prot_H-paniculata_contig14013.2454.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14013.2454.1
Unique Nameprot_H-paniculata_contig14013.2454.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length285
Homology
BLAST of mRNA_H-paniculata_contig14013.2454.1 vs. uniprot
Match: A0A8J6CTJ0_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6CTJ0_9ROSI)

HSP 1 Score: 174 bits (440), Expect = 2.140e-45
Identity = 105/285 (36.84%), Postives = 158/285 (55.44%), Query Frame = 0
Query:    1 MTTAKMITANMGRRCWAEAVRSAIYCLNRAPTRSHDGATPYEKSHGEKPKLDHLRAFGCTAYVTFQSQQRRKLDDKAWAGAFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDEEDFVTAASANPFSVLSDDDDDESNGDSTIKARENREEDSGATTRVAKVEGTGNLTETVSKG-----EPKFAAEALKGPKAGKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEEGSVARYKARLVAQGFSQVEGEYFFETSAPVARMSTLRAVFSLAAE 280
            M    +  A M    WAEAV +++Y LNR PT +  G TP+E   G+KP + HLR FGC  Y    ++++ KL+ ++  G F+GY +    YRI+DP TK +  SR+V+F+EE +      N  S+L +D +      + I+A    + D       A + GT  L +   +      EP   AEA+K      W+ AME E   + +N TWE  +    P  RK +  +W+F+ K   +GS+ ++KARLV +G+SQ +G  FFET APVAR+ T+R +F+LAA+
Sbjct:  448 MAKCLLFEAKMPNNFWAEAVNTSVYLLNRLPTNAVKGKTPFEAWFGQKPIMSHLRVFGCLCYALVPAEKKTKLEKRSIPGVFVGYSSVKKGYRIFDPLTKKIIVSRDVKFNEEGYWKWDGTNA-SLLEEDQNSPDLQPTEIEAEAEDDYDD------APIRGTRILADIYERCAMTLVEPSCYAEAVKDKC---WQEAMEAELKMIQKNDTWELVN---RPENRKVIGVKWVFRTKTNSDGSLKKHKARLVVKGYSQQQGVDFFETFAPVARLDTIRLLFTLAAQ 719          
BLAST of mRNA_H-paniculata_contig14013.2454.1 vs. uniprot
Match: A0A8J5YXK5_9ROSI (Uncharacterized protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YXK5_9ROSI)

HSP 1 Score: 173 bits (438), Expect = 4.220e-45
Identity = 105/285 (36.84%), Postives = 158/285 (55.44%), Query Frame = 0
Query:    1 MTTAKMITANMGRRCWAEAVRSAIYCLNRAPTRSHDGATPYEKSHGEKPKLDHLRAFGCTAYVTFQSQQRRKLDDKAWAGAFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDEEDFVTAASANPFSVLSDDDDDESNGDSTIKARENREEDSGATTRVAKVEGTGNLTETVSKG-----EPKFAAEALKGPKAGKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEEGSVARYKARLVAQGFSQVEGEYFFETSAPVARMSTLRAVFSLAAE 280
            M    +  A M    WAEAV +++Y LNR PT +  G TP+E   G+KP + HLR FGC  Y    +++R KL+ ++  G F+GY +    YRI+DP TK +  SR+V+F+EE +      N  S+L +D +      + I+A  + + D       A + GT  L +   +      EP   AE +K  K   W+ A+E E   + +N TWE  +    P  RK +  +W+F+ K   +GS+  +KARLV +G+SQ +G  FFET APVAR+ T+R +F+LAA+
Sbjct:  524 MARCLLFDAKMPNNFWAEAVNTSVYLLNRLPTNAVKGKTPFEAWFGQKPTMSHLRVFGCLCYALVPAEKRTKLEKRSMPGVFVGYSSVKKGYRIFDPLTKKIIVSRDVKFNEEGYWKWDGTNA-SLLEEDQNSPDLQPTEIEAEVDDDYDD------APIRGTRTLADIYERCAMIIVEPSCYAEVVK-EKC--WQEALEAELKMIQKNDTWELVN---RPENRKVIGVKWVFRTKTNSDGSLNEHKARLVVKGYSQQQGVDFFETFAPVARLDTIRFLFALAAQ 795          
BLAST of mRNA_H-paniculata_contig14013.2454.1 vs. uniprot
Match: A0A085N6C0_9BILA (Uncharacterized protein n=1 Tax=Trichuris suis TaxID=68888 RepID=A0A085N6C0_9BILA)

HSP 1 Score: 171 bits (434), Expect = 1.550e-44
Identity = 106/295 (35.93%), Postives = 156/295 (52.88%), Query Frame = 0
Query:    6 MITANMGRRCWAEAVRSAIYCLNRAPTRSHDGATPYEKSHGEKPKLDHLRAFGCTAYVTFQSQQRRKLDDKAWAGAFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDEEDFVTAASANPFSVLSDDDDDESNGDSTIKARENREEDSGATTRVAKVEGTGNL------------------TETVSKGEPKFAAEALKGPKAGKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEEGSVARYKARLVAQGFSQVEGEYFFETSAPVARMSTLRAVFSLAAEHD 282
            + T N+ +  WAEAV +A Y +NR P R  + ATPYE+  G++P + HLR FGC AYV   +Q R+KLD KA    F+GY   +  YRIYD R   ++   +V+F+E                   +DE+  +S  K     ++++G      +  G+ N                   +  + + +P    EAL+ P+A KW+ AM EE  AL +N TW   +   LP  RK +  +W+FK K+  +G V RYKARLVA+GF+Q     +FET APVAR  ++R V ++AA+ D
Sbjct:  692 LCTRNLPKSLWAEAVYTAAYLMNRVPNRKENTATPYERWFGKRPSVGHLRVFGCDAYVHVPAQHRKKLDPKARKVVFVGYGLSNKIYRIYDSRKHRVEEVTDVKFNESLVKKVVLFEGEEAKWIPTEDENQTESLQKCTGTDKKEAGLKRGPGRPPGSKNWERPSLPLTMELRPRQCNPSAMLVRADPGSVEEALRCPEAHKWKEAMNEEIDALQKNNTWALTE---LPPDRKTVQCKWVFKTKVNPKGGVDRYKARLVAKGFTQRPEIDYFETFAPVARYDSIRTVLAIAADED 983          
BLAST of mRNA_H-paniculata_contig14013.2454.1 vs. uniprot
Match: UPI001F004464 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F004464)

HSP 1 Score: 169 bits (428), Expect = 8.020e-44
Identity = 108/306 (35.29%), Postives = 162/306 (52.94%), Query Frame = 0
Query:    1 MTTAKMITANMGRRCWAEAVRSAIYCLNRAPTRSHDGATPYEKSHGEKPKLDHLRAFGCTAYVTFQSQQRRKLDDKAWAGAFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDEEDFVTAASANPF-SVLSDDDDDESNGDSTIKARENREEDSGATTR------------VAKVEGTGNLTETVSK------------GEPKFAAEALKGPKAGKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEEGSVARYKARLVAQGFSQVEGEYFFETSAPVARMSTLRAVFSLAAEH 281
            M  + + + N+ +  WAEAV  A+Y LNR+PTRS  G TP E   G KP + HLR FG  AY     + R KLDDK+ A  F+GYD++S  Y++Y+P T +L  SR+V FDEE     +S   F S++  +++++   +  ++        S    +            V +    G++ E   +             EP    EA++  K   WR AM+EE  ++ +N TWE      LP   KA+  +W++K K   +G + RYKARLVA+G+SQ  G  + E  APVAR+ T+R + SLAA++
Sbjct:  289 MARSMLKSKNLPKEFWAEAVACAVYLLNRSPTRSVWGKTPQESWSGRKPGISHLRVFGSKAYAHVPDETRSKLDDKSKAFIFIGYDSNSKGYKLYNPDTNNLVISRDVEFDEEGEWDFSSHEDFNSIMPTEEEEQPTAEQDVQQEPTTPLTSPTVVQDASPPSFLNERSVERARSLGDIYEDTERLENLTLLCLFADCEPVTFEEAVQSKK---WRDAMDEEIKSIEKNDTWELTS---LPKGHKAIGVKWVYKAKKNSKGEIERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQN 588          
BLAST of mRNA_H-paniculata_contig14013.2454.1 vs. uniprot
Match: A0A498M2F0_LABRO (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498M2F0_LABRO)

HSP 1 Score: 168 bits (425), Expect = 9.580e-44
Identity = 104/281 (37.01%), Postives = 155/281 (55.16%), Query Frame = 0
Query:    9 ANMGRRCWAEAVRSAIYCLNRAPTRSHDGATPYEKSHGEKPKLDHLRAFGCTAYVTFQSQQRRKLDDKAWAGAFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDEED--FVTAASANPFSVLS---DDDDDESNGDSTIKARENREEDSGATTRVAKVEGTGNLTETVSKG---EPKFAAEALKGPKAGKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEEGSVARYKARLVAQGFSQVEGEYFFETSAPVARMSTLRAVFSLAAEH 281
            A + ++ WAEA+ +A+Y  NR+PT+S  G TP+E   GEKPK+DHLR FGCT Y      +R+KLD KA     LGY  ++  YR+YD +   + FSR+V F+E +  F     AN    ++   + D  E + + + + +  R E      R+ K         TV+     EPK   + L  P   KW+ AME+E  +L  N  W   +   LP  RKA+ ++W+FK K+  +G+  R+KARLVAQGFSQ  G  + ET +PV R  ++R + + A ++
Sbjct:   69 AKLPQKFWAEALSTAVYLRNRSPTKSVKGMTPFEAWTGEKPKVDHLRIFGCTVYAHVPKDERKKLDPKAKKCILLGYGTETKGYRLYDSKLAKVFFSRDVIFNESNHAFEKEPVANEDGAVNRYVEFDCQEPDNEESPEQKVQRSE------RLRKPPDYYGEWVTVASNPTTEPKTVKDVLSSPDKAKWKEAMEKEMESLYANNVWNLVE---LPKGRKAVGSKWVFKVKVDADGTFERHKARLVAQGFSQKFGSDYDETFSPVVRFESVRTIIAQAVQY 340          
BLAST of mRNA_H-paniculata_contig14013.2454.1 vs. uniprot
Match: A0A0V0VEL0_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Trichinella TaxID=6333 RepID=A0A0V0VEL0_9BILA)

HSP 1 Score: 166 bits (421), Expect = 1.320e-43
Identity = 111/299 (37.12%), Postives = 154/299 (51.51%), Query Frame = 0
Query:    4 AKMITANMGRRCWAEAVRSAIYCLNRAPTRSHDGATPYEKSHGEKPKLDHLRAFGCTAYVTFQSQQRRKLDDKAWAGAFLGYDNDSPSYRIYDPRTKSLQFSRNVRF-------------DEEDFVTAASANPFSVLSDDDDDESNGDSTIKARENREEDSGATTRVA----KVEGTGNLTET---VSKGEPKFAAEALKGPKAGKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEEGSVARYKARLVAQGFSQVEGEYFFETSAPVARMSTLRAVFSLAAEHD 282
            A + T N+ R  WAEAV +A Y LNR P R     TPYE+  G +P ++HLR FGC AYV    Q RRK D KA    F+GY   +  +R++D     +    +V+F             +E+ ++  A  +    L DD  D    D T K    R   S    +V     K+E     TE    ++  +P    EAL+G  A KW+ AM EE  AL  N TW   D   LPA RK +  +W+FK K+  +G V++YKARLVA+G+SQ     +FET APV R  ++R + ++AA+ D
Sbjct:   80 AMLHTRNLPRCLWAEAVHTAAYLLNRIPNRKEITKTPYEEWFGRRPTVEHLRIFGCDAYVHIPDQHRRKFDPKARKVIFVGYGPSNKMFRVFDTNKHRVDEVTDVQFNESLQKRLVLIDGEEDSWMQTADKDEDDFLEDDTTD----DKTEKRGPGRPPGSKNKIKVISNPLKMELRSKSTERTAMLAAADPLTEEEALEGANAEKWKEAMLEEISALHMNDTWILTD---LPADRKTIQCKWVFKSKINSDGEVSKYKARLVAKGYSQRAEIDYFETFAPVVRYESVRTLLAIAADED 371          
BLAST of mRNA_H-paniculata_contig14013.2454.1 vs. uniprot
Match: A0A8J5YMD5_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YMD5_9ROSI)

HSP 1 Score: 167 bits (424), Expect = 1.390e-43
Identity = 102/280 (36.43%), Postives = 153/280 (54.64%), Query Frame = 0
Query:    6 MITANMGRRCWAEAVRSAIYCLNRAPTRSHDGATPYEKSHGEKPKLDHLRAFGCTAYVTFQSQQRRKLDDKAWAGAFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDEEDFVTAASANPFSVLSDDDDDESNGDSTIKARENREEDSGATTRVAKVEGTGNLTETVSKG-----EPKFAAEALKGPKAGKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEEGSVARYKARLVAQGFSQVEGEYFFETSAPVARMSTLRAVFSLAAE 280
            +  A M    WAEAV +++Y LNR  T +  G TP+E   G+KP + HLR FGC  Y    +++R KL+ ++  G F+GY      YRI+DP TK +  SR+V+F+EE +      N  S+L +D +        I+A    + D       A + GT  L +   +      EP   A+A+K      W+ AME E   + +N TWE  +    P  RK +  +W+F+ K   +G + ++KARLV +G+SQ +G  FFET APVAR+ T+R +F+LAA+
Sbjct:  109 LFEAKMPNNFWAEAVNTSVYLLNRLSTNAVKGKTPFEAWFGQKPTVSHLRVFGCLCYALVPAEKRTKLEKRSMPGVFVGYSRVKKGYRIFDPLTKKIIVSRDVKFNEEGYWKWDGTNA-SLLEEDQNSPDLQPPEIEAEAEDDYDD------APIRGTRTLADIYERCAMTIVEPSCYAKAVKEEC---WQEAMEAELKMIQKNDTWELVN---RPENRKVIGVKWVFRTKTNSDGFLNKHKARLVVKGYSQQQGVDFFETFAPVARLDTIRFLFALAAQ 375          
BLAST of mRNA_H-paniculata_contig14013.2454.1 vs. uniprot
Match: A0A8J5YEG9_9ROSI (Integrase catalytic domain-containing protein n=6 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YEG9_9ROSI)

HSP 1 Score: 168 bits (426), Expect = 1.640e-43
Identity = 101/285 (35.44%), Postives = 158/285 (55.44%), Query Frame = 0
Query:    1 MTTAKMITANMGRRCWAEAVRSAIYCLNRAPTRSHDGATPYEKSHGEKPKLDHLRAFGCTAYVTFQSQQRRKLDDKAWAGAFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDEEDFVTAASANPFSVLSDDDDDESNGDSTIKARENREEDSGATTRVAKVEGTGNLTE-----TVSKGEPKFAAEALKGPKAGKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEEGSVARYKARLVAQGFSQVEGEYFFETSAPVARMSTLRAVFSLAAE 280
            MT   +  + +  R WAEAV +++Y LN+ PTR+    TP+E  +G KP + HL+ FGC  Y    +++R KL+ ++  G F+GY +    YR+YDP TK +  SR++RFDEE F +   +           DE   D +++  EN E +SG       V GT  + +      V+  EP    EA +      W+ AME E   + +N TW+  D    P ++K +  +W+F+ K   +GS+ ++KA+LV +G+SQ  G  F ET APVAR+ T++ +F+LAA+
Sbjct:  628 MTRCLLFQSKLPSRFWAEAVNTSVYLLNKLPTRAVKDKTPFEAWYGLKPSVSHLKVFGCMCYALIPAERRTKLERRSAPGIFVGYSSTKKGYRVYDPSTKKILVSRDIRFDEEKFWSWDESESSQF------DEDQLDISLEPAEN-ELESGDIDDPP-VRGTRTIADIYHRCNVAIVEPSCYEEAARNRN---WKKAMEAELEMIRKNETWDLVD---RPDQKKVIGVKWVFRAKFNSDGSLNKHKAKLVVKGYSQEYGTDFMETFAPVARLDTIKLLFALAAQ 898          
BLAST of mRNA_H-paniculata_contig14013.2454.1 vs. uniprot
Match: A0A8J6HJQ3_TENMO (Integrase catalytic domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HJQ3_TENMO)

HSP 1 Score: 167 bits (424), Expect = 2.550e-43
Identity = 114/305 (37.38%), Postives = 159/305 (52.13%), Query Frame = 0
Query:    2 TTAKMITANMGRRCWAEAVRSAIYCLNRAPTRSHDGATPYEKSHGEKPKLDHLRAFGCTAYVTFQSQQRRKLDDKAWAGAFLGYDNDSPSYRIYDPRTKSLQFSRNVRFDEEDFVTAASANPFSVLS-------DDDDDESNGDSTIKARE------NREEDSGA---TTRVAKVEGTGN--------LTETVSKGEPKFAAEALKGPKAGKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEEGSVARYKARLVAQGFSQVEGEYFFETSAPVARMSTLRAVFSLAAEHD 282
            T   ++ A + +  WAEAV +A+Y +NR PTR  +  TP E   G KP + HL+ FGC A V      R K D       F+GY  +S  YR YDP+T+ +  SR+  F E  F+     N  +V +       DD+DDE    ++  AR       N EE       TTR  K +   +        +T      +P+   EAL  P++  W++AMEEE+ AL+ENGTW   DP    A  K L  RW+FK K + +     YKARLVA+G +Q+ G +F ET +PV RM TLR + S+AA++D
Sbjct:  219 TNRTIVDAGLPKAYWAEAVSTAVYLINRTPTRILNFKTPEEVWTGRKPDISHLKIFGCKAMVYVLKPLRLKWDSPTRDAIFIGYPEESKGYRFYDPQTRKVFKSRDAVFMETAFLAQLKRNETNVATFELAVPTDDEDDEEPQTASPTARTKIPETINEEEPQNMLRKTTRKPKPKKDDDYIYYKINAITHENEDEDPQTPEEALNSPQSHLWKSAMEEEYKALMENGTWTLTDP---KANAKVLKIRWVFKTK-RGKDQPTLYKARLVAKGCTQIPGIHFEETYSPVIRMETLRFLISMAAKYD 519          
BLAST of mRNA_H-paniculata_contig14013.2454.1 vs. uniprot
Match: A0A0V0W314_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trichinella sp. T6 TaxID=92179 RepID=A0A0V0W314_9BILA)

HSP 1 Score: 166 bits (421), Expect = 7.410e-43
Identity = 111/299 (37.12%), Postives = 154/299 (51.51%), Query Frame = 0
Query:    4 AKMITANMGRRCWAEAVRSAIYCLNRAPTRSHDGATPYEKSHGEKPKLDHLRAFGCTAYVTFQSQQRRKLDDKAWAGAFLGYDNDSPSYRIYDPRTKSLQFSRNVRF-------------DEEDFVTAASANPFSVLSDDDDDESNGDSTIKARENREEDSGATTRVA----KVEGTGNLTETVSK---GEPKFAAEALKGPKAGKWRAAMEEEWGALVENGTWESEDPGRLPARRKALLTRWIFKRKLKEEGSVARYKARLVAQGFSQVEGEYFFETSAPVARMSTLRAVFSLAAEHD 282
            A + T N+ R  WAEAV +A Y LNR P R     TPYE+  G +P ++HLR FGC AYV    Q RRK D KA    F+GY   +  +R++D     +    +V+F             +E+ ++  A  +    L DD  D    D T K    R   S    +V     K+E     TE ++     +P    EAL+G  A KW+ AM EE  AL  N TW   D   LPA RK +  +W+FK K+  +G V++YKARLVA+G+SQ     +FET APV R  ++R + ++AA+ D
Sbjct:  546 AMLHTRNLPRCLWAEAVHTAAYLLNRIPNRKEITKTPYEEWFGRRPTVEHLRIFGCDAYVHIPDQHRRKFDPKARKVIFVGYGPSNKMFRVFDTNKHRVDEVTDVQFNESLQKRLVLIDGEEDSWMQTADKDEDDFLEDDITD----DKTEKRGPGRPPGSKNKIKVISNPLKMELRSKSTERIAMLAAADPLTEEEALEGANAEKWKEAMLEEISALHMNDTWILTD---LPADRKTIQCKWVFKSKINSDGEVSKYKARLVAKGYSQRAEIDYFETFAPVVRYESVRTLLAIAADED 837          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14013.2454.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J6CTJ0_9ROSI2.140e-4536.84Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J5YXK5_9ROSI4.220e-4536.84Uncharacterized protein n=1 Tax=Gossypium anomalum... [more]
A0A085N6C0_9BILA1.550e-4435.93Uncharacterized protein n=1 Tax=Trichuris suis Tax... [more]
UPI001F0044648.020e-4435.29DDE-type integrase/transposase/recombinase n=1 Tax... [more]
A0A498M2F0_LABRO9.580e-4437.01Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A0V0VEL0_9BILA1.320e-4337.12Retrovirus-related Pol polyprotein from transposon... [more]
A0A8J5YMD5_9ROSI1.390e-4336.43Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J5YEG9_9ROSI1.640e-4335.44Integrase catalytic domain-containing protein n=6 ... [more]
A0A8J6HJQ3_TENMO2.550e-4337.38Integrase catalytic domain-containing protein n=1 ... [more]
A0A0V0W314_9BILA7.410e-4337.12Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 215..282
e-value: 5.7E-16
score: 58.9
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 9..281
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 9..281

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14013contigH-paniculata_contig14013:879..2046 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14013.2454.1mRNA_H-paniculata_contig14013.2454.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14013 879..2463 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14013.2454.1 ID=prot_H-paniculata_contig14013.2454.1|Name=mRNA_H-paniculata_contig14013.2454.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=285bp
MTTAKMITANMGRRCWAEAVRSAIYCLNRAPTRSHDGATPYEKSHGEKPK
LDHLRAFGCTAYVTFQSQQRRKLDDKAWAGAFLGYDNDSPSYRIYDPRTK
SLQFSRNVRFDEEDFVTAASANPFSVLSDDDDDESNGDSTIKARENREED
SGATTRVAKVEGTGNLTETVSKGEPKFAAEALKGPKAGKWRAAMEEEWGA
LVENGTWESEDPGRLPARRKALLTRWIFKRKLKEEGSVARYKARLVAQGF
SQVEGEYFFETSAPVARMSTLRAVFSLAAEHDSN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like