prot_H-paniculata_contig13803.2336.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig13803.2336.1
Unique Nameprot_H-paniculata_contig13803.2336.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length122
Homology
BLAST of mRNA_H-paniculata_contig13803.2336.1 vs. uniprot
Match: A0A284QR55_ARMOS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284QR55_ARMOS)

HSP 1 Score: 74.7 bits (182), Expect = 3.380e-13
Identity = 47/141 (33.33%), Postives = 69/141 (48.94%), Query Frame = 0
Query:    2 VGSLMYASTGPRPDIAYAIHQAARRMEDPCQEDSSTCKRIFRYLSTVPDLGIPFGGKSNEPKVHNRIRFQAERWCNKLL-----------VTWSST----------EAEYDAAGEAGKETVCLRELLGSIGFGCRGRATLF 121
            VGSLMYA+ G RPDIA+A+ + ++ +++P  E  +  KR+FRYL    D GI +G   +E   ++   +  +R   +             VTWSS           EAEY A     +E + LR LL  +G    G  T+F
Sbjct:  282 VGSLMYAANGSRPDIAHAVTELSKYVQNPAAEHVTALKRVFRYLKGTLDSGITYGRTMDELIPYSDSDWGEDRADRRSTSGYVCTYAGGAVTWSSKKQPTVALSTMEAEYMALAHTTREVIWLRALLTELGLPPDGATTIF 422          
BLAST of mRNA_H-paniculata_contig13803.2336.1 vs. uniprot
Match: A0A0J7KAJ4_LASNI (Rna-dependent dna polymerase n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KAJ4_LASNI)

HSP 1 Score: 70.1 bits (170), Expect = 2.050e-12
Identity = 47/136 (34.56%), Postives = 67/136 (49.26%), Query Frame = 0
Query:    1 MVGSLMYASTGPRPDIAYAIHQAARRMEDPCQEDSSTCKRIFRYLSTVPDLGIPFGGKSNEPKVHNRIRFQAERWCN-----------KLL----VTW----------SSTEAEYDAAGEAGKETVCLRELLGSIG 111
            +VGSLMY +   RPD+AY +   ++ ++ P  E  +  KR+ RYL+   D+GI +G +    K+   + +    W N            LL    VTW          S+T+AEY AA +AGKE V  R LL  IG
Sbjct:   33 LVGSLMYLAVVTRPDLAYTVATLSKFLDSPTDEHWNAGKRVLRYLAGTTDIGIMYG-RDRSTKL---VAYSDADWANCVNTRRSTSGVVLLNGGPVTWFSRKQGVVATSTTDAEYVAAHDAGKEIVWARRLLKKIG 164          
BLAST of mRNA_H-paniculata_contig13803.2336.1 vs. uniprot
Match: A0A8H7CF79_9AGAR (Transcription factor n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H7CF79_9AGAR)

HSP 1 Score: 71.6 bits (174), Expect = 4.540e-12
Identity = 46/130 (35.38%), Postives = 64/130 (49.23%), Query Frame = 0
Query:    1 MVGSLMYASTGPRPDIAYAIHQAARRMEDPCQEDSSTCKRIFRYLSTVPDLGIPFG------------GKSNEPKVH----NRIRFQAE--RWCNK--LLVTWSSTEAEYDAAGEAGKETVCLRELLGSI 110
            ++GSLMYA+ G RPDIAYA+   AR M  P +      KR+ RYL+   +  I FG              +++P  H    N   F      W ++   L+  S+TEAEY AA  A +E   LR L+G +
Sbjct: 1630 LIGSLMYAAIGTRPDIAYAVSLLARFMSKPKRIHWDAAKRVLRYLTGSKNYAITFGLDDSGFVAYTDADHASQPDRHSISGNLFLFDGAPIAWSSRKQALIALSTTEAEYIAAASAAREITWLRNLVGEL 1759          
BLAST of mRNA_H-paniculata_contig13803.2336.1 vs. uniprot
Match: A0A2X0M130_9BASI (BQ5605_C003g02258 protein n=6 Tax=Microbotryum TaxID=34416 RepID=A0A2X0M130_9BASI)

HSP 1 Score: 71.2 bits (173), Expect = 6.130e-12
Identity = 46/132 (34.85%), Postives = 66/132 (50.00%), Query Frame = 0
Query:    2 VGSLMYASTGPRPDIAYAIHQAARRMEDPCQEDSSTCKRIFRYLSTVPDLGIPFGGKS-------------NEPKVHNRIRFQAER-------WCNKL--LVTWSSTEAEYDAAGEAGKETVCLRELLGSIG 111
            VGSL YAST  RPDIA A+   A++   P  +D +  KRIFRYL++  DLGI +   S             ++P+    +   A         W +K   ++  S+TEAE  +A  A +E + LR L G +G
Sbjct: 1167 VGSLQYASTRCRPDIAIAVRAVAQKNSCPTVDDWAAVKRIFRYLNSTIDLGILYRNSSTTRLMVYSDALFADDPESRRSVGAYASMLAGGVISWQSKQQSMIATSTTEAEILSASSATREAIWLRRLAGDVG 1298          
BLAST of mRNA_H-paniculata_contig13803.2336.1 vs. uniprot
Match: A0A2X0PLR8_9BASI (BQ5605_C023g09718 protein n=1 Tax=Microbotryum silenes-dioicae TaxID=796604 RepID=A0A2X0PLR8_9BASI)

HSP 1 Score: 71.2 bits (173), Expect = 6.240e-12
Identity = 46/132 (34.85%), Postives = 66/132 (50.00%), Query Frame = 0
Query:    2 VGSLMYASTGPRPDIAYAIHQAARRMEDPCQEDSSTCKRIFRYLSTVPDLGIPFGGKS-------------NEPKVHNRIRFQAER-------WCNKL--LVTWSSTEAEYDAAGEAGKETVCLRELLGSIG 111
            VGSL YAST  RPDIA A+   A++   P  +D +  KRIFRYL++  DLGI +   S             ++P+    +   A         W +K   ++  S+TEAE  +A  A +E + LR L G +G
Sbjct: 1964 VGSLQYASTRCRPDIAIAVRAVAQKNSCPTVDDWAAVKRIFRYLNSTIDLGILYRNSSTTRLMVYSDASFADDPESRRSVGAYASMLAGGVISWQSKQQSMIATSTTEAEILSASSATREAIWLRRLAGDVG 2095          
BLAST of mRNA_H-paniculata_contig13803.2336.1 vs. uniprot
Match: A0A2X0PP63_9BASI (RNA-directed DNA polymerase n=6 Tax=Microbotryum TaxID=34416 RepID=A0A2X0PP63_9BASI)

HSP 1 Score: 71.2 bits (173), Expect = 6.300e-12
Identity = 46/132 (34.85%), Postives = 66/132 (50.00%), Query Frame = 0
Query:    2 VGSLMYASTGPRPDIAYAIHQAARRMEDPCQEDSSTCKRIFRYLSTVPDLGIPFGGKS-------------NEPKVHNRIRFQAER-------WCNKL--LVTWSSTEAEYDAAGEAGKETVCLRELLGSIG 111
            VGSL YAST  RPDIA A+   A++   P  +D +  KRIFRYL++  DLGI +   S             ++P+    +   A         W +K   ++  S+TEAE  +A  A +E + LR L G +G
Sbjct: 1824 VGSLQYASTRCRPDIAIAVRAVAQKNSCPTVDDWAAVKRIFRYLNSTIDLGILYRNSSTTRLMVYSDASFADDPESRRSVGAYASMLAGGVISWQSKQQSMIATSTTEAEILSASSATREAIWLRRLAGDVG 1955          
BLAST of mRNA_H-paniculata_contig13803.2336.1 vs. uniprot
Match: A0A4S4MCE6_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4MCE6_9APHY)

HSP 1 Score: 70.1 bits (170), Expect = 1.020e-11
Identity = 43/128 (33.59%), Postives = 62/128 (48.44%), Query Frame = 0
Query:    1 MVGSLMYASTGPRPDIAYAIHQAARRMEDPCQEDSSTCKRIFRYLSTVPDLGIPFGGKS-------------NEPKVHNRIRFQAERWCNKL--------LVTWSSTEAEYDAAGEAGKETVCLRELL 107
            ++GSLMYA+ G RPDI +A+   AR M DP        KR+ RYL    D  + FGG +             ++P  H+   F     C  +        L+  SSTEAEY +A ++ +E + LR L+
Sbjct:  115 LIGSLMYAAIGTRPDIMFAVSTLARFMSDPSVIHWEAGKRVLRYLKGTRDHRLTFGGDTPAVLTGFTDADWASQPHRHSISGFVFTYACGAISWGSHKQSLIALSSTEAEYISASDSCRELIYLRSLI 242          
BLAST of mRNA_H-paniculata_contig13803.2336.1 vs. uniprot
Match: A0A060SR77_PYCCI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SR77_PYCCI)

HSP 1 Score: 70.5 bits (171), Expect = 1.090e-11
Identity = 50/149 (33.56%), Postives = 63/149 (42.28%), Query Frame = 0
Query:    1 MVGSLMYASTGPRPDIAYAIHQAARRMEDPCQEDSSTCKRIFRYLSTVPDLGIPFGGKSNEPKVH--NRIRFQAERWCNKL----------------LVTWSST----------EAEYDAAGEAGKETVCLRELLGSIGFGCRGRATLF 121
            MVGSLMYA+ G RPDIA+A+ Q ++   +P        KR+ RYL     LGI +   +     H    I +    W N L                 +TWSS           EAEY AA  A  E   LR LL  +GF   G   L+
Sbjct:  530 MVGSLMYAALGTRPDIAHAVQQLSQYASNPGPAHIMAAKRVLRYLKGTRMLGIIYCANATTDSDHPLEPIGYSDADWANDLDDRKSIAGQVFLLGGAPITWSSRKQRTVAKSSMEAEYMAASAAASEIAWLRALLTELGFPPSGPTPLY 678          
BLAST of mRNA_H-paniculata_contig13803.2336.1 vs. uniprot
Match: A0A2X0MQQ7_9BASI (BQ5605_C026g10266 protein n=2 Tax=Microbotryum silenes-dioicae TaxID=796604 RepID=A0A2X0MQQ7_9BASI)

HSP 1 Score: 70.5 bits (171), Expect = 1.130e-11
Identity = 46/132 (34.85%), Postives = 65/132 (49.24%), Query Frame = 0
Query:    2 VGSLMYASTGPRPDIAYAIHQAARRMEDPCQEDSSTCKRIFRYLSTVPDLGIPFGGKS-------------NEPKVHNRIRFQAER-------WCNKL--LVTWSSTEAEYDAAGEAGKETVCLRELLGSIG 111
            VGSL YAST  RPDIA A+   A++   P  +D +  KRIFRYL++  DLGI +   S             ++P+    +   A         W +K   ++  S+TEAE   A  A +E + LR L G +G
Sbjct:  849 VGSLQYASTRCRPDIAIAVRAVAQKNSCPTVDDWAAVKRIFRYLNSTIDLGILYRNSSTTRLMVYSDASFADDPESRRLVGAYASMLAGGVISWQSKQQSMIATSTTEAEILCASSATREAIWLRRLAGDVG 980          
BLAST of mRNA_H-paniculata_contig13803.2336.1 vs. uniprot
Match: Q45W64_PHACR (Polyprotein n=1 Tax=Phanerochaete chrysosporium (strain RP-78 / ATCC MYA-4764 / FGSC 9002) TaxID=273507 RepID=Q45W64_PHACR)

HSP 1 Score: 70.5 bits (171), Expect = 1.140e-11
Identity = 44/132 (33.33%), Postives = 63/132 (47.73%), Query Frame = 0
Query:    2 VGSLMYASTGPRPDIAYAIHQAARRMEDPCQEDSSTCKRIFRYLSTVPDLGIPFGGKSNEP----------KVHNRIRFQAER---------WCNKL--LVTWSSTEAEYDAAGEAGKETVCLRELLGSIGF 112
            +GSLMYA+TG RPDIA+A+   ++    P     +  K +FRYL    D+G+ F  ++++           + H+R                W +K    V  S+ EAEY A   A KE V LR LL  +GF
Sbjct: 1124 IGSLMYAATGTRPDIAFAVQTLSQFTSRPSATHWTAVKHVFRYLKGTTDVGLTFARRADDDITGYSDADWAQAHDRRSVSGYAYLLAGGIVSWNSKKQPTVALSTMEAEYIALSHAAKEAVWLRRLLTELGF 1255          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13803.2336.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A284QR55_ARMOS3.380e-1333.33Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0J7KAJ4_LASNI2.050e-1234.56Rna-dependent dna polymerase n=1 Tax=Lasius niger ... [more]
A0A8H7CF79_9AGAR4.540e-1235.38Transcription factor n=1 Tax=Mycena sanguinolenta ... [more]
A0A2X0M130_9BASI6.130e-1234.85BQ5605_C003g02258 protein n=6 Tax=Microbotryum Tax... [more]
A0A2X0PLR8_9BASI6.240e-1234.85BQ5605_C023g09718 protein n=1 Tax=Microbotryum sil... [more]
A0A2X0PP63_9BASI6.300e-1234.85RNA-directed DNA polymerase n=6 Tax=Microbotryum T... [more]
A0A4S4MCE6_9APHY1.020e-1133.59Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A060SR77_PYCCI1.090e-1133.56Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2X0MQQ7_9BASI1.130e-1134.85BQ5605_C026g10266 protein n=2 Tax=Microbotryum sil... [more]
Q45W64_PHACR1.140e-1133.33Polyprotein n=1 Tax=Phanerochaete chrysosporium (s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..57
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 1..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13803contigH-paniculata_contig13803:4424..4858 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13803.2336.1mRNA_H-paniculata_contig13803.2336.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig13803 4133..5062 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig13803.2336.1 ID=prot_H-paniculata_contig13803.2336.1|Name=mRNA_H-paniculata_contig13803.2336.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=122bp
MVGSLMYASTGPRPDIAYAIHQAARRMEDPCQEDSSTCKRIFRYLSTVPD
LGIPFGGKSNEPKVHNRIRFQAERWCNKLLVTWSSTEAEYDAAGEAGKET
VCLRELLGSIGFGCRGRATLF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like