mRNA_H-paniculata_contig1402.2458.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1402.2458.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE) HSP 1 Score: 141 bits (355), Expect = 1.490e-35 Identity = 76/202 (37.62%), Postives = 108/202 (53.47%), Query Frame = 1 Query: 1 IWTPDAAREMRGRLLVCG---EGGPRVVEATLYGLHRYCVIY--------------------TGATVPRPLASTRRGMEAGEVMHFDFLHIEQSEIASV--VDRQDGYKYVLVMEDEVNGLVRLALAKQCTAKFTSEELLRWCATYGMARVWVSDNATHFKNCVLRSVANELGIHHRFTAAESAWINGTVDRVMRKAIKTTK 531 +W PD A ++ RL+VC E G R ATL L YC + G VPRPL T G GEV+HFD+L++ S +D ++G+KY+LVM D+++ V L CTA T++ LL WC G+ VWVSD A+HFKN ++ ++ LG+ F+ A S W NGT +R+MR+ ++T K Sbjct: 1283 LWIPDQASALQVRLMVCAHMKEAGHRGAVATLQRLSEYCCWFRMEEHVTDFVKQCLHCMDSKAGEKVPRPLGETVHGTRPGEVVHFDYLYVGASGPLGDDGLDEEEGFKYILVMMDDMSNWVWLEPTGACTACLTAQHLLTWCKILGVPEVWVSDTASHFKNHMMAALETALGVDRNFSVANSPWSNGTCERMMREVVRTLK 1484
BLAST of mRNA_H-paniculata_contig1402.2458.1 vs. uniprot
Match: A0A6G0X120_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X120_9STRA) HSP 1 Score: 118 bits (295), Expect = 9.820e-28 Identity = 66/199 (33.17%), Postives = 100/199 (50.25%), Query Frame = 1 Query: 1 IWTPDAAREMRGRLLVC---GEGGPRVVEATLYGLHR-------------------YCVIYTGATVPRPLASTRRGMEAGEVMHFDFLHIEQSEIASVVDRQDGYKYVLVMEDEVNGLVRLALAKQCTAKFTSEELLRWCATYGMARVWVSDNATHFKNCVLRSVANELGIHHRFTAAESAWINGTVDRVMRKAIKTTK 531 IW PDAA +++ RL V G G R ++ T G+ +C+ G VPRP S + E++HFD+L + ++ ++G+KYVLV++D+++G RL + A+ T+E L+ W TYG WVSD +HFKN V+ + +G HH T S W NGTV+ V R ++ K Sbjct: 96 IWVPDAAVDLQQRLCVVAHQGAAGHRGIDVTTKGVMDLFTWKSAKEDIEAFVKGCIHCLCVDGVVVPRPWGSALHAEKPNELIHFDWLQLPEA--------KNGWKYVLVVKDDMSGFCRLYPSSTADAEKTAEALMDWFTTYGNVTTWVSDGGSHFKNEVVAKIQKLIGAHHHITTPHSPWANGTVEVVNRLILRCMK 286
BLAST of mRNA_H-paniculata_contig1402.2458.1 vs. uniprot
Match: A0A6G0WYM7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYM7_9STRA) HSP 1 Score: 118 bits (295), Expect = 1.660e-27 Identity = 66/199 (33.17%), Postives = 100/199 (50.25%), Query Frame = 1 Query: 1 IWTPDAAREMRGRLLVC---GEGGPRVVEATLYGLHR-------------------YCVIYTGATVPRPLASTRRGMEAGEVMHFDFLHIEQSEIASVVDRQDGYKYVLVMEDEVNGLVRLALAKQCTAKFTSEELLRWCATYGMARVWVSDNATHFKNCVLRSVANELGIHHRFTAAESAWINGTVDRVMRKAIKTTK 531 IW PDAA +++ RL V G G R ++ T G+ +C+ G VPRP S + E++HFD+L + ++ ++G+KYVLV++D+++G RL + A+ T+E L+ W TYG WVSD +HFKN V+ + +G HH T S W NGTV+ V R ++ K Sbjct: 621 IWVPDAAVDLQQRLCVVAHQGAAGHRGIDVTTKGVMDLFTWKSAKEDIEAFVKGCIHCLCVDGVVVPRPWGSALHAEKPNELIHFDWLQLPEA--------KNGWKYVLVVKDDMSGFCRLYPSSTADAEKTAEALMDWFTTYGNVTTWVSDGGSHFKNEVVAKIQKLIGAHHHITTPHSPWANGTVEVVNRLILRCMK 811
BLAST of mRNA_H-paniculata_contig1402.2458.1 vs. uniprot
Match: A0A8K1FDA4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FDA4_PYTOL) HSP 1 Score: 113 bits (282), Expect = 9.140e-26 Identity = 65/197 (32.99%), Postives = 98/197 (49.75%), Query Frame = 1 Query: 1 IWTPDAAREMRGRLLVCGEGGP-----------------------RVVEATLYGLHRYCVIYTGATVPRPLASTRRGMEAGEVMHFDFLHIEQSEIASVVDRQDGYKYVLVMEDEVNGLVRLALAKQCTAKFTSEELLRWCATYGMARVWVSDNATHFKNCVLRSVANELGIHHRFTAAESAWINGTVDRVMRKAIK 522 IW P A E+ RL+V GP RVV+ L G + G VPRP + R + E +H+D+L++ +S ++Y+LVM+D+ V L + T+ T+E +L W + +G+ R+W+SDN +HFKN V+R V+ L H FT A S WING+V+RV + I+ Sbjct: 692 IWIPTQANELLQRLMVIAHCGPQGHRGRDALIEILKRRFSVNNLRRVVDRFLSGCLMCKHVKGGRVVPRPWSQKFRSHKRNEALHWDYLYLGES--------FGDFEYLLVMKDDATHYVELVPCAKPTSTVTAEAILDWHSRFGVPRIWISDNGSHFKNDVMRQVSRRLNCHQEFTLAYSPWINGSVERVNKDVIQ 880
BLAST of mRNA_H-paniculata_contig1402.2458.1 vs. uniprot
Match: A0A6A4Z074_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z074_9STRA) HSP 1 Score: 108 bits (271), Expect = 2.430e-24 Identity = 64/199 (32.16%), Postives = 98/199 (49.25%), Query Frame = 1 Query: 1 IWTPDAAREMRGRLLVC---GEGGPRVVEATLYG-LHRY------------------CVIYTGATVPRPLASTRRGMEAGEVMHFDFLHIEQSEIASVVDRQDGYKYVLVMEDEVNGLVRLALAKQCTAKFTSEELLRWCATYGMARVWVSDNATHFKNCVLRSVANELGIHHRFTAAESAWINGTVDRVMRKAIKTTK 531 IW P+AA +++ R+ + G G R V T G L R+ C+ G VPRP + E++HFD+L + + +G+KYVLV++D+++G RL + A+ T+ L+ W AT+G+ WVSD THFKN V+ + +G HH T + W NGTV+ V R ++ K Sbjct: 198 IWIPEAAVDLQQRICIIAHQGAAGHRGVGVTTQGVLERFEWRTAKEDLNAFVGSCLHCLCVDGTMVPRPWGAALHAERPNELIHFDWLQLPPA--------GNGWKYVLVVKDDMSGFCRLFPSATADAESTANALMDWFATHGIVSTWVSDGGTHFKNEVVGKIKRMIGAHHHITTPYTPWANGTVEVVNRLILRGLK 388
BLAST of mRNA_H-paniculata_contig1402.2458.1 vs. uniprot
Match: A0A6A3J1E7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3J1E7_9STRA) HSP 1 Score: 107 bits (268), Expect = 6.560e-24 Identity = 53/143 (37.06%), Postives = 80/143 (55.94%), Query Frame = 1 Query: 103 YCVIYTGATVPRPLASTRRGMEAGEVMHFDFLHIEQSEIASVVDRQDGYKYVLVMEDEVNGLVRLALAKQCTAKFTSEELLRWCATYGMARVWVSDNATHFKNCVLRSVANELGIHHRFTAAESAWINGTVDRVMRKAIKTTK 531 +C++ G +PRP T + E++HFDFL S+++ +DG KYV V++D ++G V L + T LL W +G+ R+WVSD HFKN V+ + + LG HH FT + + W NGTV V R+ +K+ K Sbjct: 503 HCMVTAGGKIPRPHGETLVATKPNELLHFDFL--------SMLEGEDGSKYVFVLKDGMSGYVELVPCIDAASDQTYASLLDWFKRFGVVRLWVSDQGAHFKNQVIVRLQSALGAHHHFTLSYTPWTNGTVKVVNREVLKSVK 637
BLAST of mRNA_H-paniculata_contig1402.2458.1 vs. uniprot
Match: A0A6G0QQ04_9STRA (Integrase catalytic domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6G0QQ04_9STRA) HSP 1 Score: 105 bits (263), Expect = 3.200e-23 Identity = 57/156 (36.54%), Postives = 83/156 (53.21%), Query Frame = 1 Query: 64 PRVVEATLYGLHRYCVIYTGATVPRPLASTRRGMEAGEVMHFDFLHIEQSEIASVVDRQDGYKYVLVMEDEVNGLVRLALAKQCTAKFTSEELLRWCATYGMARVWVSDNATHFKNCVLRSVANELGIHHRFTAAESAWINGTVDRVMRKAIKTTK 531 P V + G Y V G +PRP T + +++HFDFL S+++ +DG KYV V++D ++G V L T+ T LL W +G+ R+WVSD HFKN V+ + + LG HH FT + + W NGTV V R+ +K+ K Sbjct: 749 PADVSTFVQGCLHYMVT-AGGKIPRPHGETLVATKPNDLLHFDFL--------SMLEGEDGSKYVFVLKDGMSGYVELVPCIDATSDQTYASLLDWFKRFGVVRLWVSDQGAHFKNQVIARLQSALGAHHHFTLSYTPWTNGTVKVVNREVLKSVK 895
BLAST of mRNA_H-paniculata_contig1402.2458.1 vs. uniprot
Match: UPI001E1DBC25 (uncharacterized protein LOC123544734 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DBC25) HSP 1 Score: 104 bits (260), Expect = 3.330e-23 Identity = 52/134 (38.81%), Postives = 77/134 (57.46%), Query Frame = 1 Query: 121 GATVPRPLASTRRGMEAGEVMHFDFLHIEQSEIASVVDRQDGYKYVLVMEDEVNGLVRLALAKQCTAKFTSEELLRWCATYGMARVWVSDNATHFKNCVLRSVANELGIHHRFTAAESAWINGTVDRVMRKAIK 522 G PRPL EV+HFD+L++ S + GYKY+L+++D+++G + L AK + T + L W AT+G+A +WVSD +HFKN V+ S+ L H FT A S W NGTV+R R+ ++ Sbjct: 36 GHRTPRPLGQALHASLPNEVIHFDYLYMGPSGV--------GYKYLLLIKDDLSGYLWLVPAKAADSASTVDALTLWFATFGVAHIWVSDQGSHFKNQVMGSLRKALRAQHHFTTAYSPWANGTVERACREVLR 161
BLAST of mRNA_H-paniculata_contig1402.2458.1 vs. uniprot
Match: A0A6A5B0X9_9STRA (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5B0X9_9STRA) HSP 1 Score: 101 bits (251), Expect = 8.510e-23 Identity = 62/201 (30.85%), Postives = 97/201 (48.26%), Query Frame = 1 Query: 1 IWTPDAAREMRGRLLV---CGEGGPR-------VVEATLYGLH---------RYCVIYT----GATVPRPLASTRRGMEAGEVMHFDFLHIEQSEIASVVDRQDGYKYVLVMEDEVNGLVRLALAKQCTAKFTSEELLRWCATYGMARVWVSDNATHFKNCVLRSVANELGIHHRFTAAESAWINGTVDRVMRKAIKTTKV 534 +W P AA ++ R+++ CG G R V Y H R C++ G V RP A E E +HFD+L++ ++ G KYVLV++D++ L T++ + L+ W +GM RVWVSD THFKN ++++A++ +HH T A W NGTV+R+ R ++ +V Sbjct: 85 LWIPSAANDLIQRIMIVAHCGSAGHRGHAALVATVRRLFYVDHLADRASEFLRDCLLCPHVKGGRVVHRPYAPRWHAKERNEGIHFDYLYMGEA--------FSGAKYVLVLKDDLTHYCELIACDGPTSQVCVDALVDWTKRFGMPRVWVSDQGTHFKNVAMKALAHKFKVHHDLTLAYCPWRNGTVERMNRDILQVMRV 277
BLAST of mRNA_H-paniculata_contig1402.2458.1 vs. uniprot
Match: W4GJ50_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GJ50_9STRA) HSP 1 Score: 102 bits (255), Expect = 3.890e-22 Identity = 62/201 (30.85%), Postives = 98/201 (48.76%), Query Frame = 1 Query: 1 IWTPDAAREMRGRLLV---CGEGGPR-------VVEATLYGLH---------RYCVIYT----GATVPRPLASTRRGMEAGEVMHFDFLHIEQSEIASVVDRQDGYKYVLVMEDEVNGLVRLALAKQCTAKFTSEELLRWCATYGMARVWVSDNATHFKNCVLRSVANELGIHHRFTAAESAWINGTVDRVMRKAIKTTKV 534 +W P AA ++ R++V CG G R + Y H R C++ G V +P A R E E +HFD+L++ ++ G KYVLV++D++ L T++ + L+ W +GM RVWVSD THFKN ++++A++ +HH T A W NGTV+R+ R ++ +V Sbjct: 908 LWIPSAANDLIQRIMVAAHCGSAGHRGHAALVATIRRQFYVDHLADRASEFLRGCLLCPRVKGGRVVHQPYAPRRHAKERNEGIHFDYLYMGEA--------FSGAKYVLVLKDDLTHYCELIACDGPTSQVCVDALVDWTKRFGMPRVWVSDQGTHFKNVAMKALAHKFKVHHDLTLAYCPWRNGTVERMNRDILQVMRV 1100 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1402.2458.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1402.2458.1 >prot_H-paniculata_contig1402.2458.1 ID=prot_H-paniculata_contig1402.2458.1|Name=mRNA_H-paniculata_contig1402.2458.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=169bp MRGRLLVCGEGGPRVVEATLYGLHRYCVIYTGATVPRPLASTRRGMEAGEback to top mRNA from alignment at H-paniculata_contig1402:11303..11902+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1402.2458.1 ID=mRNA_H-paniculata_contig1402.2458.1|Name=mRNA_H-paniculata_contig1402.2458.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=600bp|location=Sequence derived from alignment at H-paniculata_contig1402:11303..11902+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1402:11303..11902+ >mRNA_H-paniculata_contig1402.2458.1 ID=mRNA_H-paniculata_contig1402.2458.1|Name=mRNA_H-paniculata_contig1402.2458.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1014bp|location=Sequence derived from alignment at H-paniculata_contig1402:11303..11902+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |