSVERLEPLLHQIHPALKFLPYQNCDSLANEGSTCAQRMG---------------FVWETYCEKTYWELHNRAVVLNRLHNNAILESKSNFAYLGHLVQEHRMLETFVARNSEELLNWIERRWGSAAV-----PRDGDD------DGDDERD-WWAVKVSAGNGGRDVHIMNRQNWRYVLQGLPN-EEAVLQECVPRPLLYQGRKFHFRCYALLMGDMAAYLHRHCFILTSSLPYNPLEPCTSSEQYASRLRMHVTNLSINKKFTGHPGQIPCNLPADYPDVFLRLSSLWAEIVQAARPYLRCQRSRRHFDFYGLDVVCSRPSSAHHNDDSGAVSEVHVIELNRLPGLESSALNTQAEDALYDEMMRQALRIVLAPEISMSRRTTG 370
BLAST of mRNA_H-paniculata_contig1404.2470.1 vs. uniprot
Match: W7TQE7_9STRA (Tubulin-tyrsoine ligase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQE7_9STRA) HSP 1 Score: 192 bits (489), Expect = 1.220e-51 Identity = 146/410 (35.61%), Postives = 204/410 (49.76%), Query Frame = 2 Query: 485 TTLFFRVTGAAAVARLEPLLLNRPWQGGGVRWSPARTEAETVGVGPHGNRNGRAGVLDFVWETTVTKDRRRQHRSARVLNRLSGAQVLEDKANLAHLQRLMT-----IPTLESYVVTGRVEVERWADLRFRPATIRPPRLPEIQENTKWQSLDGHEARGGWWCVKASGGNGGMDVWVVHEGNWR-GVVERLHEAEEYVIQRYVERPLLWRGR-KFHFRCYATI-----------SADMSA-------WLYRSAYILCASRPYTLGDGRMEEMGLADEL---VHISNLAVNKRTKGHPGQIPCDIPSEYPLLWPGMLELLRSLVEAAAPFMEHQASVEHFEFLGLDIIA-------------DVTGGVWLIEVNRLPGLESSVQNLAQENSMYNSMMMDLVHLVVLPPLIG 1591 T L +R+TGAAA AR+ PLL R V W R + P LDFVWET V + + H ARVLNRLS +LE+KA +H+ L++ IP LE+ VV ++ + W D R R +L +Q D E WW +KA+G NGG DV V+ L + YV+QRY+ RPLL + KFH+R YA + S D A W+Y+ +IL AS Y + G A+E+ H++NL++NK G+PGQ+P D+ + P + M ++V AAAPF+ QAS HFE GLD + D ++L+E+NRLPGL+SS QN A E+ +Y+ M+ +L+ L V+P L G Sbjct: 20 THLIYRITGAAAQARIVPLLQERAE----VHWIAGRCQNACNQADP-------PVPLDFVWETHVARRDKPLHDCARVLNRLSNTVILENKAYFSHILALVSSQNQDIPVLETAVVRA-MDAQAWLDARRR-------QLRTVQNANYTVFTDCTEDAEEWWILKAAGANGGGDVHVLPPACTHVPACIALRPLDSYVVQRYITRPLLLEKKYKFHYRVYALLRMTGVEETGRTSVDREARRARFQPWIYQHGFILRASERYH----HATKCGSANEIDAAAHLTNLSLNKHCPGYPGQLPIDL-ARAPRTFGCMKAHWAAVVRAAAPFLRAQASSGHFELFGLDYLPVEAACAPEDMMHLDKFDSMYLMEINRLPGLQSSRQNSADEDELYDCMIRELLDLCVMPFLSG 405
BLAST of mRNA_H-paniculata_contig1404.2470.1 vs. uniprot
Match: A0A7S3Y052_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y052_HETAK) HSP 1 Score: 149 bits (377), Expect = 1.220e-38 Identity = 79/152 (51.97%), Postives = 99/152 (65.13%), Query Frame = 2 Query: 1142 MSAWLYRSAYILCASRPYTLGDGRMEEMGLADELVHISNLAVNKRTKGHPGQIPCDIPSEYPLLWPGMLELLRSLVEAAAPFMEHQASVEHFEFLGLDIIADVTGGV-WLIEVNRLPGLESSVQNLAQENSMYNSMMMDLVHLV-VLPPLIG 1591 + + Y AYIL A RPY LG +D+L HISN+AVNK G+PGQIPC +P E+P LW M E+ LV AAAPF++ QA+ HFEF GLD +AD G WL+EVNRLPGL++S N A E+ MYN M+ DL+ L+ V PL G Sbjct: 7 LQPYFYEMAYILTAMRPYRLG-------APSDDLRHISNMAVNKHEAGYPGQIPCRVPVEFPALWASMTEVWAELVRAAAPFLQVQANARHFEFYGLDFLADADGETAWLLEVNRLPGLQASAANKAAEDQMYNKMIADLLELIGVSLPLEG 151
BLAST of mRNA_H-paniculata_contig1404.2470.1 vs. uniprot
Match: A0A835Z2B8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2B8_9STRA) HSP 1 Score: 158 bits (400), Expect = 2.310e-38 Identity = 116/320 (36.25%), Postives = 146/320 (45.62%), Query Frame = 2 Query: 491 LFFRVTGAAAVARLEPLLLNRPW--QGGGVRWSPARTEAETVGVGPHGNRNGRAGVLDFVWETTVTKDRRRQHRSARVLNRLSGAQVLEDKANLAHLQRLMTIPTLESYVVTGRVEVERWADLRFRPATIRPPRLPEIQENTKWQSLDGHEA---------------------------------------RGG------WWCVKASGGNGGMDVWVVHEGNWRGVVERLHEAE-----EYVIQRYVERPLLWR---GRKFHFRCYATISADMSAWLYRSAYILCASRPYTLGDGRMEEMGLADELVHISNLAVNKRTKG 1285 L +RVTGA AV+R+ P+L +G V W A + E LDFV+ETTVTKD + HR A VLNRL G+ VLEDKA+ A L R M P LES++V G VE WA R+ P E + A RG WWCVKA+ GNGG DVWV+H GN + +V +L YV+QRYV RPLL G K HFRC+ + D+SAWL+ A +L A PY L D + +H++NLA +KR G Sbjct: 11 LRYRVTGAGAVSRIRPVLDTDSVCREGCTVEWQEASSPDER---------------LDFVYETTVTKDWQAAHRGAVVLNRLCGSVVLEDKASFALLSRRMAAPALESHLVEGSSGVEAWAKARWGPLFNSSSSGDEGGSGAEGNDSSSSGAAACHRCGSREPVGDXXXXXXXXXAAGSLSSGAAAARARCRGAPPREPDWWCVKAARGNGGGDVWVLHAGNAQRLVAQLSRCGGGGGGAYVLQRYVARPLLLPRCGGAKSHFRCFGVLRGDLSAWLHAGACVLRARAPYALSDA-------GNPSIHLTNLAFSKRPGG 308
BLAST of mRNA_H-paniculata_contig1404.2470.1 vs. uniprot
Match: A0A4D9DE03_9STRA (ADP,ATP carrier protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DE03_9STRA) HSP 1 Score: 125 bits (314), Expect = 1.310e-26 Identity = 92/274 (33.58%), Postives = 134/274 (48.91%), Query Frame = 2 Query: 827 VEVERWADLRFRPATIRPPRLPEIQENTKWQSLDGHEARGGWWCVKASGGNGGMDVWVVHEGNWR-GVVERLHEAEEYVIQRYVERPLLWRGR-KFHFRCYATI-----------SADMSA-------WLYRSAYILCASRPYTLGDGRMEEMGLADEL---VHISNLAVNKRTKGHPGQIPCDIPSEYPLLWPGMLELLRSLVEAAAPFMEHQASVEHFEFLGLDIIA-------------DVTGGVWLIEVNRLPGLESSVQNLAQENSMYN 1540 ++ + W + R R +L +Q + D E WW +KA+G NGG DV V+ L + YV+QRY+ RPLL + KFH+R YA + S D A WLY+ +IL AS Y + G A+E+ H++NL++NK G+PGQ+P D+ + P + M ++V AAAPF+ QAS HFE GLD + D ++L+E+NRLPGL+SS QN A E+ +Y+ Sbjct: 1 MDAQAWLNARRR-------QLRTVQNSNHTAFTDYTEDAEEWWILKAAGANGGGDVHVLPPACTHVPACIALRPLDSYVVQRYITRPLLLEKKYKFHYRVYALLRMTGVEETGHTSVDGEARRARFQPWLYQHGFILRASERYH----HATKCGSANEIDAAAHLTNLSLNKHCPGYPGQLPIDL-ARAPRTFGCMKAHWAAVVRAAAPFLRAQASSGHFELFGLDFLPVEPARAPEDMMRLDEFDSMYLMEINRLPGLQSSPQNSADEDGLYD 262
BLAST of mRNA_H-paniculata_contig1404.2470.1 vs. uniprot
Match: F0XVE3_AURAN (Aminotran_5 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVE3_AURAN) HSP 1 Score: 99.8 bits (247), Expect = 2.940e-18 Identity = 92/324 (28.40%), Postives = 141/324 (43.52%), Query Frame = 2 Query: 647 GVLDFVWETTVTKDRRRQHRSARVLNRLSGAQV-LEDKANLAHLQRLMTIPTLESYVVTGRVEVERWADLRFRPATIRPPRLPEIQENTKWQSLDGHEARGGWWCVKASGGNGGMDVW-VVHEGNWRGVV--ERLHEAEEYVIQRYVERPLLWRGRKFHFRCYATISADMSAWLYRSAYILCASRPYTLGDGRMEEMGLADELVHISNLAVNKRTKGHPGQ--IP----CDIPSEYPLLWPGMLELLRSLVEAAAPFMEHQASVEH-FEFLGLDIIADVTGG---VWLIEVNRLPGLESSVQNLAQENSMYNSMMMDLVHLVVL 1576 G D +W T +K + R N ++GA+ LEDK + LQR M TL S R + W + PA LDG W VK + N G+ +W G+ + + + E V+Q+Y+ERP+LWRGRK FR YA + S +LY A + PY G A H++N++VNK G +P D+ + +P + M +LRSL A AP + A+ + FE +G+D + D WL+E N P S E + ++++M+D++ V+ Sbjct: 59 GDADLIWLNTPSKAAKAACRDCAHYNHVAGARAALEDKCRMGELQRRMGERTLRSETFADRGALRAWV-AKHGPA------------------LDGG------WVVKDATANSGVGLWFAASPGDLAALAASDAVDARGEVVLQQYLERPMLWRGRKLQFRVYA-VWQGRSCFLYAGAMAQVCAAPYAAPVAGEALAGTA----HVTNVSVNKDADEAAGGAFVPERPILDLAAAHPAQFAAMKRVLRSLSRACAPGLAPAAAGRNRFELVGVDFLCDDDAADPHAWLVECNCPPNSAGSAAEGPIE-AFHHALMVDVLDRFVV 351
BLAST of mRNA_H-paniculata_contig1404.2470.1 vs. uniprot
Match: A0A250XAH2_9CHLO (Histone acetyltransferase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XAH2_9CHLO) HSP 1 Score: 87.0 bits (214), Expect = 4.420e-14 Identity = 61/195 (31.28%), Postives = 93/195 (47.69%), Query Frame = 2 Query: 953 WCVKASGGNGGMDVWVVHE-GNWRGVVERLHEAEEYVIQRYVERPLLWRGRKFHFRCYATISADMSAWLYRSAYILCASRPYTLGDGRMEEMGLADELVHISNLAVNKRTKG-HPGQIPCDIPSEY------------PLLWPGMLELLRSLVEAAAPFMEHQASVEHFEFLGLDIIADVTGGVWLIEVNRLPGL 1495 W VK + N G + V + G+ ++R ++VIQ+Y+E PLL GRKF R Y + D S +LY AY+ +S PY+L D L++ H++N A+ K+ H + C + E +WP + E ++ L + + + FE LGLD + D G V+LIEVN P L Sbjct: 117 WIVKPTSLNRGNGIEVYNSLGDIMDHLKRKPAGSKWVIQKYIEDPLLVGGRKFDIRAYVLCAHDGSVYLYHKAYVRTSSTPYSLED-------LSNRASHLTNDAIQKKLDSYHQYEDHCKLSLEQLQASVGPSIDVQGSVWPQLRESVKQLFSHVSKKLNPRNLSHSFELLGLDFMIDNNGQVYLIEVNTSPAL 304
BLAST of mRNA_H-paniculata_contig1404.2470.1 vs. uniprot
Match: A0A835ZQ42_9STRA (Tubulin-tyrosine ligase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ42_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 7.540e-14 Identity = 69/206 (33.50%), Postives = 91/206 (44.17%), Query Frame = 2 Query: 935 EARGGWWCVKASGGNGGMDVWVVHEGN-WRGVVERLHEAEEYVIQRYVERPLLWRGRKFHFRCYATISADMSAWLYRSAYILCASRPYTLGD-----------GRMEEMGLADELVHI---SNLAVNKRTKGHPGQIPCDIPSEYPLLWPGMLELLRSLVEAAAPFMEHQASVEH-FEFLGLDIIADVTGGVWLIEVNRLPGLESS 1504 EARGGW +KAS N G V +V + N R VV H+ E+V+Q Y+ERPLL GRKFH R Y +S +L+ +L A PY GD R E DE + S+LA + G G D + + M + L A A + H FE GLD + D VWL+E N P + + Sbjct: 181 EARGGW-ILKASTLNKGAGVHLVTDFNDLRDVVHANHDIREWVLQEYIERPLLVHGRKFHLRAYVLAVGCLSVYLFDRVLLLSAHAPYAAGDFSDPLAHITNTARQCETAAFDEAASVGLLSDLATHLTRDG--GMADGDAEAAVTGIVTAMRAITAELFRAFKGEFAVFAPLPHCFEHFGLDFMVDEALNVWLLEANPGPDFKQT 383 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1404.2470.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1404.2470.1 >prot_H-paniculata_contig1404.2470.1 ID=prot_H-paniculata_contig1404.2470.1|Name=mRNA_H-paniculata_contig1404.2470.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=448bp MSLECRPGSRKLPTAPTPEEAESTGPSPLHASPKHVELEHDTTTAAATLAback to top mRNA from alignment at H-paniculata_contig1404:21355..25172+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1404.2470.1 ID=mRNA_H-paniculata_contig1404.2470.1|Name=mRNA_H-paniculata_contig1404.2470.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3818bp|location=Sequence derived from alignment at H-paniculata_contig1404:21355..25172+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1404:21355..25172+ >mRNA_H-paniculata_contig1404.2470.1 ID=mRNA_H-paniculata_contig1404.2470.1|Name=mRNA_H-paniculata_contig1404.2470.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2688bp|location=Sequence derived from alignment at H-paniculata_contig1404:21355..25172+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |