mRNA_H-paniculata_contig14013.2454.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig14013.2454.1
Unique NamemRNA_H-paniculata_contig14013.2454.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig14013.2454.1 vs. uniprot
Match: A0A6D2IM54_9BRAS (Uncharacterized protein n=2 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2IM54_9BRAS)

HSP 1 Score: 273 bits (698), Expect = 4.730e-78
Identity = 174/469 (37.10%), Postives = 249/469 (53.09%), Query Frame = 1
Query:    1 VCSACENGKASKQPVKKYREERTTEQLELVHTDIAGPV-DKSFRGYRFATIFVDDYSRMCKIYTLRQNLEAPWALKQFERDVARANGLRIKRLGSDQGGKYTGKSFRLFCAENGIK*EFSAAYTPQQNDVVERSWRSIFEMTTAKMITANMGRRCWAEAVRSAIYCLNRAPTRSHDGATPYEKSHGEKPKLDHLRAFGCTAYVTFQSQQRRKLDDKAWAGAFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDE-----------EDFVTAASANPFSVLSDDDDDESNGDSTIKARENREEDSGATTRVAKVEGTGNLT----ETVSK----------------GEPKFAA----EAL-------------KGPKAGKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEEGSVARYKARLVAQGFSQVEGEYFFETSAPVARMSTLRAVFSLAAEH 1260
            +C  C  GK +++ + K    R +  L+LVHTDI GP+   S  G R+   F+DDYSR C  + L +  EA  A K+F+    R  GL +  L SD+GG+Y   +F+ +C ENGIK + +AAYTPQQN + ER  RSI  M    M+  ++ RR W EAV+ A++ LNR+P+ +    TP E+    KP ++H+R FGC AY     ++R KLD+K+    F+G   +S +YR+Y+P TK +  SR+VRFDE           +D V    A   S   D  ++    ++  +  E   E+  A T V + E T + T    ET  +                GE  F      EAL             +  K+ KWR AME E G++ EN TWE  +P   PA  K +  +WIFK K  E+G V ++KARLVA+G+ Q +G  F E  APVAR  T+RA+ + AA++
Sbjct:  473 LCDICMRGKQNRENIPKKSSWRASRALQLVHTDICGPIAPTSASGKRYIINFIDDYSRKCWSFLLAEKSEALRAFKEFKVAAEREMGLSLVSLRSDRGGEYNSAAFQDYCRENGIKRQLTAAYTPQQNGIAERKNRSIMNMARCMMLGMSVPRRFWPEAVQYAVHVLNRSPSAALGDVTPDERWSNHKPSVEHVRVFGCVAYALVPYERRVKLDEKSIQCVFVGVSKESKAYRLYNPETKKIIISRDVRFDESRKWDWEESALDDGVRWEEALTNSEAGDSGENNGEEETLNQPEEVDPENVNAPTEVTQAETTTDQTVAARETSGRQRQTPVWMKDYVSGTAGEASFFVIDDDEALMMYTTAEDPDTFEEAVKSEKWRKAMEAEIGSIEENQTWELVEP---PAEAKVIGVKWIFKTKFNEKGEVDKFKARLVAKGYHQRQGVDFHEVFAPVARWDTIRAILAKAAQN 938          
BLAST of mRNA_H-paniculata_contig14013.2454.1 vs. uniprot
Match: A0A151T355_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T355_CAJCA)

HSP 1 Score: 271 bits (693), Expect = 1.570e-77
Identity = 165/431 (38.28%), Postives = 240/431 (55.68%), Query Frame = 1
Query:    1 VCSACENGKASKQPVKKYREERTTEQLELVHTDIAGPVDK-SFRGYRFATIFVDDYSRMCKIYTLRQNLEAPWALKQFERDVARANGLRIKRLGSDQGGKYTGKSFRLFCAENGIK*EFSAAYTPQQNDVVERSWRSIFEMTTAKMITANMGRRCWAEAVRSAIYCLNRAPTRSHDGATPYEKSHGEKPKLDHLRAFGCTAYVTFQSQQRRKLDDKAWAGAFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDEEDF----VTAASANPFSVLSDDDDDESNGDSTIKARENREEDSGATTRVAKVEGTGNLTE-----TVSKGEPKFAAEA--LKGPKAGKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEEGSVARYKARLVAQGFSQVEGEYFFETSAPVARMSTLRAVFSLAAE 1257
            +C  C+ GK  K P  K    R TE+L+LVHTD+ GP+   S  G ++  +F+DDY+RM  ++ L++  +      +F+  V    GL++KRL SD G +YT   F+ FC + GI+ + +  YTPQQN V ER  R++ EM    +    + +  WAEAV +++Y LN  PT++  G TP+E  HG  P ++HL+ FGC  Y      +R KLD K+  G FLGY + S  YRIY+P TK +  SRNV+FDE        + A A+    L  D+  E N +S     +N ++D         V GT +L E      V+  EPK  AEA  L+G     WR AM+EE   + +N TW+  D    P  +K +  +W+++ KL  +GSV + KARLV +G+ Q  G  F +T APVAR  T+R + +LAA+
Sbjct:  429 LCDVCQYGKQRKLPFPKEASWRATEKLQLVHTDVCGPMSTTSLNGSKYFLLFIDDYTRMSWVFFLKKKSDVFANFLKFKFMVENETGLQVKRLRSDNGTEYTAGEFKKFCEQVGIQHQLTVPYTPQQNGVSERKNRTVMEMARCLLFEKGLPKTFWAEAVNTSVYLLNLLPTKALKGNTPFEAWHGRTPSVEHLKVFGCVCYALVPEVKRDKLDQKSEVGIFLGYSSYSKGYRIYNPATKKILVSRNVKFDELSRWNWEKSKAEASNKRQLEVDNLQEQNSESE---EQNLDDDD------FPVRGTRDLAEIYERCNVAALEPKEYAEAAELEG-----WRVAMQEEMNMIEKNNTWQLVD---RPINQKVIGLKWVYRTKLNYDGSVNKLKARLVVKGYHQQYGVDFLDTFAPVARHDTIRMLVALAAK 842          
BLAST of mRNA_H-paniculata_contig14013.2454.1 vs. uniprot
Match: UPI001F004464 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F004464)

HSP 1 Score: 268 bits (685), Expect = 2.460e-77
Identity = 161/446 (36.10%), Postives = 244/446 (54.71%), Query Frame = 1
Query:    1 VCSACENGKASKQPVKKYREERTTEQLELVHTDIAGPVDKSFRGY-RFATIFVDDYSRMCKIYTLRQNLEAPWALKQFERDVARANGLRIKRLGSDQGGKYTGKSFRLFCAENGIK*EFSAAYTPQQNDVVERSWRSIFEMTTAKMITANMGRRCWAEAVRSAIYCLNRAPTRSHDGATPYEKSHGEKPKLDHLRAFGCTAYVTFQSQQRRKLDDKAWAGAFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDEEDFVTAASANPF-SVLSDDDDDESNGDSTIKARENREEDSGATTR------------VAKVEGTGNLTETVSK------------GEPKFAAEALKGPKAGKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEEGSVARYKARLVAQGFSQVEGEYFFETSAPVARMSTLRAVFSLAAEH 1260
            +C  C  GK  ++   K    R  + LEL+HTDI GP+  S  G   +  +F+DD+SR   +Y L+Q  EA    K+F+  V + +GL IK + SD+GG++T + F+ FC ++GI+   +   +PQQN V ER  R+I +M  + + + N+ +  WAEAV  A+Y LNR+PTRS  G TP E   G KP + HLR FG  AY     + R KLDDK+ A  F+GYD++S  Y++Y+P T +L  SR+V FDEE     +S   F S++  +++++   +  ++        S    +            V +    G++ E   +             EP    EA++  K   WR AM+EE  ++ +N TWE      LP   KA+  +W++K K   +G + RYKARLVA+G+SQ  G  + E  APVAR+ T+R + SLAA++
Sbjct:  149 LCEGCLLGKQFRKSFPKKSSSRAQKPLELIHTDICGPIKPSSLGKSNYFLLFIDDFSRKTWVYFLKQKSEAFEVFKKFKAAVEKESGLHIKAMRSDRGGEFTSREFQNFCEKHGIRRPLTVPRSPQQNGVAERKNRTILDMARSMLKSKNLPKEFWAEAVACAVYLLNRSPTRSVWGKTPQESWSGRKPGISHLRVFGSKAYAHVPDETRSKLDDKSKAFIFIGYDSNSKGYKLYNPDTNNLVISRDVEFDEEGEWDFSSHEDFNSIMPTEEEEQPTAEQDVQQEPTTPLTSPTVVQDASPPSFLNERSVERARSLGDIYEDTERLENLTLLCLFADCEPVTFEEAVQSKK---WRDAMDEEIKSIEKNDTWELTS---LPKGHKAIGVKWVYKAKKNSKGEIERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQN 588          
BLAST of mRNA_H-paniculata_contig14013.2454.1 vs. uniprot
Match: A0A151TGQ2_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151TGQ2_CAJCA)

HSP 1 Score: 263 bits (671), Expect = 3.480e-75
Identity = 165/444 (37.16%), Postives = 245/444 (55.18%), Query Frame = 1
Query:    1 VCSACENGKASKQPVKKYREERTTEQLELVHTDIAGPVD-KSFRGYRFATIFVDDYSRMCKIYTLRQNLEAPWALKQFERDVARANGLRIKRLGSDQGGKYTGKSFRLFCAENGIK*EFSAAYTPQQNDVVERSWRSIFEMTTAKMITANMGRRCWAEAVRSAIYCLNRAPTRSHDGATPYEKSHGEKPKLDHLRAFGCTAYVTFQSQQRRKLDDKAWAGAFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDEE---DFVTAASANPFSVLSDDDDDESN-------------GDSTIKARENREEDSGATTRVAKV-EGTGNLTETV-----SKGEPKFAAEALKGPKAGKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEEGSVARYKARLVAQGFSQVEGEYFFETSAPVARMSTLRAVFSLAAEHD 1263
            VC  C  GK  +    K  + R  + LEL+HTD+ GP+  +S     +  +F+DD+SR   +Y L++  E     K+F+  V + +GL IK L SD+GG++T K F+ +C +NGI+ + +   +PQQN V ER  R+I EM  + + +  + +  WAEAV  A+Y  NR+PTRS  G TP E   G KP + HLR FG  A+V    ++R KLDDK+    F+GYD +S  Y++Y+P ++    SRNV FDEE   D+ T    + F    ++DD E                ++T++  E+  E       + ++ E T NL         +  EP    EA+ G K+  WR AM+EE  A+ +N TWE      LP    A+  +W++K K   +G V RYKARLVA+G+SQ  G  + E  APVAR+ T+R + SLAA+++
Sbjct:  433 VCEGCLLGKQFRLSFPKESDSRAQKPLELIHTDVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKESGLLIKALRSDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKKLPKEFWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPGISHLRVFGSIAHVHVPDEKRSKLDDKSEKYIFIGYDANSKGYKLYNPDSRKTIISRNVVFDEEGEWDWSTNCEDHTFFPCVEEDDVEQQQQXXXXXXXXXXXXNTTLQDYESSSERMPRFRSLQEIYEATENLDNVTLFCLFADCEPMNFQEAI-GKKS--WRNAMDEEIEAIKKNDTWELVS---LPKEHTAIGVKWVYKAKKDSKGEVQRYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNN 870          
BLAST of mRNA_H-paniculata_contig14013.2454.1 vs. uniprot
Match: UPI000A29CC5E (uncharacterized protein LOC110224828 n=1 Tax=Arabidopsis lyrata subsp. lyrata TaxID=81972 RepID=UPI000A29CC5E)

HSP 1 Score: 261 bits (668), Expect = 4.230e-75
Identity = 164/444 (36.94%), Postives = 236/444 (53.15%), Query Frame = 1
Query:    1 VCSACENGKASKQPVKKYREERTTEQLELVHTDIAGPVD-KSFRGYRFATIFVDDYSRMCKIYTLRQNLEAPWALKQFERDVARANGLRIKRLGSDQGGKYTGKSFRLFCAENGIK*EFSAAYTPQQNDVVERSWRSIFEMTTAKMITANMGRRCWAEAVRSAIYCLNRAPTRSHDGATPYEKSHGEKPKLDHLRAFGCTAYVTFQSQQRRKLDDKAWAGAFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDEE---DFVTAASANPFSVLSDDDDDESNGDSTIKAREN-----------REEDSGATTRVAKVEGTGNLTET---------VSKGEPKFAAEALKGPKAGKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEEGSVARYKARLVAQGFSQVEGEYFFETSAPVARMSTLRAVFSLAAEH 1260
            VC  C  GK  K    K    R  + LEL+HTD+ GP+  KS     +  +F+DD+SR   +Y L++  E     K+F+  V + +GL IK + SD+GG++T K F  +C +NGI+ + +   +PQQN V ER  R+I EM  + + +  + +  WAEAV  A+Y LNR+PT+S  G TP E   G KP + HLR FG  A+     ++R KLDDK+    F+GYDN+S  Y++Y+P TK    SRNV FDEE   D+ +      F    ++DD E   D   +                E  S  T     ++    +TE           ++ EP    EA++      WR AM+EE  A+ +N TWE      LP   KA+  +W++K K   +G V RYKARLVA+G+SQ     + E  APVAR+ T+R + SLAA++
Sbjct:  500 VCEGCLLGKQFKMSFPKESSTRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKRFKAHVEKESGLTIKSMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVAYAVYLLNRSPTKSISGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNVVFDEEEEWDWKSNEDDYNFFPHFEEDDSELTRDEPPREEPTTXXXXXXXXXGEESSSERTLHFRSLQELYEVTENQDNLTLFCLFAECEPMDFQEAIEKKT---WRNAMDEEIKAIKKNDTWELAS---LPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRARIDYDEVFAPVARLETVRLIISLAAQN 937          
BLAST of mRNA_H-paniculata_contig14013.2454.1 vs. uniprot
Match: A0A4Y1QWW3_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1QWW3_PRUDU)

HSP 1 Score: 260 bits (664), Expect = 7.360e-75
Identity = 172/443 (38.83%), Postives = 241/443 (54.40%), Query Frame = 1
Query:    1 VCSACENGKASKQPVKKYREERTTEQLELVHTDIAGPV-DKSFRGYRFATIFVDDYSRMCKIYTLRQNLEAPWALKQFERDVARANGLRIKRLGSDQGGKYTGKSFRLFCAENGIK*EFSAAYTPQQNDVVERSWRSIFEMTTAKMITANMGRRCWAEAVRSAIYCLNRAPTRSHDGATPYEKSHGEKPKLDHLRAFGCTAYVTFQSQQRRKLDDKAWAGAFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDE------EDF---VTAASANPFSVLSDDDD------------DESNGDST--IKARENREEDSGATTRVAKVEGTGNLTETVSKGEPKFAAEALKGPKAGKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEEGSVARYKARLVAQGFSQVEGEYFFETSAPVARMSTLRAVFSLAAE 1257
            +C  C  GK  + P  +    R    LELVH DI GP    SF   R+  +FVDD+SRM  +Y L Q  EA    KQF+      +G  +K L +D+GG++T   F  +C  NGIK E +A YTPQQN V ER  R+I EM  + +   ++    WAEA+ +A++ LNR+PT++    TP+E  H  KPK+D  + FGCTAY    SQ+R K D+K     F+GY + S +YR+ DPRTKSL  SR+V FDE      E++   V      P S  S++              D S+ DST  + AR         T  +A +  + +L   +S  EP+   EA+K      W+ AM+EE   + +N TWE  D    P  +  +  +W++K K  E+GS+ ++KARLVA+G+SQ  G  F ET APV RM T+R V +LAA+
Sbjct:  158 ICEGCIFGKFHRLPFSQSSW-RAKAPLELVHADICGPTRTPSFNNKRYFILFVDDFSRMMWVYFLEQKSEAFSVFKQFKAFGENQSGHNLKVLRTDRGGEFTSNEFSEYCKSNGIKRELTARYTPQQNGVAERRNRTIVEMARSMLKAKSLPNTFWAEAIHTAVFILNRSPTKAVKDKTPFEAWHRFKPKVDFFKIFGCTAYAHIPSQKREKFDEKGEKYIFVGYSDQSKAYRLIDPRTKSLVISRDVIFDELKAWKWENYDIEVPRFFEEPDSSHSEETQFLQSPIPSAGTADPSSPDSTPRLNAR---------TRSLADIYESCDLA--LSALEPQKFEEAVK---ENIWQDAMDEEIRVIKKNRTWELVD---RPKSKDIIGLKWVYKTKFNEDGSIQKHKARLVAKGYSQQPGIDFNETFAPVVRMETIRTVLALAAQ 582          
BLAST of mRNA_H-paniculata_contig14013.2454.1 vs. uniprot
Match: A0A1W7R6D9_AEDAL (Putative polyprotein (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6D9_AEDAL)

HSP 1 Score: 258 bits (659), Expect = 7.830e-75
Identity = 169/468 (36.11%), Postives = 245/468 (52.35%), Query Frame = 1
Query:    1 VCSACENGKASKQPVKKYREERTTEQLELVHTDIAGPVDKSFRGYRFATIFVDDYSRMCKIYTLRQNLEAPWALKQFERDVARANGLRIKRLGSDQGGKYTGKSFRLFCAENGIK*EFSAAYTPQQNDVVERSWRSIFEMTTAKMITANMGRRCWAEAVRSAIYCLNRAPTRSHDGATPYEKSHGEKPKLDHLRAFGCTAYVTFQSQQRRKLDDKAWAGAFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDEEDFVT---AASANPFSVLSDDDDD-----------ESNGDSTIKARENREE-----DSGATTRVAKVEGTGN--------------------------LTETVSKG-----EPKFAAEALKGPKAGKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEEGSVARYKARLVAQGFSQVEGEYFFETSAPVARMSTLRAVFSLAA 1254
             C  C   K ++    +  E+ + E L++VH+D+ GP+ ++  G R+    +DD+SR   +Y L++  E    ++ + R      G + K + SD+GG+YT KS R F AE GIK EF+A Y PQQN V ER  R++ EM    ++ A + +R WAEAV +A Y  NR P+ +  G TP+E   G KP L+ ++ FGCTAY     Q+R+K + KA    F+GY +++ +YR+ D RT  +  SR+VRF E D VT   A S +P  V  D D +           +   D+T     + EE     DS +     ++ G  N                            ET+        EPK  AEAL  P++ KW+AAM EE  +L+E  TW   D  +LPA RKA+ +RW++KRK    G V R+KARLVAQGF Q  G  + +  APV R +T R V ++A+
Sbjct:  282 TCECCIKAKMARPSFPQVAEKTSKEVLDIVHSDVCGPMTETPGGCRYYMTMIDDHSRYTMVYFLKEKSEVEARIRDYVRFTQNQLGKKPKVIRSDRGGEYTSKSIRKFYAEEGIKPEFTAGYAPQQNGVAERKNRTLNEMGLCMLLDAGLPKRFWAEAVNTAAYIQNRLPSTAV-GKTPFEHWFGRKPDLNGMKIFGCTAYAWIPPQKRKKFEVKAEKLTFVGYSSENKAYRLLDARTGRIVVSRDVRFVEFDGVTPTEAISTDPEEVKRDADAEMFVRLENTVPVDLAADNTKNRSIDSEEEFFGCDSSSDDGEGRLLGLENEPVQEELDPVGLRRSARSNIGQPPERYRETIGLAAAVACEPKSYAEALASPESDKWKAAMAEEMASLMEKDTW---DVVQLPADRKAIGSRWVYKRKESANGDVVRFKARLVAQGFRQKFGSEYDQVFAPVVRQTTFRTVLTVAS 745          
BLAST of mRNA_H-paniculata_contig14013.2454.1 vs. uniprot
Match: A0A6A2WSU7_HIBSY (Integrase catalytic domain-containing protein n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WSU7_HIBSY)

HSP 1 Score: 263 bits (672), Expect = 9.870e-75
Identity = 166/454 (36.56%), Postives = 236/454 (51.98%), Query Frame = 1
Query:    1 VCSACENGKASKQPVKKYREERTTEQLELVHTDIAGPVD-KSFRGYRFATIFVDDYSRMCKIYTLRQNLEAPWALKQFERDVARANGLRIKRLGSDQGGKYTGKSFRLFCAENGIK*EFSAAYTPQQNDVVERSWRSIFEMTTAKMITANMGRRCWAEAVRSAIYCLNRAPTRSHDGATPYEKSHGEKPKLDHLRAFGCTAYVTFQSQQRRKLDDKAWAGAFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDEEDF--------------------------VTAASANPFSVLSDDDDDESNGDSTIKARENREEDSGATTRVAKVEGTGNLTET--------VSKGEPKFAAEALKGPKAGKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEEGSVARYKARLVAQGFSQVEGEYFFETSAPVARMSTLRAVFSLAAE 1257
            +C AC  GK  +Q  K  R  R    LE+VHTDIAGP D  S  G R+   F+DD+SR C IY L++  EA   LK+F+    + +G  +K L SD+GG+YT K F  FC E+GI  + +A YTPQQN V ER  R+I +M  + +    + R  WAEAVR A+Y LNR PT+S    TP E   G+KP + H + FGC AY       R+KLDD+     F+GYD  S +YR+Y+P TK +  SR+V FDE D+                            A   +P   L       S+  + I+  E    +   +TR  ++    N  E         +   +P    EA++  K   WR AM+EE  ++  N TWE     R P     +  +W++K K+ +EG+V +YKARLV +G+ Q +G  + E  APVAR+ T+R + ++A +
Sbjct:  364 LCEACIKGKQHRQSFKVGRSGRAQRLLEIVHTDIAGPFDIPSLGGNRYYLTFIDDFSRKCWIYILKEKSEALEKLKEFKAMAEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTARYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHFKIFGCIAYAHVPEHTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKIIISRDVEFDEADYWRWSEEEKKVEGLFFEDKDGDLINQDEQADDQDPRQNLPSSSSSSSDASNIIEDPEAPPTELQRSTRERRMPERYNDYELNNVSLFCLLVNSDPITYEEAVEDDK---WRNAMDEEIASIERNDTWELT---RQPEGHNPIGVKWVYKTKINKEGNVEKYKARLVVKGYKQRQGIDYDEVFAPVARIETIRLLTAVATQ 811          
BLAST of mRNA_H-paniculata_contig14013.2454.1 vs. uniprot
Match: A0A151RPT4_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RPT4_CAJCA)

HSP 1 Score: 263 bits (671), Expect = 2.140e-74
Identity = 165/444 (37.16%), Postives = 245/444 (55.18%), Query Frame = 1
Query:    1 VCSACENGKASKQPVKKYREERTTEQLELVHTDIAGPVD-KSFRGYRFATIFVDDYSRMCKIYTLRQNLEAPWALKQFERDVARANGLRIKRLGSDQGGKYTGKSFRLFCAENGIK*EFSAAYTPQQNDVVERSWRSIFEMTTAKMITANMGRRCWAEAVRSAIYCLNRAPTRSHDGATPYEKSHGEKPKLDHLRAFGCTAYVTFQSQQRRKLDDKAWAGAFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDEE---DFVTAASANPFSVLSDDDDDESN-------------GDSTIKARENREEDSGATTRVAKV-EGTGNLTETV-----SKGEPKFAAEALKGPKAGKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEEGSVARYKARLVAQGFSQVEGEYFFETSAPVARMSTLRAVFSLAAEHD 1263
            VC  C  GK  +    K  + R  + LEL+HTD+ GP+  +S     +  +F+DD+SR   +Y L++  E     K+F+  V + +GL IK L SD+GG++T K F+ +C +NGI+ + +   +PQQN V ER  R+I EM  + + +  + +  WAEAV  A+Y  NR+PTRS  G TP E   G KP + HLR FG  A+V    ++R KLDDK+    F+GYD +S  Y++Y+P ++    SRNV FDEE   D+ T    + F    ++DD E                ++T++  E+  E       + ++ E T NL         +  EP    EA+ G K+  WR AM+EE  A+ +N TWE      LP    A+  +W++K K   +G V RYKARLVA+G+SQ  G  + E  APVAR+ T+R + SLAA+++
Sbjct:  499 VCEGCLLGKQFRLSFPKESDSRAQKPLELIHTDVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKESGLLIKALRSDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKKLPKEFWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPGISHLRVFGSIAHVHVPDEKRSKLDDKSEKYIFIGYDANSKGYKLYNPDSRKTIISRNVVFDEEGEWDWSTNCEDHTFFPCVEEDDVEQQQQXXXXXXXXXXXXNTTLQDYESSSERMPRFRSLQEIYEATENLDNVTLFCLFADCEPMNFQEAI-GKKS--WRNAMDEEIEAIKKNDTWELVS---LPKEHTAIGVKWVYKAKKDSKGEVQRYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNN 936          
BLAST of mRNA_H-paniculata_contig14013.2454.1 vs. uniprot
Match: V9H0W6_ARATH (Lectin receptor kinase (Fragment) n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=V9H0W6_ARATH)

HSP 1 Score: 252 bits (644), Expect = 4.480e-74
Identity = 154/423 (36.41%), Postives = 230/423 (54.37%), Query Frame = 1
Query:   64 RTTEQLELVHTDIAGPVD-KSFRGYRFATIFVDDYSRMCKIYTLRQNLEAPWALKQFERDVARANGLRIKRLGSDQGGKYTGKSFRLFCAENGIK*EFSAAYTPQQNDVVERSWRSIFEMTTAKMITANMGRRCWAEAVRSAIYCLNRAPTRSHDGATPYEKSHGEKPKLDHLRAFGCTAYVTFQSQQRRKLDDKAWAGAFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDEE---DFVTAASANPFSVLSDDDDDESNGDSTIKAREN-----------REEDSGATTRVAKVEGTGNLTET---------VSKGEPKFAAEALKGPKAGKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEEGSVARYKARLVAQGFSQVEGEYFFETSAPVARMSTLRAVFSLAAEH 1260
            ++T+ +EL+HTD+ GP+  KS     +  +F+DD+SR   +Y L++  E     K+F+  V + +GL IK + SD GG++T K F  +C +NGI+ + +   +PQQN V ER  R+I EM  + + +  + +  WAEAV  A+Y LNR+PT+S  G TP E   G KP + HLR FG  A+     ++R KLDDK+    F+GYDN+S  Y++Y+P TK    SRN+ FDEE   D+ +      F    ++D  E   +                    E  S  T R   ++    +TE           ++ EP    EA++      WR AM+EE  ++ +N TWE      LP   KA+  +W++K K   +G V RYKARLVA+G+SQ  G  + E  APVAR+ T+R + SLAA++
Sbjct:   19 KSTKTVELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKPEPTREEPPSEEPTTXXXXXXXXQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEKKT---WRNAMDEEIKSIQKNDTWELTS---LPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQN 435          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14013.2454.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6D2IM54_9BRAS4.730e-7837.10Uncharacterized protein n=2 Tax=Microthlaspi errat... [more]
A0A151T355_CAJCA1.570e-7738.28Retrovirus-related Pol polyprotein from transposon... [more]
UPI001F0044642.460e-7736.10DDE-type integrase/transposase/recombinase n=1 Tax... [more]
A0A151TGQ2_CAJCA3.480e-7537.16Retrovirus-related Pol polyprotein from transposon... [more]
UPI000A29CC5E4.230e-7536.94uncharacterized protein LOC110224828 n=1 Tax=Arabi... [more]
A0A4Y1QWW3_PRUDU7.360e-7538.83Transposable element protein n=1 Tax=Prunus dulcis... [more]
A0A1W7R6D9_AEDAL7.830e-7536.11Putative polyprotein (Fragment) n=1 Tax=Aedes albo... [more]
A0A6A2WSU7_HIBSY9.870e-7536.56Integrase catalytic domain-containing protein n=2 ... [more]
A0A151RPT4_CAJCA2.140e-7437.16Retrovirus-related Pol polyprotein from transposon... [more]
V9H0W6_ARATH4.480e-7436.41Lectin receptor kinase (Fragment) n=1 Tax=Arabidop... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14013contigH-paniculata_contig14013:879..2463 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score158.7
Seed ortholog evalue4.1e-36
Seed eggNOG ortholog7070.TC009115-PA
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs38DPC@33154,3BGB6@33208,3D5G4@33213,3SKEY@50557,41ZUZ@6656,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelInsecta
Best eggNOG OGNA|NA|NA
Exons3
Model size1272
Cds size855
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14013.2454.1prot_H-paniculata_contig14013.2454.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig14013 879..2046 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929113.9822288-CDS-H-paniculata_contig14013:878..13061622929113.9822288-CDS-H-paniculata_contig14013:878..1306Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14013 879..1306 -
1691480736.8172863-CDS-H-paniculata_contig14013:878..13061691480736.8172863-CDS-H-paniculata_contig14013:878..1306Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14013 879..1306 -
1622929113.9988172-CDS-H-paniculata_contig14013:1438..15131622929113.9988172-CDS-H-paniculata_contig14013:1438..1513Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14013 1439..1513 -
1691480736.8276153-CDS-H-paniculata_contig14013:1438..15131691480736.8276153-CDS-H-paniculata_contig14013:1438..1513Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14013 1439..1513 -
1622929114.0153408-CDS-H-paniculata_contig14013:1694..20461622929114.0153408-CDS-H-paniculata_contig14013:1694..2046Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14013 1695..2046 -
1691480736.8417296-CDS-H-paniculata_contig14013:1694..20461691480736.8417296-CDS-H-paniculata_contig14013:1694..2046Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14013 1695..2046 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929114.0315273-UTR-H-paniculata_contig14013:2046..24631622929114.0315273-UTR-H-paniculata_contig14013:2046..2463Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14013 2047..2463 -
1691480736.850217-UTR-H-paniculata_contig14013:2046..24631691480736.850217-UTR-H-paniculata_contig14013:2046..2463Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14013 2047..2463 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig14013.2454.1

>prot_H-paniculata_contig14013.2454.1 ID=prot_H-paniculata_contig14013.2454.1|Name=mRNA_H-paniculata_contig14013.2454.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=285bp
MTTAKMITANMGRRCWAEAVRSAIYCLNRAPTRSHDGATPYEKSHGEKPK
LDHLRAFGCTAYVTFQSQQRRKLDDKAWAGAFLGYDNDSPSYRIYDPRTK
SLQFSRNVRFDEEDFVTAASANPFSVLSDDDDDESNGDSTIKARENREED
SGATTRVAKVEGTGNLTETVSKGEPKFAAEALKGPKAGKWRAAMEEEWGA
LVENGTWESEDPGRLPARRKALLTRWIFKRKLKEEGSVARYKARLVAQGF
SQVEGEYFFETSAPVARMSTLRAVFSLAAEHDSN*
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mRNA from alignment at H-paniculata_contig14013:879..2463-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig14013.2454.1 ID=mRNA_H-paniculata_contig14013.2454.1|Name=mRNA_H-paniculata_contig14013.2454.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1585bp|location=Sequence derived from alignment at H-paniculata_contig14013:879..2463- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTCTGCTCGGCGTGTGAAAATGGGAAAGCGTCGAAGCAGCCTGTGAAAAA ATATCGAGAAGAGCGGACGACCGAGCAGTTGGAGCTGGTGCACACTGACA TAGCCGGACCGGTGGACAAGTCCTTCAGAGGATATCGCTTCGCCACCATC TTCGTCGACGACTATAGCAGGATGTGCAAAATCTACACCTTGCGACAAAA TTTGGAGGCGCCATGGGCCCTGAAGCAATTCGAGAGGGATGTAGCGAGGG CAAACGGTTTGCGGATTAAGCGCCTTGGGTCGGATCAGGGAGGAAAATAT ACTGGGAAATCGTTTAGGCTATTCTGCGCGGAAAATGGCATCAAGTAAGA GTTCTCTGCCGCCTACACACCGCAACAAAACGATGTGGTGGAGCGCAGCT GGCGCAGCATTTTCGAGATGACAACAGCCAAGATGATCACCGCCAACATG GGTCGTCGATGTTGGGCGGAAGCGGTGCGCTCGGCAATATACTGCCTAAA TCGTGCACCGACCCGATCGCACGACGGAGCAACACCGTACGAAAAATCGC ACGGCGAGAAACCAAAGTTGGACCACCTTCGCGCCTTCGGCTGCACGGCA TATGTTACGTTCCAGTCGCAGCAAAGACGCAAGCTCGACGACAAAGCATG GGCGGGGGCGTTCTTGGGGTACGATAACGACAGCCCGAGTTATCGCATAT ACGACCCGAGAACCAAGAGCCTCCAGTTTAGTAGGAACGTGAGATTTGAC GAAGAGGACTTCGTAACCGGTCATCGCGGACAGCAAGCACGACGGGACGC GCAACATGGAAGATTTTTCGGCACCATCGCCAGTCACGCCAGCGGTCACT CGATCCCGCGCCCAAGGCGAGCAAGGAAGCGTAACTAACACGGAAGGCCA GACGTTGACGTCACAAATGCCGCCGATATTGCCGGCACATTCGCTGCCAG CCGCCAGCGCAAACCCATTCAGTGTCTTGAGCGATGATGATGATGACGAA AGTAACGGGGACTCCACGATAAAGGGTGCGGAGCCCGAAGTCGACGCATC ATCAGCAGGAGCAGCCGCACTCGCGTCGCGGGGGAACACCACGAAGTAGT CAGGGATGGAGGCGCAGCGTCCGCGAGATCGTTCACCGATACCAACACGG GCGAGAGCGAGGGAAAACCGCGAAGAAGATTCAGGCGCTACCACGCGCGT GGCTAAAGTGGAAGGCACCGGCAACCTTACAGAGACGGTATCTAAGGGGG AGCCGAAATTCGCGGCAGAAGCATTAAAGGGTCCAAAGGCGGGAAAATGG CGCGCGGCAATGGAGGAAGAATGGGGAGCGTTGGTGGAAAATGGGACATG GGAAAGCGAAGACCCGGGGAGGTTACCGGCAAGGCGGAAGGCGCTTCTTA CGAGATGGATTTTCAAGCGGAAACTGAAGGAGGAAGGCAGTGTGGCACGC TACAAAGCGCGACTGGTGGCTCAAGGTTTTTCACAGGTGGAGGGTGAATA TTTCTTTGAAACCAGTGCCCCCGTTGCTCGCATGTCGACTTTACGTGCTG TTTTCAGCCTGGCCGCAGAACATGATTCGAATTAG
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Coding sequence (CDS) from alignment at H-paniculata_contig14013:879..2463-

>mRNA_H-paniculata_contig14013.2454.1 ID=mRNA_H-paniculata_contig14013.2454.1|Name=mRNA_H-paniculata_contig14013.2454.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1710bp|location=Sequence derived from alignment at H-paniculata_contig14013:879..2463- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACAACAGCCAAGATGATCACCGCCAACATGGGTCGTCGATGTTGGGC
GGAAGCGGTGCGCTCGGCAATATACTGCCTAAATCGTGCACCGACCCGAT
CGCACGACGGAGCAACACCGTACGAAAAATCGCACGGCGAGAAACCAAAG
TTGGACCACCTTCGCGCCTTCGGCTGCACGGCATATGTTACGTTCCAGTC
GCAGCAAAGACGCAAGCTCGACGACAAAGCATGGGCGGGGGCGTTCTTGG
GGTACGATAACGACAGCCCGAGTTATCGCATATACGACCCGAGAACCAAG
AGCCTCCAGTTTAGTAGGAACGTGAGATTTGACGAAGAGGACTTCGTAAC
CGATGACAACAGCCAAGATGATCACCGCCAACATGGGTCGTCGATGTTGG
GCGGAAGCGGTGCGCTCGGCAATATACTGCCTAAATCGTGCACCGACCCG
ATCGCACGACGGAGCAACACCGTACGAAAAATCGCACGGCGAGAAACCAA
AGTTGGACCACCTTCGCGCCTTCGGCTGCACGGCATATGTTACGTTCCAG
TCGCAGCAAAGACGCAAGCTCGACGACAAAGCATGGGCGGGGGCGTTCTT
GGGGTACGATAACGACAGCCCGAGTTATCGCATATACGACCCGAGAACCA
AGAGCCTCCAGTTTAGTAGGAACGTGAGATTTGACGAAGAGGACTTCGTA
ACCGCCGCCAGCGCAAACCCATTCAGTGTCTTGAGCGATGATGATGATGA
CGAAAGTAACGGGGACTCCACGATAAAGGCCGCCAGCGCAAACCCATTCA
GTGTCTTGAGCGATGATGATGATGACGAAAGTAACGGGGACTCCACGATA
AAGGCGAGGGAAAACCGCGAAGAAGATTCAGGCGCTACCACGCGCGTGGC
TAAAGTGGAAGGCACCGGCAACCTTACAGAGACGGTATCTAAGGGGGAGC
CGAAATTCGCGGCAGAAGCATTAAAGGGTCCAAAGGCGGGAAAATGGCGC
GCGGCAATGGAGGAAGAATGGGGAGCGTTGGTGGAAAATGGGACATGGGA
AAGCGAAGACCCGGGGAGGTTACCGGCAAGGCGGAAGGCGCTTCTTACGA
GATGGATTTTCAAGCGGAAACTGAAGGAGGAAGGCAGTGTGGCACGCTAC
AAAGCGCGACTGGTGGCTCAAGGTTTTTCACAGGTGGAGGGTGAATATTT
CTTTGAAACCAGTGCCCCCGTTGCTCGCATGTCGACTTTACGTGCTGTTT
TCAGCCTGGCCGCAGAACATGATTCGAATTAGCGAGGGAAAACCGCGAAG
AAGATTCAGGCGCTACCACGCGCGTGGCTAAAGTGGAAGGCACCGGCAAC
CTTACAGAGACGGTATCTAAGGGGGAGCCGAAATTCGCGGCAGAAGCATT
AAAGGGTCCAAAGGCGGGAAAATGGCGCGCGGCAATGGAGGAAGAATGGG
GAGCGTTGGTGGAAAATGGGACATGGGAAAGCGAAGACCCGGGGAGGTTA
CCGGCAAGGCGGAAGGCGCTTCTTACGAGATGGATTTTCAAGCGGAAACT
GAAGGAGGAAGGCAGTGTGGCACGCTACAAAGCGCGACTGGTGGCTCAAG
GTTTTTCACAGGTGGAGGGTGAATATTTCTTTGAAACCAGTGCCCCCGTT
GCTCGCATGTCGACTTTACGTGCTGTTTTCAGCCTGGCCGCAGAACATGA
TTCGAATTAG
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