mRNA_H-paniculata_contig13997.2434.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13997.2434.1 vs. uniprot
Match: D7FU15_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU15_ECTSI) HSP 1 Score: 161 bits (408), Expect = 2.120e-47 Identity = 84/107 (78.50%), Postives = 93/107 (86.92%), Query Frame = 1 Query: 1 LAIFFQDYMERNLAPVDYDDRWGTLSRSAKKSVAAGVAGAALTNPLDVLRNEMFKTDLSVGRALAKLRQEEGARFMVRGMNKNLVAVAIPIAVTIFMTDFLVRMVEN 321 +A+ +DYMERNLAP D+ DRWGTL RSA+KSVAAGVAGAALTNPLDVLRNEMFKTDL V ALAKLR+EEG+ F VRGM+KNLVAVAIPI VTIF+TD LVR VE Sbjct: 167 VAVSVKDYMERNLAPADHGDRWGTLWRSAQKSVAAGVAGAALTNPLDVLRNEMFKTDLGVRDALAKLRREEGSGFAVRGMSKNLVAVAIPITVTIFVTDVLVRAVEE 273
BLAST of mRNA_H-paniculata_contig13997.2434.1 vs. uniprot
Match: A0A835YRL8_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRL8_9STRA) HSP 1 Score: 125 bits (314), Expect = 4.410e-33 Identity = 68/104 (65.38%), Postives = 81/104 (77.88%), Query Frame = 1 Query: 1 LAIFFQDYMERNLAPVDYD-DRWGTLSRSAKKSVAAGVAGAALTNPLDVLRNEMFKTDLSVGRALAKLRQEEGARFMVRGMNKNLVAVAIPIAVTIFMTDFLVR 309 +A+ +DYME L P + + WG RSAKKSVAAGVAGAALTNP+DVLRNEMFKTDL V +AL+KL EEGA++ RGM KNLVAV+IPI +TIF TD L+R Sbjct: 174 VAVAVKDYMEGVLDPPNPELGSWGAAWRSAKKSVAAGVAGAALTNPVDVLRNEMFKTDLGVRQALSKLIHEEGAQWATRGMTKNLVAVSIPIGLTIFFTDVLIR 277
BLAST of mRNA_H-paniculata_contig13997.2434.1 vs. uniprot
Match: A0A7S2MG35_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MG35_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.530e-31 Identity = 63/103 (61.17%), Postives = 73/103 (70.87%), Query Frame = 1 Query: 4 AIFFQDYMERNLAPVDYDDRWGTLSRSAKKSVAAGVAGAALTNPLDVLRNEMFKTDLSVGRALAKLRQEEGARFMVRGMNKNLVAVAIPIAVTIFMTDFLVRM 312 AI +DY+E L D R TL RSA KS+ AGVAGAALTNP DVLRNEMFKTDL V L L Q+EG FM+RG+ KNL+AVA+PI VTIF TD V++ Sbjct: 50 AIVVKDYLEAKLPLWDDMTRNETLLRSAAKSIVAGVAGAALTNPFDVLRNEMFKTDLGVSATLRSLHQQEGFAFMLRGVEKNLIAVAVPITVTIFFTDLFVKL 152
BLAST of mRNA_H-paniculata_contig13997.2434.1 vs. uniprot
Match: A9VDC5_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VDC5_MONBE) HSP 1 Score: 109 bits (272), Expect = 1.040e-27 Identity = 57/99 (57.58%), Postives = 74/99 (74.75%), Query Frame = 1 Query: 4 AIFFQDYMERNLAPVDYD-DRWGTLSRSAKKSVAAGVAGAALTNPLDVLRNEMFKTDLSVGRALAKLRQEEGARFMVRGMNKNLVAVAIPIAVTIFMTD 297 A+ + M+R+LAPV+ + DR G L RSAKK+V AG AGA LTNP DV+RN MF+TDL + A+ L Q EG RF+ RG+ KN++AVAIP+ VTIF+TD Sbjct: 99 AVLVKQAMDRSLAPVNKEQDRLGWLVRSAKKAVVAGTAGAILTNPFDVIRNHMFRTDLGMVPAIRSLYQTEGPRFVWRGVAKNMIAVAIPVTVTIFLTD 197
BLAST of mRNA_H-paniculata_contig13997.2434.1 vs. uniprot
Match: F2U662_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U662_SALR5) HSP 1 Score: 109 bits (272), Expect = 4.610e-27 Identity = 54/102 (52.94%), Postives = 76/102 (74.51%), Query Frame = 1 Query: 4 AIFFQDYMERNLAPVDYDDRWGTLSRSAKKSVAAGVAGAALTNPLDVLRNEMFKTDLSVGRALAKLRQEEGARFMVRGMNKNLVAVAIPIAVTIFMTDFLVR 309 A++ ++ M+ LAPVD DR L RSAKKSV AG+AGA LTNPLDV+RN MF+T+ S+ + + L ++G RF+ +G+ KNLVAVA+P+++TIF+TD R Sbjct: 164 AVYVKEMMDEWLAPVDSTDRTAVLVRSAKKSVIAGLAGATLTNPLDVIRNTMFQTETSMFQTIKHLHAKKGWRFLYQGLGKNLVAVAVPVSLTIFLTDAFSR 265
BLAST of mRNA_H-paniculata_contig13997.2434.1 vs. uniprot
Match: A0A6U9R120_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A6U9R120_9DINO) HSP 1 Score: 108 bits (269), Expect = 1.430e-26 Identity = 56/99 (56.57%), Postives = 74/99 (74.75%), Query Frame = 1 Query: 1 LAIFFQDYMERNLAPVDYDDRWGTLSRSAKKSVAAGVAGAALTNPLDVLRNEMFKTDLSVGRALAKLRQEEGARFMVRGMNKNLVAVAIPIAVTIFMTD 297 +A+ +DYM + LAPVD D+ L +SAK +V+AGVAGA LTNPLDV+RNEMFKT+ + +A++ E GA ++ RG+NKN VAVA PIA TIF+TD Sbjct: 167 VAVLIKDYMGQWLAPVDPADKSAVLMKSAKVAVSAGVAGAVLTNPLDVVRNEMFKTEEKMLPCMARMTSETGAAWLFRGINKNWVAVAAPIASTIFLTD 265
BLAST of mRNA_H-paniculata_contig13997.2434.1 vs. uniprot
Match: A0A7S0KAL9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KAL9_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.170e-25 Identity = 58/105 (55.24%), Postives = 74/105 (70.48%), Query Frame = 1 Query: 4 AIFFQDYMERNLAPVDYDD---RWGTLSRSAKKSVAAGVAGAALTNPLDVLRNEMFKTDLSVGRALAKLRQEEGARFMVRGMNKNLVAVAIPIAVTIFMTDFLVR 309 A+F +DYME NL VD + +L RSA KSV AGVAGAALTNPLDV+RNEMFKT+ ++ + L ++ G + RGM KNLVAV+IP+A TIF TD L++ Sbjct: 177 AVFVKDYMEMNLPEVDPSSPTYKSDSLIRSATKSVIAGVAGAALTNPLDVIRNEMFKTNQNLKETVVGLHKKGGWQVFARGMGKNLVAVSIPVASTIFFTDMLIQ 281
BLAST of mRNA_H-paniculata_contig13997.2434.1 vs. uniprot
Match: A0A7S3F2X1_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F2X1_9EUKA) HSP 1 Score: 101 bits (251), Expect = 1.300e-25 Identity = 53/79 (67.09%), Postives = 64/79 (81.01%), Query Frame = 1 Query: 73 LSRSAKKSVAAGVAGAALTNPLDVLRNEMFKTDLSVGRALAKLRQEEGARFMVRGMNKNLVAVAIPIAVTIFMTDFLVR 309 LSRSA KSVAAGVAGAALTNPLDV+RNEMFKT+ +V + +L + EGA FM RGM +NL+AVA PI +TIF+TD +V Sbjct: 28 LSRSAAKSVAAGVAGAALTNPLDVVRNEMFKTEEAVAPTVRRLWKLEGAGFMFRGMQRNLIAVAAPIGMTIFLTDTIVE 106
BLAST of mRNA_H-paniculata_contig13997.2434.1 vs. uniprot
Match: A0A7S2G6Q8_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2G6Q8_9DINO) HSP 1 Score: 105 bits (261), Expect = 1.430e-25 Identity = 54/98 (55.10%), Postives = 70/98 (71.43%), Query Frame = 1 Query: 4 AIFFQDYMERNLAPVDYDDRWGTLSRSAKKSVAAGVAGAALTNPLDVLRNEMFKTDLSVGRALAKLRQEEGARFMVRGMNKNLVAVAIPIAVTIFMTD 297 AI +D MER L PVD RSAKKS+AAGV GA LTNPLDVL+N+MFKT+ S + +L +EEG R++ RG+ KN++A A+PIA T+F+TD Sbjct: 142 AIVAKDAMERLLEPVDGQSAGSQAVRSAKKSMAAGVVGAVLTNPLDVLQNQMFKTEESAAASFRRLCREEGCRWLARGIEKNVIASAVPIAATMFLTD 239
BLAST of mRNA_H-paniculata_contig13997.2434.1 vs. uniprot
Match: A0A7S2C8L2_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2C8L2_9EUKA) HSP 1 Score: 104 bits (259), Expect = 4.950e-25 Identity = 57/107 (53.27%), Postives = 75/107 (70.09%), Query Frame = 1 Query: 4 AIFFQDYMERNLAPVDY-----DDRWGTLSRSAKKSVAAGVAGAALTNPLDVLRNEMFKTDLSVGRALAKLRQEEGARFMVRGMNKNLVAVAIPIAVTIFMTDFLVR 309 AI+ +D++ L P D + R TL+RSA KS+AAGVAGAALTNPLDV+RNEMFK + G+ + +L + EG F +RGM +NLVAVA PI +TIF+TD L+ Sbjct: 164 AIWVKDWVASKLPPPDAPKGTPEHRLQTLNRSAAKSIAAGVAGAALTNPLDVIRNEMFKFEEGFGQTVTRLLRSEGWAFCMRGMQRNLVAVAAPIGMTIFLTDALLE 270 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13997.2434.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13997.2434.1 >prot_H-paniculata_contig13997.2434.1 ID=prot_H-paniculata_contig13997.2434.1|Name=mRNA_H-paniculata_contig13997.2434.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=100bp MERNLAPVDYDDRWGTLSRSAKKSVAAGVAGAALTNPLDVLRNEMFKTDLback to top mRNA from alignment at H-paniculata_contig13997:235..558+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13997.2434.1 ID=mRNA_H-paniculata_contig13997.2434.1|Name=mRNA_H-paniculata_contig13997.2434.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=324bp|location=Sequence derived from alignment at H-paniculata_contig13997:235..558+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13997:235..558+ >mRNA_H-paniculata_contig13997.2434.1 ID=mRNA_H-paniculata_contig13997.2434.1|Name=mRNA_H-paniculata_contig13997.2434.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=600bp|location=Sequence derived from alignment at H-paniculata_contig13997:235..558+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |