mRNA_H-paniculata_contig13802.2335.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13802.2335.1 vs. uniprot
Match: D8LL63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL63_ECTSI) HSP 1 Score: 209 bits (533), Expect = 1.680e-63 Identity = 105/132 (79.55%), Postives = 117/132 (88.64%), Query Frame = 1 Query: 4 ARFVHVSSAGVTRPGRPDLDVEAEPPAVRMNDMLSYLLTYKLKGEDVIRNSGIPETIIRPCALTEEPPGAPIIVAQGDNIKGKISRDDIAELAVHSLLTPKAGGLTFEVKSDLAFSTVWEAEDDRRP-RDYG 396 +RFVH+SSAGVTRPGRPDLD++ EPPAVRMN+MLS+LLTYKLKGEDVIR+SGIP TIIRPCALTEEP GAP+IV QGD +KGKISRDDIAELAV SLLTP+A GLTFEVKSDLAFST+W+ P R YG Sbjct: 309 SRFVHLSSAGVTRPGRPDLDMDTEPPAVRMNEMLSHLLTYKLKGEDVIRDSGIPATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLLTPEASGLTFEVKSDLAFSTLWQGAPQGAPARSYG 440
BLAST of mRNA_H-paniculata_contig13802.2335.1 vs. uniprot
Match: A0A6H5KMW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMW5_9PHAE) HSP 1 Score: 211 bits (537), Expect = 1.800e-62 Identity = 106/132 (80.30%), Postives = 116/132 (87.88%), Query Frame = 1 Query: 4 ARFVHVSSAGVTRPGRPDLDVEAEPPAVRMNDMLSYLLTYKLKGEDVIRNSGIPETIIRPCALTEEPPGAPIIVAQGDNIKGKISRDDIAELAVHSLLTPKAGGLTFEVKSDLAFSTVWEAEDDRRP-RDYG 396 +R VH+SSAGVTRPGRPDLD++ EPPAVRMN+MLSYLLTYKLKGEDVIR+SGIP TIIRPCALTEEP GAP+IV QGD +KGKISRDDIAELAV SLLTP+A GLTFEVKSDLAFST+WE P R YG Sbjct: 492 SRLVHLSSAGVTRPGRPDLDIDTEPPAVRMNEMLSYLLTYKLKGEDVIRDSGIPATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLLTPEASGLTFEVKSDLAFSTLWEGAPQGTPARSYG 623
BLAST of mRNA_H-paniculata_contig13802.2335.1 vs. uniprot
Match: W7TT61_9STRA (Nadh:ubiquinone oxidoreductase complex i intermediate-associated protein 30 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TT61_9STRA) HSP 1 Score: 171 bits (432), Expect = 1.100e-47 Identity = 86/125 (68.80%), Postives = 98/125 (78.40%), Query Frame = 1 Query: 7 RFVHVSSAGVTRPGRPDLDVEAEPPAVRMNDMLSYLLTYKLKGEDVIRNSGIPETIIRPCALTEEPPGAPIIVAQGDNIKGKISRDDIAELAVHSLLTPKAGGLTFEVKSDLAFSTVWEAEDDRR 381 RFVH+SSAGV RPGRP + +E EPPAVRMNDML +LTYKLKGE+ IR SG+P TIIRPCALTEEP P+ V GD IKGK+SRDD+A LAV++L P+A LTFEVKS LAFS W AED R Sbjct: 455 RFVHISSAGVERPGRPGVVLEEEPPAVRMNDMLGGILTYKLKGEEAIRASGLPYTIIRPCALTEEPANMPLEVDVGDTIKGKVSRDDVARLAVYALACPEATDLTFEVKSSLAFSQQWTAEDAAR 579
BLAST of mRNA_H-paniculata_contig13802.2335.1 vs. uniprot
Match: A0A0G4FWF9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FWF9_VITBC) HSP 1 Score: 169 bits (428), Expect = 1.200e-47 Identity = 81/123 (65.85%), Postives = 98/123 (79.67%), Query Frame = 1 Query: 7 RFVHVSSAGVTRPGRPDLDVEAEPPAVRMNDMLSYLLTYKLKGEDVIRNSGIPETIIRPCALTEEPPGAPIIVAQGDNIKGKISRDDIAELAVHSLLTPKAGGLTFEVKSDLAFSTVWEAEDD 375 R + VSSAGVTRPGRP LD+E EPPAVRMNDML +LTYKLKGEDV+R+SG+ ++IRPCALTEEP GAP+ + QGD IKGKISR+D+A+L V SLLTP A T+E+K L FS W+ + D Sbjct: 359 RLIQVSSAGVTRPGRPGLDLEKEPPAVRMNDMLGGILTYKLKGEDVVRDSGVTYSVIRPCALTEEPAGAPLQIGQGDEIKGKISREDVADLVVASLLTPAAANKTYEIKCTLPFSEPWQPKAD 481
BLAST of mRNA_H-paniculata_contig13802.2335.1 vs. uniprot
Match: K8YQM7_NANGC (Nadh:ubiquinone oxidoreductase complex i intermediate-associated protein 30 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YQM7_NANGC) HSP 1 Score: 171 bits (432), Expect = 1.090e-46 Identity = 86/125 (68.80%), Postives = 98/125 (78.40%), Query Frame = 1 Query: 7 RFVHVSSAGVTRPGRPDLDVEAEPPAVRMNDMLSYLLTYKLKGEDVIRNSGIPETIIRPCALTEEPPGAPIIVAQGDNIKGKISRDDIAELAVHSLLTPKAGGLTFEVKSDLAFSTVWEAEDDRR 381 RFVH+SSAGV RPGRP + +E EPPAVRMNDML +LTYKLKGE+ IR SG+P TIIRPCALTEEP P+ V GD IKGK+SRDD+A LAV++L P+A LTFEVKS LAFS W AED R Sbjct: 455 RFVHISSAGVERPGRPGVVLEEEPPAVRMNDMLGGILTYKLKGEEAIRASGLPYTIIRPCALTEEPANMPLEVDVGDTIKGKVSRDDVARLAVYALACPEATDLTFEVKSSLAFSQQWTAEDAAR 579
BLAST of mRNA_H-paniculata_contig13802.2335.1 vs. uniprot
Match: A0A022QLG4_ERYGU (Uncharacterized protein (Fragment) n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QLG4_ERYGU) HSP 1 Score: 157 bits (398), Expect = 1.250e-45 Identity = 80/131 (61.07%), Postives = 98/131 (74.81%), Query Frame = 1 Query: 7 RFVHVSSAGVTRPGRPDLDVEAEPPAVRMNDMLSYLLTYKLKGEDVIRNSGIPETIIRPCALTEEPPGAPIIVAQGDNIKGKISRDDIAELAVHSLLTPKAGGLTFEVKSDLAFSTVWEAEDDRRP--RDY 393 RFVHV SAGVTRP RP LD+ +PPAVR+N L ++LTYKLKGED+IR SGIP TIIRPCALTEEP GA +IV QGDNI GKISRD++A + + +L +P A TFEVKS + FS + + + P +DY Sbjct: 103 RFVHVGSAGVTRPDRPGLDLSKQPPAVRLNKELDFILTYKLKGEDLIRESGIPYTIIRPCALTEEPAGADLIVEQGDNITGKISRDEVARMCIAALESPYACDKTFEVKSVIPFSEPYTVDPENPPPEKDY 233
BLAST of mRNA_H-paniculata_contig13802.2335.1 vs. uniprot
Match: A0A2P6Q4X2_ROSCH (Putative NAD(P)-binding domain-containing protein n=4 Tax=Rosoideae TaxID=171638 RepID=A0A2P6Q4X2_ROSCH) HSP 1 Score: 155 bits (392), Expect = 1.480e-45 Identity = 78/131 (59.54%), Postives = 99/131 (75.57%), Query Frame = 1 Query: 7 RFVHVSSAGVTRPGRPDLDVEAEPPAVRMNDMLSYLLTYKLKGEDVIRNSGIPETIIRPCALTEEPPGAPIIVAQGDNIKGKISRDDIAELAVHSLLTPKAGGLTFEVKSDLAFSTVWEAEDDRRP--RDY 393 RFVHV SAGVTRP RP LD+ +PPAVR+N L ++LT+KLKGED+IR SGIP TI+RPCALTEEP GA +I QGDNI GKISR+++A++ V +L +P A G TFEVKS + FS + + + P +DY Sbjct: 38 RFVHVGSAGVTRPERPGLDLSKQPPAVRLNKELDFILTFKLKGEDLIRESGIPYTIVRPCALTEEPAGADLIFDQGDNITGKISREEVAQICVAALESPYATGKTFEVKSVIPFSEPFTVDPENPPPEKDY 168
BLAST of mRNA_H-paniculata_contig13802.2335.1 vs. uniprot
Match: A0A1R3L5G1_ASPOF (NAD(P)-bd_dom domain-containing protein n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A1R3L5G1_ASPOF) HSP 1 Score: 156 bits (394), Expect = 1.940e-45 Identity = 78/133 (58.65%), Postives = 99/133 (74.44%), Query Frame = 1 Query: 1 MARFVHVSSAGVTRPGRPDLDVEAEPPAVRMNDMLSYLLTYKLKGEDVIRNSGIPETIIRPCALTEEPPGAPIIVAQGDNIKGKISRDDIAELAVHSLLTPKAGGLTFEVKSDLAFSTVWEAEDDRRP--RDY 393 + RFVHVSSAGVTRPGRP LD+ +PPAVR+N L ++LTYKLKGED+IR SGIP TI+RPCAL+EEP GA +I QGDNI GKISR+++A + + +L +P A TFEVKS + FS + + P +DY Sbjct: 69 LLRFVHVSSAGVTRPGRPGLDLSKQPPAVRLNKELGFILTYKLKGEDLIRESGIPYTIVRPCALSEEPAGADLIFDQGDNITGKISREEVARICIAALGSPYACNKTFEVKSTIPFSEPFTVDPSNPPPEKDY 201
BLAST of mRNA_H-paniculata_contig13802.2335.1 vs. uniprot
Match: UPI00098E195D (uncharacterized protein At2g34460, chloroplastic-like n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E195D) HSP 1 Score: 154 bits (388), Expect = 1.940e-45 Identity = 77/130 (59.23%), Postives = 97/130 (74.62%), Query Frame = 1 Query: 10 FVHVSSAGVTRPGRPDLDVEAEPPAVRMNDMLSYLLTYKLKGEDVIRNSGIPETIIRPCALTEEPPGAPIIVAQGDNIKGKISRDDIAELAVHSLLTPKAGGLTFEVKSDLAFSTVWEAEDDRRP--RDY 393 FVHVSSAGVTRPGRP LD+ +PPAVR+N L ++LTYKLKGED+IR SGIP TI+RPCAL+EEP GA +I QGDNI GKISR+++A + + +L +P A TFEVKS + FS + + P +DY Sbjct: 2 FVHVSSAGVTRPGRPGLDLSKQPPAVRLNKELGFILTYKLKGEDLIRESGIPYTIVRPCALSEEPAGADLIFDQGDNITGKISREEVARICIAALGSPYACNKTFEVKSTIPFSEPFTVDPSNPPPEKDY 131
BLAST of mRNA_H-paniculata_contig13802.2335.1 vs. uniprot
Match: A0A7S3U8L1_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3U8L1_9CHLO) HSP 1 Score: 164 bits (416), Expect = 3.590e-45 Identity = 80/133 (60.15%), Postives = 102/133 (76.69%), Query Frame = 1 Query: 4 ARFVHVSSAGVTRPGRPDLDVEAEPPAVRMNDMLSYLLTYKLKGEDVIRNSGIPETIIRPCALTEEPPGAPIIVAQGDNIKGKISRDDIAELAVHSLLTPKAGGLTFEVKSDLAFSTVWEAEDDRRP--RDYG 396 A +VHVSSAGVTRP RP +DV+AEPPAV++ND L +L+YKLKGED++R +G+P I+RPCALTEEP GA ++V QGD IKGKISR+D+AEL V L P+A TFE+KS + FST WE + P R++G Sbjct: 477 ATWVHVSSAGVTRPNRPGIDVDAEPPAVKLNDALGGILSYKLKGEDMVREAGMPFAIVRPCALTEEPAGAELLVDQGDTIKGKISREDVAELCVALLSQPEASSTTFEIKSTVPFSTPWEVDPQNPPPPREWG 609 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13802.2335.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13802.2335.1 >prot_H-paniculata_contig13802.2335.1 ID=prot_H-paniculata_contig13802.2335.1|Name=mRNA_H-paniculata_contig13802.2335.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=133bp MARFVHVSSAGVTRPGRPDLDVEAEPPAVRMNDMLSYLLTYKLKGEDVIRback to top mRNA from alignment at H-paniculata_contig13802:1948..3225+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13802.2335.1 ID=mRNA_H-paniculata_contig13802.2335.1|Name=mRNA_H-paniculata_contig13802.2335.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1278bp|location=Sequence derived from alignment at H-paniculata_contig13802:1948..3225+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13802:1948..3225+ >mRNA_H-paniculata_contig13802.2335.1 ID=mRNA_H-paniculata_contig13802.2335.1|Name=mRNA_H-paniculata_contig13802.2335.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=798bp|location=Sequence derived from alignment at H-paniculata_contig13802:1948..3225+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |