prot_H-paniculata_contig1402.2458.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1402.2458.1
Unique Nameprot_H-paniculata_contig1402.2458.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length169
Homology
BLAST of mRNA_H-paniculata_contig1402.2458.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 3.360e-32
Identity = 72/190 (37.89%), Postives = 101/190 (53.16%), Query Frame = 0
Query:    4 RLLVCG---EGGPRVVEATLYGLHRYCVIY--------------------TGATVPRPLASTRRGMEAGEVMHFDFLHIEQSEIASV--VDRQDGYKYVLVMEDEVNGLVRLALAKQCTAKFTSEELLRWCATYGMARVWVSDNATHFKNCVLRSVANELGIHHRFTAAESAWINGTVDRVMRKAIKTTK 168
            RL+VC    E G R   ATL  L  YC  +                     G  VPRPL  T  G   GEV+HFD+L++  S       +D ++G+KY+LVM D+++  V L     CTA  T++ LL WC   G+  VWVSD A+HFKN ++ ++   LG+   F+ A S W NGT +R+MR+ ++T K
Sbjct: 1295 RLMVCAHMKEAGHRGAVATLQRLSEYCCWFRMEEHVTDFVKQCLHCMDSKAGEKVPRPLGETVHGTRPGEVVHFDYLYVGASGPLGDDGLDEEEGFKYILVMMDDMSNWVWLEPTGACTACLTAQHLLTWCKILGVPEVWVSDTASHFKNHMMAALETALGVDRNFSVANSPWSNGTCERMMREVVRTLK 1484          
BLAST of mRNA_H-paniculata_contig1402.2458.1 vs. uniprot
Match: A0A6G0X120_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X120_9STRA)

HSP 1 Score: 107 bits (268), Expect = 3.790e-24
Identity = 57/154 (37.01%), Postives = 86/154 (55.84%), Query Frame = 0
Query:   16 VEATLYG-LHRYCVIYTGATVPRPLASTRRGMEAGEVMHFDFLHIEQSEIASVVDRQDGYKYVLVMEDEVNGLVRLALAKQCTAKFTSEELLRWCATYGMARVWVSDNATHFKNCVLRSVANELGIHHRFTAAESAWINGTVDRVMRKAIKTTK 168
            +EA + G +H  CV   G  VPRP  S     +  E++HFD+L + ++        ++G+KYVLV++D+++G  RL  +    A+ T+E L+ W  TYG    WVSD  +HFKN V+  +   +G HH  T   S W NGTV+ V R  ++  K
Sbjct:  143 IEAFVKGCIHCLCV--DGVVVPRPWGSALHAEKPNELIHFDWLQLPEA--------KNGWKYVLVVKDDMSGFCRLYPSSTADAEKTAEALMDWFTTYGNVTTWVSDGGSHFKNEVVAKIQKLIGAHHHITTPHSPWANGTVEVVNRLILRCMK 286          
BLAST of mRNA_H-paniculata_contig1402.2458.1 vs. uniprot
Match: A0A6A3J1E7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3J1E7_9STRA)

HSP 1 Score: 107 bits (268), Expect = 4.860e-24
Identity = 53/143 (37.06%), Postives = 80/143 (55.94%), Query Frame = 0
Query:   26 YCVIYTGATVPRPLASTRRGMEAGEVMHFDFLHIEQSEIASVVDRQDGYKYVLVMEDEVNGLVRLALAKQCTAKFTSEELLRWCATYGMARVWVSDNATHFKNCVLRSVANELGIHHRFTAAESAWINGTVDRVMRKAIKTTK 168
            +C++  G  +PRP   T    +  E++HFDFL        S+++ +DG KYV V++D ++G V L       +  T   LL W   +G+ R+WVSD   HFKN V+  + + LG HH FT + + W NGTV  V R+ +K+ K
Sbjct:  503 HCMVTAGGKIPRPHGETLVATKPNELLHFDFL--------SMLEGEDGSKYVFVLKDGMSGYVELVPCIDAASDQTYASLLDWFKRFGVVRLWVSDQGAHFKNQVIVRLQSALGAHHHFTLSYTPWTNGTVKVVNREVLKSVK 637          
BLAST of mRNA_H-paniculata_contig1402.2458.1 vs. uniprot
Match: A0A6G0WYM7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYM7_9STRA)

HSP 1 Score: 107 bits (268), Expect = 5.140e-24
Identity = 57/154 (37.01%), Postives = 86/154 (55.84%), Query Frame = 0
Query:   16 VEATLYG-LHRYCVIYTGATVPRPLASTRRGMEAGEVMHFDFLHIEQSEIASVVDRQDGYKYVLVMEDEVNGLVRLALAKQCTAKFTSEELLRWCATYGMARVWVSDNATHFKNCVLRSVANELGIHHRFTAAESAWINGTVDRVMRKAIKTTK 168
            +EA + G +H  CV   G  VPRP  S     +  E++HFD+L + ++        ++G+KYVLV++D+++G  RL  +    A+ T+E L+ W  TYG    WVSD  +HFKN V+  +   +G HH  T   S W NGTV+ V R  ++  K
Sbjct:  668 IEAFVKGCIHCLCV--DGVVVPRPWGSALHAEKPNELIHFDWLQLPEA--------KNGWKYVLVVKDDMSGFCRLYPSSTADAEKTAEALMDWFTTYGNVTTWVSDGGSHFKNEVVAKIQKLIGAHHHITTPHSPWANGTVEVVNRLILRCMK 811          
BLAST of mRNA_H-paniculata_contig1402.2458.1 vs. uniprot
Match: A0A6G0QQ04_9STRA (Integrase catalytic domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6G0QQ04_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.280e-23
Identity = 57/156 (36.54%), Postives = 83/156 (53.21%), Query Frame = 0
Query:   13 PRVVEATLYGLHRYCVIYTGATVPRPLASTRRGMEAGEVMHFDFLHIEQSEIASVVDRQDGYKYVLVMEDEVNGLVRLALAKQCTAKFTSEELLRWCATYGMARVWVSDNATHFKNCVLRSVANELGIHHRFTAAESAWINGTVDRVMRKAIKTTK 168
            P  V   + G   Y V   G  +PRP   T    +  +++HFDFL        S+++ +DG KYV V++D ++G V L      T+  T   LL W   +G+ R+WVSD   HFKN V+  + + LG HH FT + + W NGTV  V R+ +K+ K
Sbjct:  749 PADVSTFVQGCLHYMVT-AGGKIPRPHGETLVATKPNDLLHFDFL--------SMLEGEDGSKYVFVLKDGMSGYVELVPCIDATSDQTYASLLDWFKRFGVVRLWVSDQGAHFKNQVIARLQSALGAHHHFTLSYTPWTNGTVKVVNREVLKSVK 895          
BLAST of mRNA_H-paniculata_contig1402.2458.1 vs. uniprot
Match: A0A8K1FDA4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FDA4_PYTOL)

HSP 1 Score: 106 bits (264), Expect = 1.760e-23
Identity = 55/152 (36.18%), Postives = 86/152 (56.58%), Query Frame = 0
Query:   14 RVVEATLYGLHRYCVIYTGATVPRPLASTRRGMEAGEVMHFDFLHIEQSEIASVVDRQDGYKYVLVMEDEVNGLVRLALAKQCTAKFTSEELLRWCATYGMARVWVSDNATHFKNCVLRSVANELGIHHRFTAAESAWINGTVDRVMRKAIK 165
            RVV+  L G      +  G  VPRP +   R  +  E +H+D+L++ +S           ++Y+LVM+D+    V L    + T+  T+E +L W + +G+ R+W+SDN +HFKN V+R V+  L  H  FT A S WING+V+RV +  I+
Sbjct:  737 RVVDRFLSGCLMCKHVKGGRVVPRPWSQKFRSHKRNEALHWDYLYLGES--------FGDFEYLLVMKDDATHYVELVPCAKPTSTVTAEAILDWHSRFGVPRIWISDNGSHFKNDVMRQVSRRLNCHQEFTLAYSPWINGSVERVNKDVIQ 880          
BLAST of mRNA_H-paniculata_contig1402.2458.1 vs. uniprot
Match: UPI001E1DBC25 (uncharacterized protein LOC123544734 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DBC25)

HSP 1 Score: 104 bits (260), Expect = 2.490e-23
Identity = 52/134 (38.81%), Postives = 77/134 (57.46%), Query Frame = 0
Query:   32 GATVPRPLASTRRGMEAGEVMHFDFLHIEQSEIASVVDRQDGYKYVLVMEDEVNGLVRLALAKQCTAKFTSEELLRWCATYGMARVWVSDNATHFKNCVLRSVANELGIHHRFTAAESAWINGTVDRVMRKAIK 165
            G   PRPL          EV+HFD+L++  S +        GYKY+L+++D+++G + L  AK   +  T + L  W AT+G+A +WVSD  +HFKN V+ S+   L   H FT A S W NGTV+R  R+ ++
Sbjct:   36 GHRTPRPLGQALHASLPNEVIHFDYLYMGPSGV--------GYKYLLLIKDDLSGYLWLVPAKAADSASTVDALTLWFATFGVAHIWVSDQGSHFKNQVMGSLRKALRAQHHFTTAYSPWANGTVERACREVLR 161          
BLAST of mRNA_H-paniculata_contig1402.2458.1 vs. uniprot
Match: A0A6A4Z074_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z074_9STRA)

HSP 1 Score: 101 bits (252), Expect = 6.550e-22
Identity = 50/143 (34.97%), Postives = 78/143 (54.55%), Query Frame = 0
Query:   26 YCVIYTGATVPRPLASTRRGMEAGEVMHFDFLHIEQSEIASVVDRQDGYKYVLVMEDEVNGLVRLALAKQCTAKFTSEELLRWCATYGMARVWVSDNATHFKNCVLRSVANELGIHHRFTAAESAWINGTVDRVMRKAIKTTK 168
            +C+   G  VPRP  +        E++HFD+L +  +         +G+KYVLV++D+++G  RL  +    A+ T+  L+ W AT+G+   WVSD  THFKN V+  +   +G HH  T   + W NGTV+ V R  ++  K
Sbjct:  254 HCLCVDGTMVPRPWGAALHAERPNELIHFDWLQLPPA--------GNGWKYVLVVKDDMSGFCRLFPSATADAESTANALMDWFATHGIVSTWVSDGGTHFKNEVVGKIKRMIGAHHHITTPYTPWANGTVEVVNRLILRGLK 388          
BLAST of mRNA_H-paniculata_contig1402.2458.1 vs. uniprot
Match: H3H3G8_PHYRM (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H3G8_PHYRM)

HSP 1 Score: 100 bits (249), Expect = 1.830e-21
Identity = 47/143 (32.87%), Postives = 78/143 (54.55%), Query Frame = 0
Query:   26 YCVIYTGATVPRPLASTRRGMEAGEVMHFDFLHIEQSEIASVVDRQDGYKYVLVMEDEVNGLVRLALAKQCTAKFTSEELLRWCATYGMARVWVSDNATHFKNCVLRSVANELGIHHRFTAAESAWINGTVDRVMRKAIKTTK 168
            +C++  G  +PRP   T +  +  E++HFD+L        ++++  +G KYVLV++D ++G V L      TA    + L+ W   +G+   WVSD   HF+N ++  +   LG+ H FT A + W NGTV  V R+ +K  +
Sbjct:  980 HCMMTAGDRIPRPFGETLKATKPNELLHFDYL--------TMIEGDNGMKYVLVLKDGMSGFVELISFADATADNAYQGLIDWFKRFGVEPQWVSDQGAHFRNQIIELLQRALGVQHHFTTAYTPWANGTVKVVNREILKCVR 1114          
BLAST of mRNA_H-paniculata_contig1402.2458.1 vs. uniprot
Match: R7Q542_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q542_CHOCR)

HSP 1 Score: 97.8 bits (242), Expect = 1.490e-20
Identity = 50/153 (32.68%), Postives = 81/153 (52.94%), Query Frame = 0
Query:   16 VEATLYGLHRYCVIYTGATVPRPLASTRRGMEAGEVMHFDFLHIEQSEIASVVDRQDGYKYVLVMEDEVNGLVRLALAKQCTAKFTSEELLRWCATYGMARVWVSDNATHFKNCVLRSVANELGIHHRFTAAESAWINGTVDRVMRKAIKTTK 168
            V+A + G +   V  TG  VPRPL     G    EV+H DFL++ Q             KY+L++ D+++  + L   +  TA   +E L  W   +G     VSD  +HFKN +++S+ +EL   H FT A S W NG+++R+ R+ +++ +
Sbjct:  323 VKALVRGCYHCIVTRTGEVVPRPLGHAIHGDRPNEVVHMDFLYMGQG--------LSNKKYLLILRDDLSSYIWLWPTEDTTAASAAEALCVWIGVFGCMEWMVSDQGSHFKNSLIKSLTDELRTKHHFTTAYSPWANGSIERMCREVLRSCR 467          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1402.2458.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5A5_9PHAE3.360e-3237.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6G0X120_9STRA3.790e-2437.01Uncharacterized protein n=2 Tax=Aphanomyces euteic... [more]
A0A6A3J1E7_9STRA4.860e-2437.06Uncharacterized protein n=1 Tax=Phytophthora rubi ... [more]
A0A6G0WYM7_9STRA5.140e-2437.01Uncharacterized protein n=2 Tax=Aphanomyces euteic... [more]
A0A6G0QQ04_9STRA1.280e-2336.54Integrase catalytic domain-containing protein n=5 ... [more]
A0A8K1FDA4_PYTOL1.760e-2336.18Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
UPI001E1DBC252.490e-2338.81uncharacterized protein LOC123544734 n=1 Tax=Merce... [more]
A0A6A4Z074_9STRA6.550e-2234.97Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
H3H3G8_PHYRM1.830e-2132.87Integrase catalytic domain-containing protein n=1 ... [more]
R7Q542_CHOCR1.490e-2032.68Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 42..168
e-value: 5.4E-18
score: 66.9
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 48..162
e-value: 2.9E-10
score: 40.4
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 34..169
score: 12.404
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 48..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1402contigH-paniculata_contig1402:11330..11902 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1402.2458.1mRNA_H-paniculata_contig1402.2458.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1402 11303..11902 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1402.2458.1 ID=prot_H-paniculata_contig1402.2458.1|Name=mRNA_H-paniculata_contig1402.2458.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=169bp
MRGRLLVCGEGGPRVVEATLYGLHRYCVIYTGATVPRPLASTRRGMEAGE
VMHFDFLHIEQSEIASVVDRQDGYKYVLVMEDEVNGLVRLALAKQCTAKF
TSEELLRWCATYGMARVWVSDNATHFKNCVLRSVANELGIHHRFTAAESA
WINGTVDRVMRKAIKTTKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf