mRNA_H-paniculata_contig13753.2311.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13753.2311.1 vs. uniprot
Match: A0A7N2RFG7_QUELO (Integrase catalytic domain-containing protein n=1 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2RFG7_QUELO) HSP 1 Score: 218 bits (556), Expect = 4.530e-59 Identity = 133/380 (35.00%), Postives = 204/380 (53.68%), Query Frame = 1 Query: 13 EPKSAAEALKGPEAEKWRAAMEEEWGVLVDNGTWESEDPERLPAGRKAIRTKWIFKRILREDGSVARYKARLVAQGFPQVESEDFFKTSAPLARISTLRTVFSLAAEHDFELEGMGLDRSTTDSCLYFSRDDGGETNLLVVVYVDDLVMAGRR-EKVDEFKHNISHRFKMKDLGSLSRVLGIEVRRDRPNVTITISQGSYIREVLKRYGFDECRGVPTPAEGKVQISAPDRGRSGNSTE------FRGMVRSLMYASTGTRPDIGYAVHQAARPMS-----------------------------GRFQL---VDADWAEDVEDRKSTTG*VFKLNGGAISWCSRKKQLATWSSTEAEYVAGGEAGKETVYHRELLGSIG 1035 EP+ E L+ + KW AM++E L+ N TWE + LP G+K + KW++K DGS RYKARLV +GF Q E D+ + +P+ ++ST+R + + D + +G R TD C Y D + +++++YVDD+++AG E+++ K +S +F MKDLG+ ++LG+ + RD+ N T+ +SQ Y+++VL R+ +E + V TP ++S ++ + + + SLMYA TRPDI +AV +R MS +L VDAD+A D++ RKSTTG VF L G AISW S +++ T S+TEAEYVA EAGKE ++ L +G Sbjct: 746 EPECYDEVLQDENSSKWELAMKDEMDSLLGNQTWELTE---LPVGKKVLHNKWVYKIKNEHDGS-KRYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLWYR---KFDSFMHRIGFKRCETDHCCYVKSFDN--SYIILLLYVDDMLIAGSSIEEINNLKKQLSKQFSMKDLGAAKQILGMRIIRDKANDTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEEMDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRLGKQHWEAVKWILRYLKGSSDTCLCFTGASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWASNLQKIVTLSTTEAEYVAATEAGKEMIWLHGFLDELG 1116
BLAST of mRNA_H-paniculata_contig13753.2311.1 vs. uniprot
Match: A5AK46_VITVI (Integrase catalytic domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5AK46_VITVI) HSP 1 Score: 214 bits (544), Expect = 1.630e-57 Identity = 132/391 (33.76%), Postives = 197/391 (50.38%), Query Frame = 1 Query: 13 EPKSAAEALKGPEAEKWRAAMEEEWGVLVDNGTWESEDPERLPAGRKAIRTKWIFKRILREDGSVARYKARLVAQGFPQVESEDFFKTSAPLARISTLRTVFSLAAEHDFELEGM-------------------------------------------GLDRSTTDSCLYFSRDDGGETNLLVVVYVDDLVMAGRR-EKVDEFKHNISHRFKMKDLGSLSRVLGIEVRRDRPNVTITISQGSYIREVLKRYGFDECRGVPTPAEGKVQISAPDRGRSGNSTE------FRGMVRSLMYASTGTRPDIGYAVHQAARPMSGRFQLVDADWAEDVEDRKSTTG*VFKLNGGAISWCSRKKQLATWSSTEAEYVAGGEAGKETVYHRELLGSIG 1035 EPK EAL+ + KW AM++E L+ N TWE + LP G+KA+ KW++K DGS RYK RLV +GF Q E D+ + +P+ ++ST+R V + A + LE + G R D C Y D + +++++YV+D+++ G EK++ K +S +F MKDLG ++LG+ + RD+ N T+ +SQ Y+++VL R+ +E + V TP ++S ++ + + + SLMYA RPDI YAV VDAD+A D++ RKSTTG VF L G AISW S +++ T S+TEAEYVA EAGKE ++ L +G Sbjct: 677 EPKCYNEALQDENSSKWELAMKDEMDSLLGNQTWELTE---LPXGKKALHNKWVYKIKNEHDGS-KRYKVRLVVKGFQQKEGIDYTEIFSPVVKMSTIRVVLGMVAAENLRLEQLBVKTAFLHGDLEEDLYMIQPEXXIVQGQENLWYKKFDNFMHRIGFKRCEADHCCYVKSFDN--SYIILLLYVBDMLIXGSDIEKINNLKKQLSKQFAMKDLGXAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYAMVCIRPDIAYAVGVG---------YVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMIWLHGFLDELG 1052
BLAST of mRNA_H-paniculata_contig13753.2311.1 vs. uniprot
Match: A5AQN2_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5AQN2_VITVI) HSP 1 Score: 210 bits (535), Expect = 1.980e-56 Identity = 133/403 (33.00%), Postives = 203/403 (50.37%), Query Frame = 1 Query: 13 EPKSAAEALKGPEAEKWRAAMEEEWGVLVDNGTWESEDPERLPAGRKAIRTKWIFKRILREDGSVARYKARLVAQGFPQVESEDFFKTSAPLARISTLRTVFSLAAEHDFELE-----------------------GMGLDRSTTDSCLYFSRDDGGETNLLVVVYVDDLVMAGRR-EKVDEFKHNISHRFKMKDLGSLSRVLGIEVRRDRPNVTITISQGSYIREVLKRYGFDECRGVPTPAEGKVQISAPDRGRSGNSTE------FRGMVRSLMYASTGTRPDIGYAVHQAARPMS-----------------------------GRFQL---VDADWAEDVEDRKSTTG*VFKLNGGAISWCSRKKQLATWSSTEAEYVAGGEAGKETVYHRELLGSIG 1035 EP+ EAL+ + KW AM++E L+ N TWE + LP G+KA+ KW+++ DGS YK RLV +GF Q E D+ + +P+ ++ST+R V + A + LE G+G R D C Y D + +++++YVDD+++AG EK++ K +S +F MKDLG+ ++LG+ + RD+ N T+ +SQ Y+++VL R+ +E + V TP ++S ++ + + + SLMYA TRPDI +AV +R MS +L VD D+A D++ RKSTT VF L G ISW S +++ T S+TEAEYVA EAGKE ++ L +G Sbjct: 569 EPECYDEALQDENSSKWELAMKDEMDSLLGNQTWELTE---LPVGKKALHNKWVYRIKNEHDGS-KHYKTRLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAVENLHLEQLDVKIAFLHGDLEEDLYMIQPEGIGFKRCEVDHCCYVKSFDN--SYIILLLYVDDMLIAGSGIEKINNLKKQLSKQFVMKDLGAAKQILGMRIVRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSSKTEKERDHMSKVPYASAIGSLMYAIVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCHCFTGASLKLQGYVDVDFAGDIDSRKSTTRFVFTLGGTTISWASNLQRIVTLSTTEAEYVAPTEAGKEMIWLHGFLDELG 965
BLAST of mRNA_H-paniculata_contig13753.2311.1 vs. uniprot
Match: W8BWJ0_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BWJ0_CERCA) HSP 1 Score: 210 bits (534), Expect = 4.260e-56 Identity = 144/435 (33.10%), Postives = 207/435 (47.59%), Query Frame = 1 Query: 16 PKSAAEALKGPEAEKWRAAMEEEWGVLVDNGTWESEDPERLPAGRKAIRTKWIFKRILREDGSVARYKARLVAQGFPQVESEDFFKTSAPLARISTLRTVFSLAAEH------------------------------------------------------------DFELEGMGLDRSTTDSCLYFSRDDGGETNLLVVVYVDDLVMAGRRE-KVDEFKHNISHRFKMKDLGSLSRVLGIEVRRDRPNVTITISQGSYIREVLKRYGFDECRGVPTPAE-GKVQISAPDRGRSGNSTEFRGMVRSLMYASTGTRPDIGYAV-------------HQAA-----RPMSGRFQL--------------VDADWAEDVEDRKSTTG*VFKLNGGAISWCSRKKQLATWSSTEAEYVAGGEAGKETVYHRELLGSIGF 1038 P++ EAL+G A+ W+ +M E+ L+ N TW D LPAG K I +KW+F+ ++G + R+K+RLVA+G Q ++++T +P+ R T+R +F++AAE D L+ MG RS ++CLY + G + + VYVDDL++ E ++ K IS +F+M D GSLS LG+E++RD +++ Q +YIR +LK YG CR V TP + G + D N T+++ ++ SLMY + +RPDI +AV H+ A R +SG L DADWA D DRKS +G F L G A SW S K+ + SSTEAEYVA A KE VY R LL IG+ Sbjct: 818 PQTVTEALQGEYAQNWQESMRSEYNALLSNDTWSLVD---LPAGAKTIGSKWVFRIKRDKNGEIERFKSRLVAKGCGQQFGVNYWETFSPVIRYETIRMLFAIAAEKQLFMHQIDISNAYLNSSLDEEVYMRQPQNFISTEHPNKVLKLKKAIYGLKQSGRAWNNTLDEVLQNMGFKRSKNEACLYVKQQQQGSS--YIAVYVDDLIIISPSENEICAIKRQISSKFEMHDSGSLSYFLGLEIQRDGKQGYVSLCQKTYIRNLLKTYGMQNCRAVATPLDPGFLVCCKDDSCVKVNVTQYQSLIGSLMYLAILSRPDILHAVSKLSQRNTNPHTEHENAAKHILRYLSGTINLSIVYRKTGEPVVGFADADWANDQLDRKSYSGYTFFLAGSAFSWSSAKQSIVALSSTEAEYVALTAAAKEAVYLRRLLAEIGW 1247
BLAST of mRNA_H-paniculata_contig13753.2311.1 vs. uniprot
Match: A0A2N9F319_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9F319_FAGSY) HSP 1 Score: 209 bits (532), Expect = 9.100e-56 Identity = 132/412 (32.04%), Postives = 209/412 (50.73%), Query Frame = 1 Query: 13 EPKSAAEALKGPEAEKWRAAMEEEWGVLVDNGTWESEDPERLPAGRKAIRTKWIFKRILREDGSVARYKARLVAQGFPQVESEDFFKTSAPLARISTLRTVFSLAAEHDFELE------------------------------------------------------------GMGLDRSTTDSCLYFSRDDGGETNLLVVVYVDDLVMAG-RREKVDEFKHNISHRFKMKDLGSLSRVLGIEVRRDRPNVTITISQGSYIREVLKRYGFDECRGVPTPAEGKVQISAPDRGRSGNSTE--------FRGMVRSLMYASTGTRPDIGYAVHQAARPMSGRFQLVDADWAEDVEDRKSTTG*VFKLNGGAISWCSRKKQLATWSSTEAEYVAGGEAGKETVYHRELLGSIGFR 1041 EP + EA K EA W AM+EE L N TW D LP GRKAI KW++K + V RY+ARLV +GF Q E DF + +P+ R++T+R V ++ A D LE +G +R ++D C+Y+ R G +++++YVDD+++AG ++++ + K ++ F+MKDLG +++LG+++ RDR N I +SQ +Y++++L+R+ +C+ +PTP ++S+ N E + V SLM+A TRPDI AV + + VD+D+A D++ KST+G VF L GGA+SW S+ + + S+TEAEYVA +A KE ++ + LL +G + Sbjct: 795 EPSTFHEATKSQEAPMWMVAMQEEIEALHKNKTW---DLVPLPQGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGFAQKEGIDFNEIFSPVVRLTTVRVVLAMCATFDLYLEQLDVKTAFLHGELEEEIYMLQPEGFEEKGKENLVCKLNKSLYGLKQAPRCWYKRFDSFIMSLGYNRHSSDPCVYYKRFGDGNF-IILLLYVDDMLVAGPNKDRITDLKAQLAREFEMKDLGPANKILGMQIYRDRNNRKIWLSQKNYLKKILRRFNMQDCKPIPTPLPINFKLSSSMS--PSNEAERMEMSRVPYASAVGSLMFAMVCTRPDIAQAVGSGSDFTVRGY--VDSDYAGDLDKSKSTSGYVFTLAGGAVSWVSKLQSIVATSTTEAEYVAATQASKEAIWLQMLLEELGHK 1198
BLAST of mRNA_H-paniculata_contig13753.2311.1 vs. uniprot
Match: Q45W64_PHACR (Polyprotein n=1 Tax=Phanerochaete chrysosporium (strain RP-78 / ATCC MYA-4764 / FGSC 9002) TaxID=273507 RepID=Q45W64_PHACR) HSP 1 Score: 209 bits (531), Expect = 1.070e-55 Identity = 143/451 (31.71%), Postives = 209/451 (46.34%), Query Frame = 1 Query: 16 PKSAAEALKGPEAEKWRAAMEEEWGVLVDNGTWESEDPERLPAGRKAIRTKWIFKRILREDGSVARYKARLVAQGFPQVESEDFFKTSAPLARISTLRTVFSLAAEHDFELEG-----------------------------------------------------------MGLDRSTTDSCLYFSRDDGGETNLLVVVYVDDLVMAGRREKVDEFKHNISHRFKMKDLGSLSRVLGIEVRRDRPNVTITISQGSYIREVLKRYGFDECRGVPTPAEGKVQISAPDRGRSGNSTEFRGMVRSLMYASTGTRPDIGYAVHQ----AARPMSGRFQLV-----------------------------DADWAEDVEDRKSTTG*VFKLNGGAISWCSRKKQLATWSSTEAEYVAGGEAGKETVYHRELLGSIGFRCRGARHCLRTINQLLIS 1092 P+S E + +W+AAM+ E L NGTW+ + LP GRKAI +KW+F +DGS+ +YKARLVAQGF Q+ +D+F T +P+ R T R +LAA + + + MG RS D CLYF + G+ N+ +V+VDD + G R +D FK +++ F + G+LS +G++V R N I+I Q Y+ +L+R+G +C+ V TP + V++ ++ + + SLMYA+TGTRPDI +AV +RP + + V DADWA+ DR+S +G + L GG +SW S+K+ S+ EAEY+A A KE V+ R LL +GF GA L T NQ IS Sbjct: 832 PRSVDECKTRDDWPQWKAAMDAEMAQLEANGTWKKGE---LPPGRKAIGSKWVFAIKRHQDGSIDKYKARLVAQGFSQIAGQDYFDTFSPVVRQETFRVATALAATENLDSDALDIVGAYLHGPLEEEIYMRQAPGYDDGSGQVYVLIKALYGLKQAGRVWNHLLNHVLTSLMGWTRSEADPCLYFKHE--GKLNM-ALVHVDDTALYGERSILDRFKADVAKHFAITTNGTLSSFVGLQVTRK--NGAISILQTRYLETILERFGMQDCKPVSTPLDPGVKLEPTPEDQTPADVPYAAAIGSLMYAATGTRPDIAFAVQTLSQFTSRPSATHWTAVKHVFRYLKGTTDVGLTFARRADDDITGYSDADWAQ-AHDRRSVSGYAYLLAGGIVSWNSKKQPTVALSTMEAEYIALSHAAKEAVWLRRLLTELGFP-PGAPTVLHTDNQAAIS 1272
BLAST of mRNA_H-paniculata_contig13753.2311.1 vs. uniprot
Match: A0A6A3B678_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3B678_HIBSY) HSP 1 Score: 208 bits (529), Expect = 1.940e-55 Identity = 129/376 (34.31%), Postives = 197/376 (52.39%), Query Frame = 1 Query: 13 EPKSAAEALKGPEAEKWRAAMEEEWGVLVDNGTWESEDPERLPAGRKAIRTKWIFKRILREDGSVARYKARLVAQGFPQVESEDFFKTSAPLARISTLRTVFSLAAEHDFELEGMGLDRSTT----------------------------DSCLYFSRDDGGETNLLVVVYVDDLVMAG-RREKVDEFKHNISHRFKMKDLGSLSRVLGIEVRRDRPNVTITISQGSYIREVLKRYGFDECRGVPTPAEGKVQISAPDRGRSG------NSTEFRGMVRSLMYASTGTRPDIGYAVHQAARPMSGRFQLVDADWAEDVEDRKSTTG*VFKLNGGAISWCSRKKQLATWSSTEAEYVAGGEAGKETVYHRELLGSIG 1035 EP + EA+ +A W AM+EE L N TW D LP GRK I KW+FK +D V RY+ARLV +G+ Q E DF + +P+ R++T+R V ++ A + LE LD TT D C YF R G +++++YVDD+++AG ++ ++E K ++ FKMKDLGS +++LG+++ RDR N I +SQ +Y++++L R+ +C+ + TP ++S+ S + + V SLM+A RPDI AV +R D++ KSTTG VFK+ GGA+SW S+ + + S+ EAEYVA +A KE ++ + LL +G Sbjct: 654 EPSTYEEAINNSDASLWMMAMQEEIETLHKNNTW---DLVPLPQGRKPIGNKWVFKIKRNDDDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVVLAMCATLNLHLEQ--LDVKTTFLMEILKKRFICSNLKDLKKKKRRTWFADPCAYFKRS-GDNDFVILLLYVDDMLVAGPNKDHIEELKAQLAREFKMKDLGSANKILGMQIHRDRSNRKIWLSQKNYLKKILSRFNMQDCKSIFTPLPINFKLSSSMSPSSEKERMEMSQVPYASAVGSLMFAMICIRPDIAQAVGVVSR---------------DLDKNKSTTGYVFKVAGGAVSWVSKLQSVMATSTIEAEYVAATQASKEAIWLKMLLEELG 1008
BLAST of mRNA_H-paniculata_contig13753.2311.1 vs. uniprot
Match: A0A445HPU2_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445HPU2_GLYSO) HSP 1 Score: 207 bits (528), Expect = 2.530e-55 Identity = 141/433 (32.56%), Postives = 214/433 (49.42%), Query Frame = 1 Query: 13 EPKSAAEALKGPEAEKWRAAMEEEWGVLVDNGTWESEDPERLPAGRKAIRTKWIFKRILREDGSVARYKARLVAQGFPQVESEDFFKTSAPLARISTLRTVFSLAAEHDFELEGM------------------------------------------------------------GLDRSTTDSCLYFSRDDGGETNLLVVVYVDDLVMAGR-REKVDEFKHNISHRFKMKDLGSLSRVLGIEVRRDRPNVTITISQGSYIREVLKRYGFDECRGVPTPAEGKVQISAPDRGRSGNSTEFRGMVRSLMYASTGTRPDIGYAVHQAAR----PMSGRFQLV----------------------------DADWAEDVEDRKSTTG*VFKLNGGAISWCSRKKQLATWSSTEAEYVAGGEAGKETVYHRELLGSI 1032 +PK+ +EA+ + W+ A++ E ++ N TW+ D LP G K + K IF+R ++ DG+V +YKARLV QGF Q E DFF T AP+ARIST+R + +LAA H+ + M G + D CLY D G+ +++ +YVDD+++ G +++VDE K +S +F MKD+G +LGI+++R N I+ISQ YI ++L+++ F +C V TP + +++ P++G + + E+ + SLMYA TRPDI YAV + +R P S +Q + DA W ++ED ST+G VF L GGAISW S+K+ T S+ E+E+VA AGKE + R L+ I Sbjct: 537 DPKTFSEAMASRDVVFWKEAIQSEMDSIMQNNTWKLVD---LPPGCKPLGCKMIFRRKMKVDGTVDKYKARLVIQGFRQKEGIDFFDTYAPVARISTIRLLLALAAIHNLMIHQMDVKTAFLNGELDEEIYMKQPEGFVMPGNENKVCKLMKSLYGLKQAPKQWHQKFDEVVLSSGFVINQADKCLYSKFDTHGK-GVIICLYVDDMLIFGTDQDQVDETKAFLSSKFDMKDMGEADVILGIKIKRG--NNGISISQSHYIEKILEKFNFKDCSPVSTPIDPNLKL-LPNKGVAVSQLEYSRAIGSLMYAMISTRPDIAYAVAKLSRFTSNPSSHHWQAMNRVFKYLKGTIDYGLTYTGFPSVIEGYSDASWITNMEDYSSTSGWVFLLGGGAISWASKKQTCITNSTMESEFVALAAAGKEAEWLRNLIYEI 962
BLAST of mRNA_H-paniculata_contig13753.2311.1 vs. uniprot
Match: A0A6A2Z3I3_HIBSY (Protein STRUBBELIG-RECEPTOR FAMILY 1 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2Z3I3_HIBSY) HSP 1 Score: 207 bits (527), Expect = 3.700e-55 Identity = 128/394 (32.49%), Postives = 204/394 (51.78%), Query Frame = 1 Query: 13 EPKSAAEALKGPEAEKWRAAMEEEWGVLVDNGTWESEDPERLPAGRKAIRTKWIFKRILREDGSVARYKARLVAQGFPQVESEDFFKTSAPLARISTLRTVFSLAAEHDFELEGMGLDRS--------------TTDSCLYFSRDDGGETNLLVVVYVDDLVMAG-RREKVDEFKHNISHRFKMKDLGSLSRVLGIEVRRDRPNVTITISQGSYIREVLKRYGFDECRGVPTPAEGKVQISAP------DRGRSGNSTEFRGMVRSLMYASTGTRPDIGYAVHQAARPM----------------------------SGRFQL----VDADWAEDVEDRKSTTG*VFKLNGGAISWCSRKKQLATWSSTEAEYVAGGEAGKETVYHRELLGSIG 1035 EP + EA+ + W AM+EE L N TW D LP G K I KW+FK D V RY+ARLV +G+ Q E DF + +P+ R++T+R + ++ A + LE + + + D C YF R G +++++YVDD+++AG ++ ++E K ++ F+MKDLGS +++LG+++ RDR N I +SQ +Y++++L R+ +C+ + TP ++S+ + + + V SLM+A TRPDI AV +R M G L VD+D+A D++ KSTTG VFK+ GGA+SW S+ + + S+TEAEYV+ +A KE ++ + LL +G Sbjct: 753 EPSTYQEAINSSDDSLWMMAMQEEIEALHKNNTW---DLVPLPQGMKPIGNKWVFKIKRNVDDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVLLAMCATLNLHLEQLDVKTAFLHGNLEEKIYMLQPEDPCAYFKRS-GDNDFVILLLYVDDMLVAGPNKDHIEELKVQLAREFEMKDLGSANKILGMQIHRDRSNRKIWLSQKNYLKKILSRFSMQDCKQISTPLPINFKLSSSMSPSNEEERMEMSRVPYASAVGSLMFAMICTRPDIAQAVGVVSRYMVNPGKEHWNTVKRIMRYIKGTSNVALCYGGSNLLINGYVDSDYAGDLDKSKSTTGYVFKIAGGAVSWVSKLQSVVATSTTEAEYVSATQASKEAIWLKMLLEELG 1142
BLAST of mRNA_H-paniculata_contig13753.2311.1 vs. uniprot
Match: A0A438CBM2_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CBM2_VITVI) HSP 1 Score: 206 bits (523), Expect = 6.920e-55 Identity = 133/397 (33.50%), Postives = 208/397 (52.39%), Query Frame = 1 Query: 13 EPKSAAEALKGPEAEKWRAAMEEEWGVLVDNGTWESEDPERLPAGRKAIRTKWIFKRILREDGSVARYKARLVAQGFPQVESEDFFKTSAPLARISTLRTVFSLAAEHDFELEGMGLDRS----TTDSCLYFSRDDG----GETNLLVVVY-----VDDLVMAGRR-EKVDEFKHNISHRFKMKDLGSLSRVLGIEVRRDRPNVTITISQGSYIREVLKRYGFDECRGVPTPAEGKVQISAPDRGRSGNSTE------FRGMVRSLMYASTGTRPDIGYAVHQAARPMS-----------------------------GRFQL---VDADWAEDVEDRKSTTG*VFKLNGGAISWCSRKKQLATWSSTEAEYVAGGEAGKETVYHRELLGSIGFRCR 1047 +P+ EAL+ + KW AM++E L+ N TWE + LP G+KA+ KW+++ DGS RYKA+LV +GF Q E D+ + +P+ ++ST+R V + A + LE + + + + LY + +G G+ NL+ + ++ L+ +G EK++ K +S +F MKDLG+ ++LG+ + RD+ N T+ +SQ Y+++VL R+ +E + V TP ++S ++ + + + SLMYA TRPDI +AV +R MS +L VDAD+A D++ RKSTTG VF L G AISW S +++ T S+TEAEYVA EAGKE ++ L +G R R Sbjct: 556 QPECYDEALQDENSSKWELAMKDEMDSLLGNQTWELTE---LPVGKKALHNKWVYRIKNEHDGS-KRYKAKLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLNKLLDSGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIDSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLCFTGANLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMIWLHGFLDELGMRDR 948 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13753.2311.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13753.2311.1 >prot_H-paniculata_contig13753.2311.1 ID=prot_H-paniculata_contig13753.2311.1|Name=mRNA_H-paniculata_contig13753.2311.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=272bp MEEEWGVLVDNGTWESEDPERLPAGRKAIRTKWIFKRILREDGSVARYKAback to top mRNA from alignment at H-paniculata_contig13753:4989..6608+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13753.2311.1 ID=mRNA_H-paniculata_contig13753.2311.1|Name=mRNA_H-paniculata_contig13753.2311.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1620bp|location=Sequence derived from alignment at H-paniculata_contig13753:4989..6608+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13753:4989..6608+ >mRNA_H-paniculata_contig13753.2311.1 ID=mRNA_H-paniculata_contig13753.2311.1|Name=mRNA_H-paniculata_contig13753.2311.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1632bp|location=Sequence derived from alignment at H-paniculata_contig13753:4989..6608+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |