mRNA_H-paniculata_contig1390.2390.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1390.2390.1 vs. uniprot
Match: D8LLU5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLU5_ECTSI) HSP 1 Score: 189 bits (481), Expect = 6.660e-59 Identity = 95/159 (59.75%), Postives = 118/159 (74.21%), Query Frame = 1 Query: 7 TDTYCQAVAVLLCPCSFLPLIPGVMGKKRLLLEEEEAVLTSDCSWGC--HEVSRMPYGELGNVREARVCCCVGFSSNLTP--GDGGLGKTIIPGNCCETALVAEIVRNLKARMKDRGDTGQIQRAEENVRQIQHLHAKIDALMERLQVAAVPMPIAIDR 471 TDTYCQ ++ CP ++ + PGV+GKK L+LEEEEA+LT DC C H V+ PYGELG+V VCC VGF+SNL+P +GG IIPGNCCETALV EIV LK RMK RGDTGQI+RAEEN+++I+HLHAKIDA+ME L + AV P+ ++R Sbjct: 17 TDTYCQCCLIITCPLTWAAICPGVLGKKILVLEEEEAILTQDC---CIYHSVAHRPYGELGSVERENVCCFVGFTSNLSPTKSEGGGQAAIIPGNCCETALVNEIVEELKKRMKHRGDTGQIKRAEENLKEIRHLHAKIDAVMEHLNIPAVQAPMEMNR 172
BLAST of mRNA_H-paniculata_contig1390.2390.1 vs. uniprot
Match: A0A7S3F1E5_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F1E5_9EUKA) HSP 1 Score: 100 bits (249), Expect = 9.640e-24 Identity = 67/142 (47.18%), Postives = 88/142 (61.97%), Query Frame = 1 Query: 76 VMGKKRLLLEEEEAV--LTSDCSWGCHEVSRMPYGELGNVREARVC-CCVGFSSNLTPGDGGLGKTIIPGNCCETALVAEIVRNLKARMKDRGDTGQIQRAEEN---VRQIQH----LHAKIDALMERLQVAAVPMPIAIDR 471 V+ + L LE EE V ++S C +V RMPYG+LG+V +A C CC+ SNLTP G +TI PG CETALV EIV LKARMK RGDTG I+RAE+ V ++Q+ L AK+DA++ L + P P ++R Sbjct: 45 VLCPQTLDLEPEEVVYKISSPCDT---KVKRMPYGQLGSVDKATACGCCIAVDSNLTP---GAEETIAPGCGCETALVEEIVAELKARMKARGDTGNIKRAEQTLEIVAKVQNDVADLTAKVDAILAHLNI---PAPAKMER 177
BLAST of mRNA_H-paniculata_contig1390.2390.1 vs. uniprot
Match: R1BM26_EMIHU (Uncharacterized protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BM26_EMIHU) HSP 1 Score: 99.0 bits (245), Expect = 2.750e-23 Identity = 70/164 (42.68%), Postives = 97/164 (59.15%), Query Frame = 1 Query: 7 TDTYCQAVAVLLC--PCSFLPLIPGVMGKKRLLLEEEEAVLTSDCSWGCHEVSRMPYGELGNVREARVC-CCVGFSSNLTPGDGGLGKTIIPGNCCETALVAEIVRNLKARMKDRGDTGQIQRAEENVRQIQH-------LHAKIDALMERLQVAA-VPMPIAI 465 T+T +A + C PC+ +M K++L+LE EEAVL + + R PYGELG+V ++ C CCVG SS GLG + PG CE LVAEIV LK RMK RGDTGQIQRAE+ + +I L++K+DA++ L+++A VP +A+ Sbjct: 17 TNTLANTIAAM-CGWPCA-------LMNKQQLILEPEEAVLITSTMCDTN-TQRRPYGELGSVDKSSTCGCCVGVSS-------GLGA-MQPGCNCEEELVAEIVEELKKRMKTRGDTGQIQRAEQQLTEIMKVQSDMAALNSKVDAILAHLEISAPVPQAMAV 163
BLAST of mRNA_H-paniculata_contig1390.2390.1 vs. uniprot
Match: A0A7S4B582_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B582_CHRCT) HSP 1 Score: 99.0 bits (245), Expect = 2.750e-23 Identity = 64/132 (48.48%), Postives = 81/132 (61.36%), Query Frame = 1 Query: 85 KKRLLLEEEEAVLTSDCSWGCHEVSRMPYGELGNVREARVC-CCVGFSSNLTPGDGGLGKTIIPGNCCETALVAEIVRNLKARMKDRGDTGQIQRAEENVRQIQ-------HLHAKIDALMERLQVAAVPMP 456 ++RL+LE EEAVLT + V R PYGELG+V +A C CC SSNL P I PG CE LV EIV LK RMK RGDTGQIQRAE+ + +I +++AK+DA+++ L +AA P P Sbjct: 40 EQRLVLEPEEAVLTKKTLCDTN-VQRRPYGELGSVDKATSCGCCAAVSSNLGP--------ISPGFGCEAELVDEIVEELKKRMKTRGDTGQIQRAEQQLHEIAILKGEVANVNAKLDAVLQHLNIAA-PQP 161
BLAST of mRNA_H-paniculata_contig1390.2390.1 vs. uniprot
Match: A0A7S0J3X5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J3X5_9EUKA) HSP 1 Score: 95.5 bits (236), Expect = 6.610e-22 Identity = 63/139 (45.32%), Postives = 80/139 (57.55%), Query Frame = 1 Query: 46 PCSFLPLIPGVMGKKRLLLEEEEAVLTSDCSWGCHEVSRMPYGELGNVREARVC-CCVGFSSNLTPGDGGLGKTIIPGNCCETALVAEIVRNLKARMKDRGDTGQIQRAEEN---VRQIQ----HLHAKIDALMERLQV 438 PCSFL ++ L+LE EEAV+T G + V R PYGELG+V + C CC +S L P I PG CE ALV E+V LKARMK RGDTGQI+RAE+ + Q+Q L+ K+D +M LQ+ Sbjct: 44 PCSFL-------NEEHLVLEPEEAVMTRKTMCGTN-VQRRPYGELGSVDKGTACGCCTNVTSGLGP--------ISPGWGCEEALVDELVEELKARMKTRGDTGQIKRAEQQLDAITQVQLDIKQLNTKLDVIMAHLQI 166
BLAST of mRNA_H-paniculata_contig1390.2390.1 vs. uniprot
Match: A0A7S2EYK2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EYK2_TRICV) HSP 1 Score: 95.9 bits (237), Expect = 6.630e-22 Identity = 63/145 (43.45%), Postives = 81/145 (55.86%), Query Frame = 1 Query: 49 CSFLPLIPGVMG----KKRLLLEEEEAVLTSDCSWGCHEVSRMPYGELGNVREARVCCCVGFSSNLTPGDGGLGKTIIPGNCCETALVAEIVRNLKARMKDRGDTGQIQRAEENVRQIQHLHAKIDALMERLQVAAVPMPIAIDR 471 C +L P G +LLLE EE V T G VSR PYGELG+V + CC V +S LG+ I PG C+ + V EIV LKARM+ RGDT QIQRAEE ++++ L KID +M+ L++ P P +DR Sbjct: 50 CCWLAFFPFTFGTIPYSTKLLLEHEEIVKTDQNLCG-KTVSRRPYGELGSVDKGNFCCFVAATS-------ALGE-ISPGCGCDNSRVDEIVTELKARMRGRGDTAQIQRAEEQLKRLDDLETKIDLIMDHLEI---PKPDKMDR 182
BLAST of mRNA_H-paniculata_contig1390.2390.1 vs. uniprot
Match: A0A7S2ME03_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2ME03_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 2.170e-19 Identity = 56/129 (43.41%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 55 FLPLIPGVMGKKRLL-LEEEEAVLTSDCSWGCHEVSRMPYGELGNVREARVCCCVGFSSNLTPGDGGLGKTIIPGNCCETALVAEIVRNLKARMKDRGDTGQIQRAEENVRQIQHLHAKIDALMERLQV 438 F PL G + + +L LE+EEAV T G SR PYGELG+V +A CCV +S L PG C A V EIVR L+ RMK RGDT QIQ++E+ + ++ L KID +ME L + Sbjct: 24 FCPLTLGAVPYQTILVLEKEEAVRTDKSICGASS-SRRPYGELGSVDKANCLCCVQATSEL--------GEFSPGWGCNEATVDEIVRELRTRMKTRGDTAQIQQSEKQLEKLAELETKIDLIMEHLNI 143
BLAST of mRNA_H-paniculata_contig1390.2390.1 vs. uniprot
Match: A0A7S2U9S9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U9S9_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 2.230e-19 Identity = 56/137 (40.88%), Postives = 77/137 (56.20%), Query Frame = 1 Query: 61 PLIPGVMGKKRLLLEEEEAVLTSDCSWGCHEVSRMPYGELGNVREARVCCCVGFSSNLTPGDGGLGKTIIPGNCCETALVAEIVRNLKARMKDRGDTGQIQRAEENVRQIQHLHAKIDALMERLQVAAVPMPIAIDR 471 P G + K L+ + E V +D + VSR PYGELG+V ++ CC +S GLG+ I PG C+ V EIV +LK RMK RGDTGQI RAEE + +I L AK+D +++ L + P P ++R Sbjct: 25 PFTVGAVPYKTTLMLDGEEVNKTDVNLCGKTVSRRPYGELGSVDKSNCLCCYSVTS-------GLGE-IAPGCGCDEQKVDEIVSDLKQRMKGRGDTGQIARAEEQLDKIAQLEAKVDLILDHLNI---PQPNEMNR 150
BLAST of mRNA_H-paniculata_contig1390.2390.1 vs. uniprot
Match: A0A1Z5JJP7_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JJP7_FISSO) HSP 1 Score: 87.8 bits (216), Expect = 4.330e-19 Identity = 56/134 (41.79%), Postives = 74/134 (55.22%), Query Frame = 1 Query: 49 CSFLPLIPGVMG----KKRLLLEEEEAVLTSDCSWGCHEVSRMPYGELGNVREARVCCCVGFSSNLTPGDGGLGKTIIPGNCCETALVAEIVRNLKARMKDRGDTGQIQRAEENVRQIQHLHAKIDALMERLQV 438 C +L L+P G K LLL++EE T G H S+ PYGELG++ +A CC V S G G+ I PG CE V EIV LK RM+ RGDT QI RAEE + ++ + AK+DA++ L + Sbjct: 17 CCWLTLLPCTFGVVPYKTTLLLKQEEVTKTDIDLCGRH-TSKRPYGELGHIEKANCCCFVSVRS-------GFGE-ISPGCGCEKDTVDEIVLELKQRMRARGDTAQIVRAEETLSKLGEIEAKLDAILSHLNI 141
BLAST of mRNA_H-paniculata_contig1390.2390.1 vs. uniprot
Match: A0A8J2SJ06_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJ06_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 2.450e-13 Identity = 58/145 (40.00%), Postives = 78/145 (53.79%), Query Frame = 1 Query: 64 LIPGVMG-----KKRLLLEEEEA--VLTSDCSWGCHEVSRMPYGELGNVREARVC-CCVGFSSNLTPGDGGLGKTIIPGNC-CETALVAEIVRNLKARMKDRGDTGQIQRAEENVRQIQHLHA-------KIDALMERLQVAAVP 450 +IPG++ +++L LE EEA V T+ CS + R PYGEL V R CC F +T + C C LVAEIV+ LK RMK RGDTGQI+RAE+ + +IQ L A K+DA+++ L + A P Sbjct: 63 IIPGIIPLCCTLEQKLFLEPEEAHLVTTTCCST---QTQRRPYGELQAVEHLRCLGCCHCFQ---------FAETKVSPQCFCAGDLVAEIVKELKTRMKARGDTGQIKRAEQLLGEIQILKAQAQSTDAKLDAILKHLNIDAPP 195 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1390.2390.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1390.2390.1 >prot_H-paniculata_contig1390.2390.1 ID=prot_H-paniculata_contig1390.2390.1|Name=mRNA_H-paniculata_contig1390.2390.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=159bp MQTDTYCQAVAVLLCPCSFLPLIPGVMGKKRLLLEEEEAVLTSDCSWGCHback to top mRNA from alignment at H-paniculata_contig1390:3599..4075- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1390.2390.1 ID=mRNA_H-paniculata_contig1390.2390.1|Name=mRNA_H-paniculata_contig1390.2390.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=477bp|location=Sequence derived from alignment at H-paniculata_contig1390:3599..4075- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1390:3599..4075- >mRNA_H-paniculata_contig1390.2390.1 ID=mRNA_H-paniculata_contig1390.2390.1|Name=mRNA_H-paniculata_contig1390.2390.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=954bp|location=Sequence derived from alignment at H-paniculata_contig1390:3599..4075- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |