mRNA_H-paniculata_contig13803.2336.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13803.2336.1 vs. uniprot
Match: A0A401H2X4_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H2X4_9APHY) HSP 1 Score: 154 bits (390), Expect = 8.200e-42 Identity = 103/289 (35.64%), Postives = 144/289 (49.83%), Query Frame = 1 Query: 1 DLCSLSRVLGIEVRRDRPNGIITISQGSNIREVLKRYGFDECRGVPTPVGGK---VKISASESTHKPSEPKSGNSTEYRGMVGSLMYASTGPRPDIAYAIHQAARRMEDPCQEDSSTCKRIFRYLSTVPDLGIPFGG--KSNEP-----------KVHNR---------IRFQAERWCNKLL--VTWSSTEAEYDAAGEAGKETVCLRELLGSIGFGCRGRATLF*DNKSAIYLSKGSGAHCRTKHIGVRWHGIREWIRKGILALKYVQTGDQLTDILTKGLSRVQFQR 786 DL +LG+E+ RDRP ++ +SQ + + L +YG +CR V TP+ VK+S +E KP Y+ +GSLMYA G PD+A+ + ++ P +E R++RYL D + + G K EP +++R I A W +K SSTEAEY A KE V LR L IG +G L DN+SAI LSK + H RTKHI VR+H IRE G + +YV TG+Q+ D+LTKGL R + ++ Sbjct: 26 DLGEARWLLGMEITRDRPRRVLELSQHQYVEKCLAQYGMADCRPVSTPMAQNQKLVKLSEAEIDPKP----------YQSALGSLMYAMIGTHPDLAFTVSALSQHAATPGKEHWIALMRVYRYLRGTADKKLVYCGTTKEKEPLLGYVDADWAANINDRRSVTGFVFLISEGAVSWSSKRQHSTAQSSTEAEYMAGAHGTKEAVWLRTFLSEIGQVQKGPTPLLIDNQSAIALSKNAAFHERTKHIAVRYHFIREKYDSGEIEPEYVPTGNQVADVLTKGLPREKHEK 304
BLAST of mRNA_H-paniculata_contig13803.2336.1 vs. uniprot
Match: D1MBJ6_AGABI (Polyprotein n=1 Tax=Agaricus bisporus var. bisporus TaxID=192523 RepID=D1MBJ6_AGABI) HSP 1 Score: 159 bits (402), Expect = 1.500e-40 Identity = 101/275 (36.73%), Postives = 147/275 (53.45%), Query Frame = 1 Query: 1 DLCSLSRVLGIEVRRDRPNGIITISQGSNIREVLKRYGFDECRGVPTPVGGKVKISASESTHKPSEPKSGNSTEYRGMVGSLMYASTGPRPDIAYAIHQAARRMEDPCQEDSSTCKRIFRYLSTVPDLGIPFGGKSNEPK---------VHNR---------IRFQAERWCNKL--LVTWSSTEAEYDAAGEAGKETVCLRELLGSIGFGCRGRATLF*DNKSAIYLSKGSGAHCRTKHIGVRWHGIREWIRKGILALKYVQTGDQLTDILTKGL 765 DL + +LGIE+RR+R G + +SQ S I L+RYGF++ + V P+ + +S ++S + +E Y+ VGSLMYA+ RPDIA+AI ++ ++P ++ KR+FRYL +L + FGG+ + K +R I A W K +VT S+TE+EY AA A KET+ LR L+ + LF DN+SAI L+K H RTKHI +R+H IR + +G + L Y T D + D LTK L Sbjct: 1109 DLGEIHWLLGIEIRRNREEGKLYMSQRSYIDSCLRRYGFEDAKPVSIPMDPSIHLSTNQSPNSTTEIARMARIPYQEAVGSLMYAAIATRPDIAFAIQVLSKFSKNPGEKHWEAVKRVFRYLKGTRELWLTFGGQDDTLKGFADADGNMAEDRHATSGFAFIINGGAVSWSAKRQEIVTLSTTESEYVAATHAAKETLWLRSLISQVFNITLPTTRLFSDNQSAIALTKDHQFHSRTKHIDIRYHFIRWIVEEGKIRLVYCPTEDMVADTLTKAL 1383
BLAST of mRNA_H-paniculata_contig13803.2336.1 vs. uniprot
Match: A0A401H123_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H123_9APHY) HSP 1 Score: 157 bits (396), Expect = 9.100e-40 Identity = 104/289 (35.99%), Postives = 144/289 (49.83%), Query Frame = 1 Query: 1 DLCSLSRVLGIEVRRDRPNGIITISQGSNIREVLKRYGFDECRGVPTPVGGK---VKISASESTHKPSEPKSGNSTEYRGMVGSLMYASTGPRPDIAYAIHQAARRMEDPCQEDSSTCKRIFRYLSTVPDLGIPFGGKSNEPK-------------VHNR---------IRFQAERWCNKLL--VTWSSTEAEYDAAGEAGKETVCLRELLGSIGFGCRGRATLF*DNKSAIYLSKGSGAHCRTKHIGVRWHGIREWIRKGILALKYVQTGDQLTDILTKGLSRVQFQR 786 DL +LG+E+ RDRP ++ +SQ + + L ++G CR V TP+ VK+S +E KP Y+ +GSLMYA G RPD+A+ + ++ P +E R++RYL D + + G + E K V+NR I A W +K SSTEAEY A KE V LR L IG +G L DN+SAI LSK + H RTKHI VR+H IRE G + +YV TG+Q+ D+LTKGL R + ++ Sbjct: 826 DLGEARWLLGMEIARDRPRRVLELSQHQYVEKCLAQHGMANCRPVSTPMAQNQKLVKLSEAEIDPKP----------YQSALGSLMYAMIGTRPDLAFTVGALSQHAATPGKEHWIALMRVYRYLRGTADKKLVYCGTTKEKKPLLRYVDADWAANVNNRRSVTGFVFLISEGAVSWSSKRQHSTAQSSTEAEYMAGAHGTKEAVWLRAFLSEIGQVQKGPTPLLIDNQSAIALSKNAAFHERTKHIAVRYHFIREKYDSGEIEPEYVPTGNQVADVLTKGLPREKHEK 1104
BLAST of mRNA_H-paniculata_contig13803.2336.1 vs. uniprot
Match: A0A4Y9ZY34_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZY34_9AGAM) HSP 1 Score: 156 bits (395), Expect = 1.240e-39 Identity = 102/284 (35.92%), Postives = 142/284 (50.00%), Query Frame = 1 Query: 1 DLCSLSRVLGIEVRRDRPNGIITISQGSNIREVLKRYGFDECRGVPTPVGGKVKISASESTHKPSEPKSGNSTEYRGMVGSLMYASTGPRPDIAYAIHQAARRMEDPCQEDSSTCKRIFRYLSTVPDLGIPFGGKS----------------NEPKVHNRIRFQ----AERWCNKLLVTW--SSTEAEYDAAGEAGKETVCLRELLGSIGFGCRGRATLF*DNKSAIYLSKGSGAHCRTKHIGVRWHGIREWIRKGILALKYVQTGDQLTDILTKGLSRVQFQR 786 DL + VLG+EV RDR I +SQ + E+L+R G+ + R + TP A+E K P+ T Y+ +GSLMYA G RPD+AY + ++ P + R F+YL D + F GK N+ + + F A W +K T SSTEAEY AA A KE LR LG IG C+ L DN+SA+ +++ H RTKHI VR+H +RE + G + L+YV TGDQ+ D+LTKGL + + + Sbjct: 851 DLGEVHWVLGLEVIRDRNARTIALSQRRYVEEILERAGYSDARPIATPA------LANEHMAKVDAPEVDVLT-YQSGIGSLMYAMLGTRPDLAYTVGVLSQHTAKPGEAHQRALVRAFKYLRGTADYQLVFDGKKPWELTGYVDADWAGDVNDRRSISGYTFLLAGGAVSWSSKKQNTTALSSTEAEYIAAAHAAKEATWLRTFLGEIGRPCKTATLLLMDNQSAMAIARNPAFHARTKHIDVRYHFLREKVEAGAINLQYVPTGDQVADVLTKGLVKAKHDK 1127
BLAST of mRNA_H-paniculata_contig13803.2336.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT) HSP 1 Score: 156 bits (394), Expect = 1.750e-39 Identity = 100/287 (34.84%), Postives = 148/287 (51.57%), Query Frame = 1 Query: 1 DLCSLSRVLGIEVRRDRPNGIITISQGSNIREVLKRYGFDECRGVPTPVGGKVKISASESTHKPSEPKSGNSTEYRGMVGSLMYASTGPRPDIAYAIHQAARRMEDPCQEDSSTCKRIFRYLSTVPDLGIPFGGK--------------SNEPKVHNRIR---FQAE----RWCNKL--LVTWSSTEAEYDAAGEAGKETVCLRELLGSIGFGCRGRATLF*DNKSAIYLSKGSGAHCRTKHIGVRWHGIREWIRKGILALKYVQTGDQLTDILTKGLSRVQFQRLR 792 DL +S +LG+ ++RDR + +TISQ + VLKR+ +EC+ V TP+ + +P+ N EY+ ++G L Y +T RPD+A A+ ++ M P QE KRI RY+ + GI F K +N+ + FQ WC+K V+ SSTEAEY A A +E + LR LL +IG + + DN++AI LS+ H RTKHI V +H +RE ++ + + Y +T + L DILTKGL R F++LR Sbjct: 1063 DLGEVSHILGMLIKRDRDSRTLTISQSKYLEGVLKRFNMEECKPVSTPLEPGKQFHELSDDERPA-----NIHEYQKIIGCLTYVTTATRPDLAAAVGILSKYMTKPSQEHWKGVKRILRYIKGTLNFGITFQAKDQTCILTGYSDADWANDTETRRSTSGYIFQISGCTISWCSKKQSCVSRSSTEAEYMALSLATQEAIWLRRLLENIGVKQKESTVMCEDNQAAIQLSRNPKFHNRTKHIDVAFHFVREKVQDKSIDVVYCRTDEMLADILTKGLPRQTFEKLR 1344
BLAST of mRNA_H-paniculata_contig13803.2336.1 vs. uniprot
Match: J9KJ72_ACYPI (Integrase catalytic domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9KJ72_ACYPI) HSP 1 Score: 154 bits (389), Expect = 8.050e-39 Identity = 94/285 (32.98%), Postives = 148/285 (51.93%), Query Frame = 1 Query: 13 LSRVLGIEVRRDRPNGIITISQGSNIREVLKRYGFDECRGVPTPVGGKVKISASESTHKPSEPKSGNSTEYRGMVGSLMYASTGPRPDIAYAIHQAARRMEDPCQEDSSTCKRIFRYLSTVPDLGIPFGGKSNEPKVHNRIRFQAERWCNKL----------------LVTWS----------STEAEYDAAGEAGKETVCLRELLGSIGFGCRGRATLF*DNKSAIYLSKGSGAHCRTKHIGVRWHGIREWIRKGILALKYVQTGDQLTDILTKGLSRVQFQRL 789 L+ LG+++ D+ G + I+Q + +VLK++ D C + TP+ K+ I ++ + ++P YR +VGSLMYA G RPD++YA++ R P + + KR+ RY+ + G+ F +SN ++ I F W + LV+WS STEAEY A A E + +R+LL + G LF DN+ AI+LS H R+KHI + H +RE +++G++ LKY+ T +QL D+LTKGL +F+RL Sbjct: 1000 LNYFLGLKINYDKTVGKLYINQTQYLEDVLKKFNMDNCNTISTPIESKLNIEE-DNKQECNQP-------YRQLVGSLMYAMLGSRPDLSYALNFFCRYQSKPNECHWNHLKRVLRYVKGTLNNGLCFHRQSNSTEL---IGFVDADWASSTIDRKSTTGYLFKVFNCLVSWSTKRQPTVALSSTEAEYMAVSNATCEAIWIRKLLKDLDVTICGPVILFEDNQGAIHLSSSQELHKRSKHIDTKHHFVREKVKEGLIELKYIPTSNQLADLLTKGLGNERFKRL 1273
BLAST of mRNA_H-paniculata_contig13803.2336.1 vs. uniprot
Match: A0A8H7KIG6_AGABI (Integrase catalytic domain-containing protein n=2 Tax=Agaricus bisporus var. burnettii TaxID=192524 RepID=A0A8H7KIG6_AGABI) HSP 1 Score: 154 bits (388), Expect = 1.110e-38 Identity = 100/275 (36.36%), Postives = 142/275 (51.64%), Query Frame = 1 Query: 1 DLCSLSRVLGIEVRRDRPNGIITISQGSNIREVLKRYGFDECRGVPTPVGGKVKISASESTHKPSEPKSGNSTEYRGMVGSLMYASTGPRPDIAYAIHQAARRMEDPCQEDSSTCKRIFRYLSTVPDLGIPFGGKSNEPK---------VHNR---------IRFQAERWCNKL--LVTWSSTEAEYDAAGEAGKETVCLRELLGSIGFGCRGRATLF*DNKSAIYLSKGSGAHCRTKHIGVRWHGIREWIRKGILALKYVQTGDQLTDILTKGL 765 DL + +LGIE+RRDR G + +SQ S I L+RYGF++ + V P+ + S ++S +E Y+ VGSLMYA+ RPDIA+AI ++ ++P + KR+FRYL +L + FGG+ + + +R I A W K +VT S+TE+EY A A KE + LR L+ I LF DN+SAI L+K H RTKHI +R+H IR + +G + L Y T D + D LTK L Sbjct: 1107 DLGEIHWLLGIEIRRDRNEGKLYMSQRSYIDSCLRRYGFEDAKPVSIPMDPSIHYSTNQSPKSTAEIARMARIPYQEAVGSLMYAAIATRPDIAFAIQVLSKFSKNPGIDHWEAVKRVFRYLKGTKELWLTFGGQGDTLEGFADADGNMAEDRHAISGFAFIINGGAVSWSAKRQEIVTLSTTESEYVAVTHATKEALWLRSLISQIFGAILPTTPLFSDNQSAIALTKDHKYHGRTKHIDIRYHFIRWIVEEGKVRLVYCPTADMIADTLTKAL 1381
BLAST of mRNA_H-paniculata_contig13803.2336.1 vs. uniprot
Match: A0A6D2J1R0_9BRAS (Uncharacterized protein n=2 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2J1R0_9BRAS) HSP 1 Score: 153 bits (386), Expect = 2.040e-38 Identity = 99/275 (36.00%), Postives = 145/275 (52.73%), Query Frame = 1 Query: 1 DLCSLSRVLGIEVRRDRPNGIITISQGSNIREVLKRYGFDECRGVPTPVGGKVKISASESTHKPSEPKSGNSTEYRGMVGSLMYASTGPRPDIAYAIHQAARRMEDPCQEDSSTCKRIFRYLSTVPDLGI----------------PFGGKSNEPKVHNRIRF----QAERWCNKL--LVTWSSTEAEYDAAGEAGKETVCLRELLGSIGFGCRGRATLF*DNKSAIYLSKGSGAHCRTKHIGVRWHGIREWIRKGILALKYVQTGDQLTDILTK 759 DL + SR+LGI+++RDR G++ +SQ + +V+KR+ E + V TP+GG K+SA SE Y VGSLMYA G RPD+AYAI +R M P K + RY+ DL + F G + ++ + F W + L + S+TEAEY A EA KE + ++ L+ +GF +AT++ D++SAI LSK S H RTKHI V++H IR+ I +G +A++ + T + DILTK Sbjct: 1070 DLGAASRILGIDIKRDRKEGVLWLSQSGYLGKVIKRFNMVEAKTVNTPMGGHFKLSAVSDA---SECVDTEKVPYSSAVGSLMYAMVGTRPDLAYAIGLVSRFMSKPGSIHWEAVKWLLRYVKRSSDLSLVFRRNKDFRVQGYCDSDFAGDLDRKRLTSGYVFTVGGNTVSWRSGLQQITALSTTEAEYIALTEAVKEAIWIKGLVKDMGFE-EEKATIWCDSQSAICLSKNSTFHERTKHIAVKYHFIRDIIEEGEVAVEKIDTSENPADILTK 1340
BLAST of mRNA_H-paniculata_contig13803.2336.1 vs. uniprot
Match: A0A401G4V0_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G4V0_9APHY) HSP 1 Score: 153 bits (386), Expect = 2.100e-38 Identity = 104/284 (36.62%), Postives = 142/284 (50.00%), Query Frame = 1 Query: 1 DLCSLSRVLGIEVRRDRPNGIITISQGSNIREVLKRYGFDECRGVPTPVGGK---VKISASESTHKPSEPKSGNSTEYRGMVGSLMYASTGPRPDIAYAIHQAARRMEDPCQEDSSTCKRIFRYLSTVPDLGIPFGG--KSNEP-----------KVHNR---------IRFQAERWCNKLL--VTWSSTEAEYDAAGEAGKETVCLRELLGSIGFGCRGRATLF*DNKSAIYLSKGSGAHCRTKHIGVRWHGIREWIRKGILALKYVQTGDQLTDILTKGLSR 771 DL +LG+E+ RDRP ++ +SQ + + L ++G +CR V TP+ VK+S +E KP Y+ ++GSLMYA G RPD+A+ + ++ P +E R +RYL D + + G K EP V++R I A W +K SSTEAEY A KE V LR L IG +G L DN+SAI LSK + H RTKHI VR+H IRE G + +YV TG+Q+ D+LTKGL R Sbjct: 1149 DLGEARWLLGMEITRDRPRRVLELSQHQYVEKCLAQHGMADCRPVSTPMAQNQKLVKLSEAEIDPKP----------YQSVLGSLMYAMIGTRPDLAFTVGALSQHAATPGKEHWIALMRAYRYLRGTADKKLVYCGTTKEKEPLLGYVDADWAANVNDRRSVTGFVFLISEGAVSWSSKRQHSTAQSSTEAEYMAGAHGTKEAVWLRAFLSEIGQVQKGPTPLLIDNQSAIALSKNAAFHERTKHIAVRYHFIREKYDSGEIEPEYVPTGNQVADVLTKGLPR 1422
BLAST of mRNA_H-paniculata_contig13803.2336.1 vs. uniprot
Match: A0A6D2KZJ0_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KZJ0_9BRAS) HSP 1 Score: 148 bits (373), Expect = 2.590e-38 Identity = 101/283 (35.69%), Postives = 147/283 (51.94%), Query Frame = 1 Query: 1 DLCSLSRVLGIEVRRDRPNGIITISQGSNIREVLKRYGFDECRGVPTPVGGKVKISASESTHKPSEPKSGNSTEYRGMVGSLMYASTGPRPDIAYAIHQAARRMEDPCQEDSSTCKRIFRYLSTVPDLGI----------------PFGGKSNEPKVHNRIRFQAE----RWCNKL--LVTWSSTEAEYDAAGEAGKETVCLRELLGSIGFGCRGRATLF*DNKSAIYLSKGSGAHCRTKHIGVRWHGIREWIRKGILALKYVQTGDQLTDILTKGLSRVQFQ 783 D+ SR+LGI++RRDR G++ +SQ S + +V++++ E + V TP+GG K+SA + SE Y +VGS+MYA G RPDIAYAI + M P K + RY+ DL + F G ++ K + F W + L +VT S+ EAEY A EA KE + ++ LL ++GFG RA ++ D++SAI LSK + H RTKHI ++H IRE I +G + + V T DILTK + F+ Sbjct: 129 DMGPASRILGIDIRRDREAGVLYLSQASYLEKVVQKFKMKEAKSVNTPMGGHFKLSA---VTEDSECIDTEKYPYSSVVGSIMYAMIGTRPDIAYAIGLVSMFMSKPGMMHWEAVKWLLRYIKGSSDLEVVFTKNKNFNIQGYCDSDFAGDRDKRKSTSGYVFTVGGNTISWRSNLQPVVTLSTIEAEYIALTEAVKEAIWIKGLLKNMGFG-EERAMVWCDSQSAICLSKNNVFHERTKHISYKYHFIREVIEEGEVEVSKVHTSVNPADILTKSVRVSTFE 407 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13803.2336.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13803.2336.1 >prot_H-paniculata_contig13803.2336.1 ID=prot_H-paniculata_contig13803.2336.1|Name=mRNA_H-paniculata_contig13803.2336.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=122bp MVGSLMYASTGPRPDIAYAIHQAARRMEDPCQEDSSTCKRIFRYLSTVPDback to top mRNA from alignment at H-paniculata_contig13803:4133..5062+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13803.2336.1 ID=mRNA_H-paniculata_contig13803.2336.1|Name=mRNA_H-paniculata_contig13803.2336.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=930bp|location=Sequence derived from alignment at H-paniculata_contig13803:4133..5062+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13803:4133..5062+ >mRNA_H-paniculata_contig13803.2336.1 ID=mRNA_H-paniculata_contig13803.2336.1|Name=mRNA_H-paniculata_contig13803.2336.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=732bp|location=Sequence derived from alignment at H-paniculata_contig13803:4133..5062+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |