mRNA_H-paniculata_contig13974.2423.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig13974.2423.1 vs. uniprot
Match: D8LJI4_ECTSI (CAP-Gly domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJI4_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 9.530e-21 Identity = 38/63 (60.32%), Postives = 51/63 (80.95%), Query Frame = 1
Query: 1 RRTGSVRFVGETRFASGIWIGVELSPEMEPTGIHDGTVKGVCYFKCPPARGIFLRPDMVEYLE 189
+R VR+VGET+FA+G+W+GVELSP+ +P G +DG+V+GV YFKCPP G+F +PDM E LE
Sbjct: 390 KRAAVVRYVGETQFATGVWVGVELSPDADPPGNNDGSVRGVSYFKCPPLCGVFAKPDMFELLE 452
BLAST of mRNA_H-paniculata_contig13974.2423.1 vs. uniprot
Match: A0A6H5KBA3_9PHAE (CAP-Gly domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBA3_9PHAE) HSP 1 Score: 92.4 bits (228), Expect = 3.310e-20 Identity = 38/63 (60.32%), Postives = 50/63 (79.37%), Query Frame = 1
Query: 1 RRTGSVRFVGETRFASGIWIGVELSPEMEPTGIHDGTVKGVCYFKCPPARGIFLRPDMVEYLE 189
+R VR+VGET+FA+G+W+GVELSP +P G +DG+V+GV YFKCPP G+F +PDM E LE
Sbjct: 378 KRAAVVRYVGETQFATGVWVGVELSPGADPPGNNDGSVRGVSYFKCPPLCGVFAKPDMFELLE 440
BLAST of mRNA_H-paniculata_contig13974.2423.1 vs. uniprot
Match: A0A7S3UUX6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUX6_HETAK) HSP 1 Score: 78.6 bits (192), Expect = 2.010e-16 Identity = 35/57 (61.40%), Postives = 44/57 (77.19%), Query Frame = 1
Query: 10 GSVRFVGETRFASGIWIGVELSPEMEPTGIHDGTVKGVCYFKCPPARGIFLRPDMVE 180
G+VRF+GET+FA G+WIGVEL+ + G HDGTVKGV YF CP +G+F+RPD V
Sbjct: 113 GTVRFIGETKFAQGVWIGVELTVKK---GKHDGTVKGVRYFLCPQNQGVFVRPDSVR 166
BLAST of mRNA_H-paniculata_contig13974.2423.1 vs. uniprot
Match: A0A8J4TC35_CLAMG (CAP-Gly domain-containing linker protein 4 isoform X2 (Fragment) n=1 Tax=Clarias magur TaxID=1594786 RepID=A0A8J4TC35_CLAMG) HSP 1 Score: 77.0 bits (188), Expect = 2.850e-16 Identity = 34/65 (52.31%), Postives = 46/65 (70.77%), Query Frame = 1
Query: 1 RRTGSVRFVGETRFASGIWIGVELSPEMEPTGIHDGTVKGVCYFKCPPARGIFLRPDMVEYLEGN 195
+RTG VRF G+TRFA GIW+G+EL +P+G +DG+V GV YF CPP G+F P V+ + G+
Sbjct: 41 QRTGVVRFYGKTRFAPGIWLGIELD---KPSGKNDGSVGGVKYFSCPPKHGVFAPPSRVQRIHGS 102
BLAST of mRNA_H-paniculata_contig13974.2423.1 vs. uniprot
Match: A0A1Y2B0I4_9FUNG (CAP-Gly domain-containing protein n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2B0I4_9FUNG) HSP 1 Score: 75.5 bits (184), Expect = 1.110e-15 Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 1
Query: 10 GSVRFVGETRFASGIWIGVELSPEMEPTGIHDGTVKGVCYFKCPPARGIFLRPDMVEYLEGNGGGD 207
G+VR++GET+F +GIW+GVEL + G ++GTV GV YFKCPP GIF+ VE L G+ G D
Sbjct: 67 GTVRYIGETKFKTGIWVGVEL--DKRGVGKNNGTVMGVTYFKCPPLTGIFIPVTAVEKLSGDQGND 130
BLAST of mRNA_H-paniculata_contig13974.2423.1 vs. uniprot
Match: C3YMN8_BRAFL (CAP-Gly domain-containing protein (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YMN8_BRAFL) HSP 1 Score: 72.4 bits (176), Expect = 2.410e-15 Identity = 35/56 (62.50%), Postives = 41/56 (73.21%), Query Frame = 1
Query: 10 GSVRFVGETRFASGIWIGVELSPEMEPTGIHDGTVKGVCYFKCPPARGIFLRPDMV 177
G V+FVGET FASG W+G+EL + TG +DG VKGV YFKC P GIF+RPD V
Sbjct: 12 GVVKFVGETEFASGPWVGIELDLD---TGKNDGEVKGVRYFKCRPNYGIFVRPDKV 64
BLAST of mRNA_H-paniculata_contig13974.2423.1 vs. uniprot
Match: A0A3B3QMQ8_9TELE (Si:dkeyp-47f9.4 n=4 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3QMQ8_9TELE) HSP 1 Score: 77.8 bits (190), Expect = 4.560e-15 Identity = 34/65 (52.31%), Postives = 44/65 (67.69%), Query Frame = 1
Query: 1 RRTGSVRFVGETRFASGIWIGVELSPEMEPTGIHDGTVKGVCYFKCPPARGIFLRPDMVEYLEGN 195
+RTG VRF G T FA G W+G+EL +P+G +DG+V GVCYF CPP GIF P V+ + G+
Sbjct: 408 QRTGVVRFSGNTNFAPGFWVGIELD---KPSGKNDGSVGGVCYFTCPPKHGIFAPPSRVQRIHGS 469
BLAST of mRNA_H-paniculata_contig13974.2423.1 vs. uniprot
Match: A0A165N0P1_EXIGL (Tubulin-folding cofactor B n=1 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165N0P1_EXIGL) HSP 1 Score: 75.1 bits (183), Expect = 9.430e-15 Identity = 35/63 (55.56%), Postives = 44/63 (69.84%), Query Frame = 1
Query: 1 RRTGSVRFVGETRFASGIWIGVELSPEMEPTGIHDGTVKGVCYFKCPPARGIFLRPDMVEYLE 189
R+ G+VRFVGETRFA G+W+GVE EP G +DG+V+G YF C P+ G F+RPD V E
Sbjct: 162 RKRGTVRFVGETRFAKGLWVGVEYD---EPLGKNDGSVEGEGYFTCRPSYGAFVRPDRVSIGE 221
BLAST of mRNA_H-paniculata_contig13974.2423.1 vs. uniprot
Match: M2QPV1_CERS8 (Uncharacterized protein n=1 Tax=Ceriporiopsis subvermispora (strain B) TaxID=914234 RepID=M2QPV1_CERS8) HSP 1 Score: 74.7 bits (182), Expect = 1.260e-14 Identity = 30/59 (50.85%), Postives = 44/59 (74.58%), Query Frame = 1
Query: 4 RTGSVRFVGETRFASGIWIGVELSPEMEPTGIHDGTVKGVCYFKCPPARGIFLRPDMVE 180
+ G+VRFVG T+FA G+W+G+E EP G +DG+V+G YF CPP+ G+F++PD V+
Sbjct: 163 KRGTVRFVGPTKFAKGVWVGIEFD---EPIGKNDGSVQGEQYFTCPPSHGVFVKPDRVK 218
BLAST of mRNA_H-paniculata_contig13974.2423.1 vs. uniprot
Match: A0A8J4TDN8_CLAMG (CAP-Gly domain-containing linker protein 4 isoform X2 (Fragment) n=1 Tax=Clarias magur TaxID=1594786 RepID=A0A8J4TDN8_CLAMG) HSP 1 Score: 74.3 bits (181), Expect = 4.380e-14 Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = 1
Query: 1 RRTGSVRFVGETRFASGIWIGVELSPEMEPTGIHDGTVKGVCYFKCPPARGIFLRPDMVE 180
+RTG VRF G+TRFA GIW+G+EL +P+G +DG+V GV YF CPP G+F P V+
Sbjct: 258 QRTGVVRFYGKTRFAPGIWLGIELD---KPSGKNDGSVGGVKYFSCPPKHGVFAPPSRVQ 314 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13974.2423.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13974.2423.1 >prot_H-paniculata_contig13974.2423.1 ID=prot_H-paniculata_contig13974.2423.1|Name=mRNA_H-paniculata_contig13974.2423.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=73bp RRTGSVRFVGETRFASGIWIGVELSPEMEPTGIHDGTVKGVCYFKCPPARback to top mRNA from alignment at H-paniculata_contig13974:313..531- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13974.2423.1 ID=mRNA_H-paniculata_contig13974.2423.1|Name=mRNA_H-paniculata_contig13974.2423.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=219bp|location=Sequence derived from alignment at H-paniculata_contig13974:313..531- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13974:313..531- >mRNA_H-paniculata_contig13974.2423.1 ID=mRNA_H-paniculata_contig13974.2423.1|Name=mRNA_H-paniculata_contig13974.2423.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=438bp|location=Sequence derived from alignment at H-paniculata_contig13974:313..531- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |