mRNA_H-paniculata_contig13995.2433.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13995.2433.1 vs. uniprot
Match: A5AJZ9_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5AJZ9_VITVI) HSP 1 Score: 65.5 bits (158), Expect = 1.280e-10 Identity = 23/67 (34.33%), Postives = 48/67 (71.64%), Query Frame = 1 Query: 1 ELGWKNFHSVRIFCDNKGALLLAGQDNYGSRSKHLVIRFAGLRDWINQRQIIIDHVSTKNQLSDILT 201 ++ W++ S+RI+CDN + +A + Y S++KH+ I++ +R+ + ++ ++I+HVSTK+ + D+LT Sbjct: 388 DVSWRSAKSLRIYCDNSTTVFMAKNNKYSSQNKHIDIKYLAIRECVKEKTVVIEHVSTKSIIYDLLT 454
BLAST of mRNA_H-paniculata_contig13995.2433.1 vs. uniprot
Match: A0A0J7K7M6_LASNI (Retrovirus-related gag-pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K7M6_LASNI) HSP 1 Score: 62.8 bits (151), Expect = 1.200e-9 Identity = 32/73 (43.84%), Postives = 43/73 (58.90%), Query Frame = 1 Query: 1 ELGWKNFHSVRIFCDNKGALLLAGQDNYGSRSKHLVIRFAGLRDWINQRQIIIDHVSTKNQLSDILTNFCSRP 219 ELG+ N IF DN GA LA Y SRSKH+ +R +R+ +N I ++HVST + +SDI+T RP Sbjct: 1277 ELGFDNLTDTTIFNDNLGAKKLAENPGYHSRSKHIDVRHHFIREALNNELIKVEHVSTNDMISDIMTKGLPRP 1349
BLAST of mRNA_H-paniculata_contig13995.2433.1 vs. uniprot
Match: A0A371GPV0_MUCPR (Copia protein (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371GPV0_MUCPR) HSP 1 Score: 58.5 bits (140), Expect = 4.360e-9 Identity = 23/56 (41.07%), Postives = 40/56 (71.43%), Query Frame = 1 Query: 34 IFCDNKGALLLAGQDNYGSRSKHLVIRFAGLRDWINQRQIIIDHVSTKNQLSDILT 201 IFCDNK A+ L+ + RSKH+ IRF +R+W+ +++++I++ T+ Q++DI T Sbjct: 53 IFCDNKSAIALSKNPVFHGRSKHIDIRFHKIREWVVEKEVVIEYCPTEEQVADIFT 108
BLAST of mRNA_H-paniculata_contig13995.2433.1 vs. uniprot
Match: A0A2I0XJ16_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0XJ16_9ASPA) HSP 1 Score: 59.3 bits (142), Expect = 6.440e-9 Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 1 Query: 1 ELGWKNFHSVRIFCDNKGALLLAGQDNYGSRSKHLVIRFAGLRDWINQRQIIIDHVSTKNQLSDILTNFCSRPTFSTL 234 E G + I+CDN A+ LA + +R+KH+ I + + + I Q I +DH+ST +Q++DILT S FSTL Sbjct: 104 EFGISSTGPTTIYCDNTSAIALAHNPVFHARTKHIEIDYHFISEHIKQGAIRVDHISTNDQIADILTKSLSTTQFSTL 181
BLAST of mRNA_H-paniculata_contig13995.2433.1 vs. uniprot
Match: A0A6A3R380_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3R380_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 1.220e-8 Identity = 28/79 (35.44%), Postives = 48/79 (60.76%), Query Frame = 1 Query: 1 ELGWKNFHSVRIFCDNKGALLLAGQDNYGSRSKHLVIRFAGLRDWINQRQIIIDHVSTKNQLSDILTNFCSRPTFSTLL 237 ++G + + I+ DNKGA+ LA Y SR+KH+ IR+ +R+ + ++ +++V TKNQL+D +T S T L+ Sbjct: 7 DIGAEQVGATVIYEDNKGAMALAKDVGYQSRTKHIDIRYHFIREKVVSNEVELEYVDTKNQLADFMTKGISLKTLRYLM 85
BLAST of mRNA_H-paniculata_contig13995.2433.1 vs. uniprot
Match: UPI0009010679 (uncharacterized protein LOC109150298 n=2 Tax=Ipomoea nil TaxID=35883 RepID=UPI0009010679) HSP 1 Score: 58.5 bits (140), Expect = 3.090e-8 Identity = 30/76 (39.47%), Postives = 45/76 (59.21%), Query Frame = 1 Query: 1 ELGWKNFHSVRIFCDNKGALLLAGQDNYGSRSKHLVIRFAGLRDWINQRQIIIDHVSTKNQLSDILTNFCSRPTFS 228 ELG + ++CDN GA L + +R+KH+ I F +RD + R+ I++ VSTK+QL+DILT P F+ Sbjct: 220 ELGLHSGDPATLWCDNLGATYLCANPVFHARTKHVEIDFHFVRDKVASREFIVNFVSTKDQLADILTKPLPGPRFA 295
BLAST of mRNA_H-paniculata_contig13995.2433.1 vs. uniprot
Match: UPI0006A6DC46 (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A6DC46) HSP 1 Score: 58.5 bits (140), Expect = 3.440e-8 Identity = 31/79 (39.24%), Postives = 46/79 (58.23%), Query Frame = 1 Query: 1 ELGWKNFHSVRIFCDNKGALLLAGQDNYGSRSKHLVIRFAGLRDWINQRQIIIDHVSTKNQLSDILTNFCSRPTFSTLL 237 ELG K+ + I+ DN G LA + SR KHL + + ++ +I Q+ + HVST +QL+D+LT RP F TL+ Sbjct: 260 ELGIKSPTTPVIYFDNIGETYLAANPVFHSRMKHLALDYHFVKQYIQAGQLRVSHVSTHDQLADVLTKPLPRPAFETLM 338
BLAST of mRNA_H-paniculata_contig13995.2433.1 vs. uniprot
Match: A0A371ERG2_MUCPR (Copia protein (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371ERG2_MUCPR) HSP 1 Score: 55.8 bits (133), Expect = 4.130e-8 Identity = 22/56 (39.29%), Postives = 39/56 (69.64%), Query Frame = 1 Query: 34 IFCDNKGALLLAGQDNYGSRSKHLVIRFAGLRDWINQRQIIIDHVSTKNQLSDILT 201 IFCDNK A+ L+ + RSKH+ IRF +R+W+ +++++I++ K Q+++I T Sbjct: 2 IFCDNKSAIALSKNPVFHGRSKHIDIRFHKIREWVVEKEVVIEYCPIKEQVTNIFT 57
BLAST of mRNA_H-paniculata_contig13995.2433.1 vs. uniprot
Match: A0A4Q3EC79_9SPHI (Transposon Pol polyprotein (Fragment) n=1 Tax=Sphingobacteriaceae bacterium TaxID=2021370 RepID=A0A4Q3EC79_9SPHI) HSP 1 Score: 58.2 bits (139), Expect = 4.850e-8 Identity = 26/62 (41.94%), Postives = 43/62 (69.35%), Query Frame = 1 Query: 31 RIFCDNKGALLLAGQDNYGSRSKHLVIRFAGLRDWINQRQIIIDHVSTKNQLSDILTNFCSR 216 +I+CDNKGA+ LA +N+ ++KH+ I+F + D I ++++ HVST+ L+D+LT SR Sbjct: 380 QIYCDNKGAIDLARNNNHSEQTKHVDIKFKLVHDEIVNNRMLLTHVSTEKMLADVLTKSLSR 441
BLAST of mRNA_H-paniculata_contig13995.2433.1 vs. uniprot
Match: A0A540MKD8_MALBA (Uncharacterized protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540MKD8_MALBA) HSP 1 Score: 57.4 bits (137), Expect = 7.010e-8 Identity = 30/78 (38.46%), Postives = 43/78 (55.13%), Query Frame = 1 Query: 1 ELGWKNFHSVRIFCDNKGALLLAGQDNYGSRSKHLVIRFAGLRDWINQRQIIIDHVSTKNQLSDILTNFCSRPTFSTL 234 ELG + I CDN GA + SR KH+ + F +RD +N+ + + HVST++QL+D+LT RP F L Sbjct: 163 ELGVSSMDKPTISCDNIGATFYSVNPVLHSRMKHIELDFQFVRDRVNRGLLQVSHVSTQDQLADVLTKALPRPRFQLL 240 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13995.2433.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13995.2433.1 >prot_H-paniculata_contig13995.2433.1 ID=prot_H-paniculata_contig13995.2433.1|Name=mRNA_H-paniculata_contig13995.2433.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=80bp ELGWKNFHSVRIFCDNKGALLLAGQDNYGSRSKHLVIRFAGLRDWINQRQback to top mRNA from alignment at H-paniculata_contig13995:6485..6724- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13995.2433.1 ID=mRNA_H-paniculata_contig13995.2433.1|Name=mRNA_H-paniculata_contig13995.2433.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=240bp|location=Sequence derived from alignment at H-paniculata_contig13995:6485..6724- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13995:6485..6724- >mRNA_H-paniculata_contig13995.2433.1 ID=mRNA_H-paniculata_contig13995.2433.1|Name=mRNA_H-paniculata_contig13995.2433.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=480bp|location=Sequence derived from alignment at H-paniculata_contig13995:6485..6724- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |