mRNA_H-paniculata_contig13753.2311.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig13753.2311.1
Unique NamemRNA_H-paniculata_contig13753.2311.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig13753.2311.1 vs. uniprot
Match: A0A7N2RFG7_QUELO (Integrase catalytic domain-containing protein n=1 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2RFG7_QUELO)

HSP 1 Score: 218 bits (556), Expect = 4.530e-59
Identity = 133/380 (35.00%), Postives = 204/380 (53.68%), Query Frame = 1
Query:   13 EPKSAAEALKGPEAEKWRAAMEEEWGVLVDNGTWESEDPERLPAGRKAIRTKWIFKRILREDGSVARYKARLVAQGFPQVESEDFFKTSAPLARISTLRTVFSLAAEHDFELEGMGLDRSTTDSCLYFSRDDGGETNLLVVVYVDDLVMAGRR-EKVDEFKHNISHRFKMKDLGSLSRVLGIEVRRDRPNVTITISQGSYIREVLKRYGFDECRGVPTPAEGKVQISAPDRGRSGNSTE------FRGMVRSLMYASTGTRPDIGYAVHQAARPMS-----------------------------GRFQL---VDADWAEDVEDRKSTTG*VFKLNGGAISWCSRKKQLATWSSTEAEYVAGGEAGKETVYHRELLGSIG 1035
            EP+   E L+   + KW  AM++E   L+ N TWE  +   LP G+K +  KW++K     DGS  RYKARLV +GF Q E  D+ +  +P+ ++ST+R  +    + D  +  +G  R  TD C Y    D   + +++++YVDD+++AG   E+++  K  +S +F MKDLG+  ++LG+ + RD+ N T+ +SQ  Y+++VL R+  +E + V TP     ++S     ++    +      +   + SLMYA   TRPDI +AV   +R MS                                +L   VDAD+A D++ RKSTTG VF L G AISW S  +++ T S+TEAEYVA  EAGKE ++    L  +G
Sbjct:  746 EPECYDEVLQDENSSKWELAMKDEMDSLLGNQTWELTE---LPVGKKVLHNKWVYKIKNEHDGS-KRYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLWYR---KFDSFMHRIGFKRCETDHCCYVKSFDN--SYIILLLYVDDMLIAGSSIEEINNLKKQLSKQFSMKDLGAAKQILGMRIIRDKANDTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEEMDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRLGKQHWEAVKWILRYLKGSSDTCLCFTGASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWASNLQKIVTLSTTEAEYVAATEAGKEMIWLHGFLDELG 1116          
BLAST of mRNA_H-paniculata_contig13753.2311.1 vs. uniprot
Match: A5AK46_VITVI (Integrase catalytic domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5AK46_VITVI)

HSP 1 Score: 214 bits (544), Expect = 1.630e-57
Identity = 132/391 (33.76%), Postives = 197/391 (50.38%), Query Frame = 1
Query:   13 EPKSAAEALKGPEAEKWRAAMEEEWGVLVDNGTWESEDPERLPAGRKAIRTKWIFKRILREDGSVARYKARLVAQGFPQVESEDFFKTSAPLARISTLRTVFSLAAEHDFELEGM-------------------------------------------GLDRSTTDSCLYFSRDDGGETNLLVVVYVDDLVMAGRR-EKVDEFKHNISHRFKMKDLGSLSRVLGIEVRRDRPNVTITISQGSYIREVLKRYGFDECRGVPTPAEGKVQISAPDRGRSGNSTE------FRGMVRSLMYASTGTRPDIGYAVHQAARPMSGRFQLVDADWAEDVEDRKSTTG*VFKLNGGAISWCSRKKQLATWSSTEAEYVAGGEAGKETVYHRELLGSIG 1035
            EPK   EAL+   + KW  AM++E   L+ N TWE  +   LP G+KA+  KW++K     DGS  RYK RLV +GF Q E  D+ +  +P+ ++ST+R V  + A  +  LE +                                           G  R   D C Y    D   + +++++YV+D+++ G   EK++  K  +S +F MKDLG   ++LG+ + RD+ N T+ +SQ  Y+++VL R+  +E + V TP     ++S     ++    +      +   + SLMYA    RPDI YAV             VDAD+A D++ RKSTTG VF L G AISW S  +++ T S+TEAEYVA  EAGKE ++    L  +G
Sbjct:  677 EPKCYNEALQDENSSKWELAMKDEMDSLLGNQTWELTE---LPXGKKALHNKWVYKIKNEHDGS-KRYKVRLVVKGFQQKEGIDYTEIFSPVVKMSTIRVVLGMVAAENLRLEQLBVKTAFLHGDLEEDLYMIQPEXXIVQGQENLWYKKFDNFMHRIGFKRCEADHCCYVKSFDN--SYIILLLYVBDMLIXGSDIEKINNLKKQLSKQFAMKDLGXAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYAMVCIRPDIAYAVGVG---------YVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMIWLHGFLDELG 1052          
BLAST of mRNA_H-paniculata_contig13753.2311.1 vs. uniprot
Match: A5AQN2_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5AQN2_VITVI)

HSP 1 Score: 210 bits (535), Expect = 1.980e-56
Identity = 133/403 (33.00%), Postives = 203/403 (50.37%), Query Frame = 1
Query:   13 EPKSAAEALKGPEAEKWRAAMEEEWGVLVDNGTWESEDPERLPAGRKAIRTKWIFKRILREDGSVARYKARLVAQGFPQVESEDFFKTSAPLARISTLRTVFSLAAEHDFELE-----------------------GMGLDRSTTDSCLYFSRDDGGETNLLVVVYVDDLVMAGRR-EKVDEFKHNISHRFKMKDLGSLSRVLGIEVRRDRPNVTITISQGSYIREVLKRYGFDECRGVPTPAEGKVQISAPDRGRSGNSTE------FRGMVRSLMYASTGTRPDIGYAVHQAARPMS-----------------------------GRFQL---VDADWAEDVEDRKSTTG*VFKLNGGAISWCSRKKQLATWSSTEAEYVAGGEAGKETVYHRELLGSIG 1035
            EP+   EAL+   + KW  AM++E   L+ N TWE  +   LP G+KA+  KW+++     DGS   YK RLV +GF Q E  D+ +  +P+ ++ST+R V  + A  +  LE                       G+G  R   D C Y    D   + +++++YVDD+++AG   EK++  K  +S +F MKDLG+  ++LG+ + RD+ N T+ +SQ  Y+++VL R+  +E + V TP     ++S     ++    +      +   + SLMYA   TRPDI +AV   +R MS                                +L   VD D+A D++ RKSTT  VF L G  ISW S  +++ T S+TEAEYVA  EAGKE ++    L  +G
Sbjct:  569 EPECYDEALQDENSSKWELAMKDEMDSLLGNQTWELTE---LPVGKKALHNKWVYRIKNEHDGS-KHYKTRLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAVENLHLEQLDVKIAFLHGDLEEDLYMIQPEGIGFKRCEVDHCCYVKSFDN--SYIILLLYVDDMLIAGSGIEKINNLKKQLSKQFVMKDLGAAKQILGMRIVRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSSKTEKERDHMSKVPYASAIGSLMYAIVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCHCFTGASLKLQGYVDVDFAGDIDSRKSTTRFVFTLGGTTISWASNLQRIVTLSTTEAEYVAPTEAGKEMIWLHGFLDELG 965          
BLAST of mRNA_H-paniculata_contig13753.2311.1 vs. uniprot
Match: W8BWJ0_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BWJ0_CERCA)

HSP 1 Score: 210 bits (534), Expect = 4.260e-56
Identity = 144/435 (33.10%), Postives = 207/435 (47.59%), Query Frame = 1
Query:   16 PKSAAEALKGPEAEKWRAAMEEEWGVLVDNGTWESEDPERLPAGRKAIRTKWIFKRILREDGSVARYKARLVAQGFPQVESEDFFKTSAPLARISTLRTVFSLAAEH------------------------------------------------------------DFELEGMGLDRSTTDSCLYFSRDDGGETNLLVVVYVDDLVMAGRRE-KVDEFKHNISHRFKMKDLGSLSRVLGIEVRRDRPNVTITISQGSYIREVLKRYGFDECRGVPTPAE-GKVQISAPDRGRSGNSTEFRGMVRSLMYASTGTRPDIGYAV-------------HQAA-----RPMSGRFQL--------------VDADWAEDVEDRKSTTG*VFKLNGGAISWCSRKKQLATWSSTEAEYVAGGEAGKETVYHRELLGSIGF 1038
            P++  EAL+G  A+ W+ +M  E+  L+ N TW   D   LPAG K I +KW+F+    ++G + R+K+RLVA+G  Q    ++++T +P+ R  T+R +F++AAE                                                             D  L+ MG  RS  ++CLY  +   G +   + VYVDDL++    E ++   K  IS +F+M D GSLS  LG+E++RD     +++ Q +YIR +LK YG   CR V TP + G +     D     N T+++ ++ SLMY +  +RPDI +AV             H+ A     R +SG   L               DADWA D  DRKS +G  F L G A SW S K+ +   SSTEAEYVA   A KE VY R LL  IG+
Sbjct:  818 PQTVTEALQGEYAQNWQESMRSEYNALLSNDTWSLVD---LPAGAKTIGSKWVFRIKRDKNGEIERFKSRLVAKGCGQQFGVNYWETFSPVIRYETIRMLFAIAAEKQLFMHQIDISNAYLNSSLDEEVYMRQPQNFISTEHPNKVLKLKKAIYGLKQSGRAWNNTLDEVLQNMGFKRSKNEACLYVKQQQQGSS--YIAVYVDDLIIISPSENEICAIKRQISSKFEMHDSGSLSYFLGLEIQRDGKQGYVSLCQKTYIRNLLKTYGMQNCRAVATPLDPGFLVCCKDDSCVKVNVTQYQSLIGSLMYLAILSRPDILHAVSKLSQRNTNPHTEHENAAKHILRYLSGTINLSIVYRKTGEPVVGFADADWANDQLDRKSYSGYTFFLAGSAFSWSSAKQSIVALSSTEAEYVALTAAAKEAVYLRRLLAEIGW 1247          
BLAST of mRNA_H-paniculata_contig13753.2311.1 vs. uniprot
Match: A0A2N9F319_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9F319_FAGSY)

HSP 1 Score: 209 bits (532), Expect = 9.100e-56
Identity = 132/412 (32.04%), Postives = 209/412 (50.73%), Query Frame = 1
Query:   13 EPKSAAEALKGPEAEKWRAAMEEEWGVLVDNGTWESEDPERLPAGRKAIRTKWIFKRILREDGSVARYKARLVAQGFPQVESEDFFKTSAPLARISTLRTVFSLAAEHDFELE------------------------------------------------------------GMGLDRSTTDSCLYFSRDDGGETNLLVVVYVDDLVMAG-RREKVDEFKHNISHRFKMKDLGSLSRVLGIEVRRDRPNVTITISQGSYIREVLKRYGFDECRGVPTPAEGKVQISAPDRGRSGNSTE--------FRGMVRSLMYASTGTRPDIGYAVHQAARPMSGRFQLVDADWAEDVEDRKSTTG*VFKLNGGAISWCSRKKQLATWSSTEAEYVAGGEAGKETVYHRELLGSIGFR 1041
            EP +  EA K  EA  W  AM+EE   L  N TW   D   LP GRKAI  KW++K     +  V RY+ARLV +GF Q E  DF +  +P+ R++T+R V ++ A  D  LE                                                             +G +R ++D C+Y+ R   G   +++++YVDD+++AG  ++++ + K  ++  F+MKDLG  +++LG+++ RDR N  I +SQ +Y++++L+R+   +C+ +PTP     ++S+       N  E        +   V SLM+A   TRPDI  AV   +      +  VD+D+A D++  KST+G VF L GGA+SW S+ + +   S+TEAEYVA  +A KE ++ + LL  +G +
Sbjct:  795 EPSTFHEATKSQEAPMWMVAMQEEIEALHKNKTW---DLVPLPQGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGFAQKEGIDFNEIFSPVVRLTTVRVVLAMCATFDLYLEQLDVKTAFLHGELEEEIYMLQPEGFEEKGKENLVCKLNKSLYGLKQAPRCWYKRFDSFIMSLGYNRHSSDPCVYYKRFGDGNF-IILLLYVDDMLVAGPNKDRITDLKAQLAREFEMKDLGPANKILGMQIYRDRNNRKIWLSQKNYLKKILRRFNMQDCKPIPTPLPINFKLSSSMS--PSNEAERMEMSRVPYASAVGSLMFAMVCTRPDIAQAVGSGSDFTVRGY--VDSDYAGDLDKSKSTSGYVFTLAGGAVSWVSKLQSIVATSTTEAEYVAATQASKEAIWLQMLLEELGHK 1198          
BLAST of mRNA_H-paniculata_contig13753.2311.1 vs. uniprot
Match: Q45W64_PHACR (Polyprotein n=1 Tax=Phanerochaete chrysosporium (strain RP-78 / ATCC MYA-4764 / FGSC 9002) TaxID=273507 RepID=Q45W64_PHACR)

HSP 1 Score: 209 bits (531), Expect = 1.070e-55
Identity = 143/451 (31.71%), Postives = 209/451 (46.34%), Query Frame = 1
Query:   16 PKSAAEALKGPEAEKWRAAMEEEWGVLVDNGTWESEDPERLPAGRKAIRTKWIFKRILREDGSVARYKARLVAQGFPQVESEDFFKTSAPLARISTLRTVFSLAAEHDFELEG-----------------------------------------------------------MGLDRSTTDSCLYFSRDDGGETNLLVVVYVDDLVMAGRREKVDEFKHNISHRFKMKDLGSLSRVLGIEVRRDRPNVTITISQGSYIREVLKRYGFDECRGVPTPAEGKVQISAPDRGRSGNSTEFRGMVRSLMYASTGTRPDIGYAVHQ----AARPMSGRFQLV-----------------------------DADWAEDVEDRKSTTG*VFKLNGGAISWCSRKKQLATWSSTEAEYVAGGEAGKETVYHRELLGSIGFRCRGARHCLRTINQLLIS 1092
            P+S  E     +  +W+AAM+ E   L  NGTW+  +   LP GRKAI +KW+F     +DGS+ +YKARLVAQGF Q+  +D+F T +P+ R  T R   +LAA  + + +                                                            MG  RS  D CLYF  +  G+ N+  +V+VDD  + G R  +D FK +++  F +   G+LS  +G++V R   N  I+I Q  Y+  +L+R+G  +C+ V TP +  V++      ++     +   + SLMYA+TGTRPDI +AV       +RP +  +  V                             DADWA+   DR+S +G  + L GG +SW S+K+     S+ EAEY+A   A KE V+ R LL  +GF   GA   L T NQ  IS
Sbjct:  832 PRSVDECKTRDDWPQWKAAMDAEMAQLEANGTWKKGE---LPPGRKAIGSKWVFAIKRHQDGSIDKYKARLVAQGFSQIAGQDYFDTFSPVVRQETFRVATALAATENLDSDALDIVGAYLHGPLEEEIYMRQAPGYDDGSGQVYVLIKALYGLKQAGRVWNHLLNHVLTSLMGWTRSEADPCLYFKHE--GKLNM-ALVHVDDTALYGERSILDRFKADVAKHFAITTNGTLSSFVGLQVTRK--NGAISILQTRYLETILERFGMQDCKPVSTPLDPGVKLEPTPEDQTPADVPYAAAIGSLMYAATGTRPDIAFAVQTLSQFTSRPSATHWTAVKHVFRYLKGTTDVGLTFARRADDDITGYSDADWAQ-AHDRRSVSGYAYLLAGGIVSWNSKKQPTVALSTMEAEYIALSHAAKEAVWLRRLLTELGFP-PGAPTVLHTDNQAAIS 1272          
BLAST of mRNA_H-paniculata_contig13753.2311.1 vs. uniprot
Match: A0A6A3B678_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3B678_HIBSY)

HSP 1 Score: 208 bits (529), Expect = 1.940e-55
Identity = 129/376 (34.31%), Postives = 197/376 (52.39%), Query Frame = 1
Query:   13 EPKSAAEALKGPEAEKWRAAMEEEWGVLVDNGTWESEDPERLPAGRKAIRTKWIFKRILREDGSVARYKARLVAQGFPQVESEDFFKTSAPLARISTLRTVFSLAAEHDFELEGMGLDRSTT----------------------------DSCLYFSRDDGGETNLLVVVYVDDLVMAG-RREKVDEFKHNISHRFKMKDLGSLSRVLGIEVRRDRPNVTITISQGSYIREVLKRYGFDECRGVPTPAEGKVQISAPDRGRSG------NSTEFRGMVRSLMYASTGTRPDIGYAVHQAARPMSGRFQLVDADWAEDVEDRKSTTG*VFKLNGGAISWCSRKKQLATWSSTEAEYVAGGEAGKETVYHRELLGSIG 1035
            EP +  EA+   +A  W  AM+EE   L  N TW   D   LP GRK I  KW+FK    +D  V RY+ARLV +G+ Q E  DF +  +P+ R++T+R V ++ A  +  LE   LD  TT                            D C YF R  G    +++++YVDD+++AG  ++ ++E K  ++  FKMKDLGS +++LG+++ RDR N  I +SQ +Y++++L R+   +C+ + TP     ++S+     S       +   +   V SLM+A    RPDI  AV   +R               D++  KSTTG VFK+ GGA+SW S+ + +   S+ EAEYVA  +A KE ++ + LL  +G
Sbjct:  654 EPSTYEEAINNSDASLWMMAMQEEIETLHKNNTW---DLVPLPQGRKPIGNKWVFKIKRNDDDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVVLAMCATLNLHLEQ--LDVKTTFLMEILKKRFICSNLKDLKKKKRRTWFADPCAYFKRS-GDNDFVILLLYVDDMLVAGPNKDHIEELKAQLAREFKMKDLGSANKILGMQIHRDRSNRKIWLSQKNYLKKILSRFNMQDCKSIFTPLPINFKLSSSMSPSSEKERMEMSQVPYASAVGSLMFAMICIRPDIAQAVGVVSR---------------DLDKNKSTTGYVFKVAGGAVSWVSKLQSVMATSTIEAEYVAATQASKEAIWLKMLLEELG 1008          
BLAST of mRNA_H-paniculata_contig13753.2311.1 vs. uniprot
Match: A0A445HPU2_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445HPU2_GLYSO)

HSP 1 Score: 207 bits (528), Expect = 2.530e-55
Identity = 141/433 (32.56%), Postives = 214/433 (49.42%), Query Frame = 1
Query:   13 EPKSAAEALKGPEAEKWRAAMEEEWGVLVDNGTWESEDPERLPAGRKAIRTKWIFKRILREDGSVARYKARLVAQGFPQVESEDFFKTSAPLARISTLRTVFSLAAEHDFELEGM------------------------------------------------------------GLDRSTTDSCLYFSRDDGGETNLLVVVYVDDLVMAGR-REKVDEFKHNISHRFKMKDLGSLSRVLGIEVRRDRPNVTITISQGSYIREVLKRYGFDECRGVPTPAEGKVQISAPDRGRSGNSTEFRGMVRSLMYASTGTRPDIGYAVHQAAR----PMSGRFQLV----------------------------DADWAEDVEDRKSTTG*VFKLNGGAISWCSRKKQLATWSSTEAEYVAGGEAGKETVYHRELLGSI 1032
            +PK+ +EA+   +   W+ A++ E   ++ N TW+  D   LP G K +  K IF+R ++ DG+V +YKARLV QGF Q E  DFF T AP+ARIST+R + +LAA H+  +  M                                                            G   +  D CLY   D  G+  +++ +YVDD+++ G  +++VDE K  +S +F MKD+G    +LGI+++R   N  I+ISQ  YI ++L+++ F +C  V TP +  +++  P++G + +  E+   + SLMYA   TRPDI YAV + +R    P S  +Q +                            DA W  ++ED  ST+G VF L GGAISW S+K+   T S+ E+E+VA   AGKE  + R L+  I
Sbjct:  537 DPKTFSEAMASRDVVFWKEAIQSEMDSIMQNNTWKLVD---LPPGCKPLGCKMIFRRKMKVDGTVDKYKARLVIQGFRQKEGIDFFDTYAPVARISTIRLLLALAAIHNLMIHQMDVKTAFLNGELDEEIYMKQPEGFVMPGNENKVCKLMKSLYGLKQAPKQWHQKFDEVVLSSGFVINQADKCLYSKFDTHGK-GVIICLYVDDMLIFGTDQDQVDETKAFLSSKFDMKDMGEADVILGIKIKRG--NNGISISQSHYIEKILEKFNFKDCSPVSTPIDPNLKL-LPNKGVAVSQLEYSRAIGSLMYAMISTRPDIAYAVAKLSRFTSNPSSHHWQAMNRVFKYLKGTIDYGLTYTGFPSVIEGYSDASWITNMEDYSSTSGWVFLLGGGAISWASKKQTCITNSTMESEFVALAAAGKEAEWLRNLIYEI 962          
BLAST of mRNA_H-paniculata_contig13753.2311.1 vs. uniprot
Match: A0A6A2Z3I3_HIBSY (Protein STRUBBELIG-RECEPTOR FAMILY 1 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2Z3I3_HIBSY)

HSP 1 Score: 207 bits (527), Expect = 3.700e-55
Identity = 128/394 (32.49%), Postives = 204/394 (51.78%), Query Frame = 1
Query:   13 EPKSAAEALKGPEAEKWRAAMEEEWGVLVDNGTWESEDPERLPAGRKAIRTKWIFKRILREDGSVARYKARLVAQGFPQVESEDFFKTSAPLARISTLRTVFSLAAEHDFELEGMGLDRS--------------TTDSCLYFSRDDGGETNLLVVVYVDDLVMAG-RREKVDEFKHNISHRFKMKDLGSLSRVLGIEVRRDRPNVTITISQGSYIREVLKRYGFDECRGVPTPAEGKVQISAP------DRGRSGNSTEFRGMVRSLMYASTGTRPDIGYAVHQAARPM----------------------------SGRFQL----VDADWAEDVEDRKSTTG*VFKLNGGAISWCSRKKQLATWSSTEAEYVAGGEAGKETVYHRELLGSIG 1035
            EP +  EA+   +   W  AM+EE   L  N TW   D   LP G K I  KW+FK     D  V RY+ARLV +G+ Q E  DF +  +P+ R++T+R + ++ A  +  LE + +  +                D C YF R  G    +++++YVDD+++AG  ++ ++E K  ++  F+MKDLGS +++LG+++ RDR N  I +SQ +Y++++L R+   +C+ + TP     ++S+       +     +   +   V SLM+A   TRPDI  AV   +R M                             G   L    VD+D+A D++  KSTTG VFK+ GGA+SW S+ + +   S+TEAEYV+  +A KE ++ + LL  +G
Sbjct:  753 EPSTYQEAINSSDDSLWMMAMQEEIEALHKNNTW---DLVPLPQGMKPIGNKWVFKIKRNVDDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVLLAMCATLNLHLEQLDVKTAFLHGNLEEKIYMLQPEDPCAYFKRS-GDNDFVILLLYVDDMLVAGPNKDHIEELKVQLAREFEMKDLGSANKILGMQIHRDRSNRKIWLSQKNYLKKILSRFSMQDCKQISTPLPINFKLSSSMSPSNEEERMEMSRVPYASAVGSLMFAMICTRPDIAQAVGVVSRYMVNPGKEHWNTVKRIMRYIKGTSNVALCYGGSNLLINGYVDSDYAGDLDKSKSTTGYVFKIAGGAVSWVSKLQSVVATSTTEAEYVSATQASKEAIWLKMLLEELG 1142          
BLAST of mRNA_H-paniculata_contig13753.2311.1 vs. uniprot
Match: A0A438CBM2_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CBM2_VITVI)

HSP 1 Score: 206 bits (523), Expect = 6.920e-55
Identity = 133/397 (33.50%), Postives = 208/397 (52.39%), Query Frame = 1
Query:   13 EPKSAAEALKGPEAEKWRAAMEEEWGVLVDNGTWESEDPERLPAGRKAIRTKWIFKRILREDGSVARYKARLVAQGFPQVESEDFFKTSAPLARISTLRTVFSLAAEHDFELEGMGLDRS----TTDSCLYFSRDDG----GETNLLVVVY-----VDDLVMAGRR-EKVDEFKHNISHRFKMKDLGSLSRVLGIEVRRDRPNVTITISQGSYIREVLKRYGFDECRGVPTPAEGKVQISAPDRGRSGNSTE------FRGMVRSLMYASTGTRPDIGYAVHQAARPMS-----------------------------GRFQL---VDADWAEDVEDRKSTTG*VFKLNGGAISWCSRKKQLATWSSTEAEYVAGGEAGKETVYHRELLGSIGFRCR 1047
            +P+   EAL+   + KW  AM++E   L+ N TWE  +   LP G+KA+  KW+++     DGS  RYKA+LV +GF Q E  D+ +  +P+ ++ST+R V  + A  +  LE + +  +      +  LY  + +G    G+ NL+  +      ++ L+ +G   EK++  K  +S +F MKDLG+  ++LG+ + RD+ N T+ +SQ  Y+++VL R+  +E + V TP     ++S     ++    +      +   + SLMYA   TRPDI +AV   +R MS                                +L   VDAD+A D++ RKSTTG VF L G AISW S  +++ T S+TEAEYVA  EAGKE ++    L  +G R R
Sbjct:  556 QPECYDEALQDENSSKWELAMKDEMDSLLGNQTWELTE---LPVGKKALHNKWVYRIKNEHDGS-KRYKAKLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLNKLLDSGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIDSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLCFTGANLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMIWLHGFLDELGMRDR 948          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13753.2311.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7N2RFG7_QUELO4.530e-5935.00Integrase catalytic domain-containing protein n=1 ... [more]
A5AK46_VITVI1.630e-5733.76Integrase catalytic domain-containing protein n=1 ... [more]
A5AQN2_VITVI1.980e-5633.00Uncharacterized protein n=1 Tax=Vitis vinifera Tax... [more]
W8BWJ0_CERCA4.260e-5633.10Retrovirus-related Pol polyprotein from transposon... [more]
A0A2N9F319_FAGSY9.100e-5632.04Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13753contigH-paniculata_contig13753:4989..6608 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score162.2
Seed ortholog evalue3.5e-37
Seed eggNOG ortholog7029.ACYPI24114-PA
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs38DPC@33154,3BI7U@33208,3CTS1@33213,3SQRW@50557,41WYJ@6656,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelInsecta
Best eggNOG OGNA|NA|NA
Exons4
Model size1271
Cds size816
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13753.2311.1prot_H-paniculata_contig13753.2311.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig13753 5061..6225 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929092.9465334-UTR-H-paniculata_contig13753:4988..50601622929092.9465334-UTR-H-paniculata_contig13753:4988..5060Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13753 4989..5060 +
1691480728.7290926-UTR-H-paniculata_contig13753:4988..50601691480728.7290926-UTR-H-paniculata_contig13753:4988..5060Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13753 4989..5060 +
1622929093.0082786-UTR-H-paniculata_contig13753:6225..66081622929093.0082786-UTR-H-paniculata_contig13753:6225..6608Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13753 6226..6608 +
1691480728.7782483-UTR-H-paniculata_contig13753:6225..66081691480728.7782483-UTR-H-paniculata_contig13753:6225..6608Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig13753 6226..6608 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929092.9601908-CDS-H-paniculata_contig13753:5060..53461622929092.9601908-CDS-H-paniculata_contig13753:5060..5346Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13753 5061..5346 +
1691480728.7402282-CDS-H-paniculata_contig13753:5060..53461691480728.7402282-CDS-H-paniculata_contig13753:5060..5346Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13753 5061..5346 +
1622929092.9700308-CDS-H-paniculata_contig13753:5526..58661622929092.9700308-CDS-H-paniculata_contig13753:5526..5866Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13753 5527..5866 +
1691480728.7508461-CDS-H-paniculata_contig13753:5526..58661691480728.7508461-CDS-H-paniculata_contig13753:5526..5866Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13753 5527..5866 +
1622929092.9818501-CDS-H-paniculata_contig13753:5944..60761622929092.9818501-CDS-H-paniculata_contig13753:5944..6076Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13753 5945..6076 +
1691480728.7602692-CDS-H-paniculata_contig13753:5944..60761691480728.7602692-CDS-H-paniculata_contig13753:5944..6076Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13753 5945..6076 +
1622929092.997359-CDS-H-paniculata_contig13753:6167..62251622929092.997359-CDS-H-paniculata_contig13753:6167..6225Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13753 6168..6225 +
1691480728.769515-CDS-H-paniculata_contig13753:6167..62251691480728.769515-CDS-H-paniculata_contig13753:6167..6225Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig13753 6168..6225 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig13753.2311.1

>prot_H-paniculata_contig13753.2311.1 ID=prot_H-paniculata_contig13753.2311.1|Name=mRNA_H-paniculata_contig13753.2311.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=272bp
MEEEWGVLVDNGTWESEDPERLPAGRKAIRTKWIFKRILREDGSVARYKA
RLVAQGFPQVESEDFFKTSAPLARISTLRTVFSLAAEHDFELEGMGLDRS
TTDSCLYFSRDDGGETNLLVVVYVDDLVMAGRREKVDEFKHNISHRFKMK
DLGSLSRVLGIEVRRDRPNVTITISQGSYIREVLKRYGFDECRGVPTPAE
GKVQISAPDRGRSGNSTEFRGMVRSLMYASTGTRPDIGYAVHQAARPMSG
RFQLVDADWAEDVEDRKSTTG*
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mRNA from alignment at H-paniculata_contig13753:4989..6608+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig13753.2311.1 ID=mRNA_H-paniculata_contig13753.2311.1|Name=mRNA_H-paniculata_contig13753.2311.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1620bp|location=Sequence derived from alignment at H-paniculata_contig13753:4989..6608+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTATCTAAGCGGGAGCCAAAATCCGCAGCAGAAGCATTAAAGGGTCCAGA GGCAGAAAAATGGCGCGCGGCAATGGAGGAAGAATGGGGGGTGTTGGTGG ACAATGGAACATGGGAAAGCGAAGACCCGGAGAGGTTACCGGCAGGGCGG AAGGCGATTCGTACGAAATGGATTTTCAAGCGGATACTGAGGGAGGACGG CAGCGTGGCACGCTACAAAGCGCGACTGGTGGCTCAAGGGTTTCCACAGG TGGAGAGTGAAGATTTCTTTAAAACCAGTGCCCCCTTAGCTCGCATATCG ACGTTACGTACTGTTTTTAGCCTGGCCGCCGAACATGATTTCGAATTAGA AGGCATGGGTGCAGATGCGGTGTATTTGAACACCCCGGTAGAAGAGCTGT TTGTTAAGCTACCCCCCAAGTTTTCCCCTTTCTCCTAAGACATACCGTTT GTGTGCTGCCTGCGTAAAAGCCTGTACGGCCTCAAGCAGATCGGCCGAAA CTGGAATAACGCTCTTGACGATTTTCTTGTTGGGATAGGACTCGACCGTT CCACTACCGACTCATGCCTGTACTTTTCCCGCGACGATGGGGGTGAAACA AACCTTCTGGTGGTCGTGTATGTTGACGACCTGGTCATGGCTGGCCGTCG TGAGAAAGTAGACGAGTTCAAGCATAACATAAGTCATCGTTTTAAGATGA AAGACTTGGGCTCTCTCTCGCGCGTGTTGGGAATAGAAGTACGACGTGAC CGCCCTAATGTTACCATAACCATCTCGCAGGGTAGCTACATCCGCGAGGT ACTAAAAAGATACGGTTTTGACGAGTGTCGAGGAGTACCCACCCCTGCAG AGGGAAAAGTGCAGATTTCGGCACCCGAGTCGACCGACAAGCCCTCCGAA CAGAAGTCACTCGGAGCTGTACTGTCGTACATAGGCACAGGGGTACAAAA AAGCAGCAGAGGGAGAAGTGGCAATTCAACTGAATTCAGAGGCATGGTAA GATCACTCATGTACGCCTCGACAGGAACTAGACCTGATATAGGATATGCG GTACACCAAGCAGCACGACCCATGTCGGGAAGGTTTCAGTACAGGCAAGC GCATTTTTCGTTATCTCAGTACTGTACCTGACCTCGGCATTACGTTCGGC GGTAAGAGTAATGGTCACGGTCTGAAAAGACTCGTTGATGCTGATTGGGC GGAAGATGTCGAGGACCGAAAGTCCACAACAGGATAAGTTTTCAAGCTGA ACGGTGGTGCGATAAGCTGGTGCTCTAGGAAGAAACAGTTAGCCACGTGG TCCAGTACAGAGGCAGAATACGTTGCTGGAGGAGAAGCGGGAAAGGAGAC GGTATATCATAGGGAGTTACTAGGATCGATAGGTTTCAGATGCAGGGGAG CACGACACTGTTTGAGGACAATAAATCAGCTATTAATCTCAGTAAGGGAT CTGGCGCACACTGCAGGACAAAGCACATCGGAGTCCGTTGGCGCAGAATT CGAGAGTGGATTCGGGAACAAGTATTGACATTGAAATACGTGCAGACCGG CGATCGACTTGCTGACATTTTAACGAAAGGACTAAGCAGACTGAAGTTTC AGAGACTGAGAAATTTACTC
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Coding sequence (CDS) from alignment at H-paniculata_contig13753:4989..6608+

>mRNA_H-paniculata_contig13753.2311.1 ID=mRNA_H-paniculata_contig13753.2311.1|Name=mRNA_H-paniculata_contig13753.2311.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1632bp|location=Sequence derived from alignment at H-paniculata_contig13753:4989..6608+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGGAAGAATGGGGGGTGTTGGTGGACAATGGAACATGGGAAAGCGA
AGACCCGGAGAGGTTACCGGCAGGGCGGAAGGCGATTCGTACGAAATGGA
TTTTCAAGCGGATACTGAGGGAGGACGGCAGCGTGGCACGCTACAAAGCG
CGACTGGTGGCTCAAGGGTTTCCACAGGTGGAGAGTGAAGATTTCTTTAA
AACCAGTGCCCCCTTAGCTCGCATATCGACGTTACGTACTGTTTTTAGCC
TGGCCGCCGAACATGATTTCGAATTAGAAGGCATGGATGGAGGAAGAATG
GGGGGTGTTGGTGGACAATGGAACATGGGAAAGCGAAGACCCGGAGAGGT
TACCGGCAGGGCGGAAGGCGATTCGTACGAAATGGATTTTCAAGCGGATA
CTGAGGGAGGACGGCAGCGTGGCACGCTACAAAGCGCGACTGGTGGCTCA
AGGGTTTCCACAGGTGGAGAGTGAAGATTTCTTTAAAACCAGTGCCCCCT
TAGCTCGCATATCGACGTTACGTACTGTTTTTAGCCTGGCCGCCGAACAT
GATTTCGAATTAGAAGGCATGGGACTCGACCGTTCCACTACCGACTCATG
CCTGTACTTTTCCCGCGACGATGGGGGTGAAACAAACCTTCTGGTGGTCG
TGTATGTTGACGACCTGGTCATGGCTGGCCGTCGTGAGAAAGTAGACGAG
TTCAAGCATAACATAAGTCATCGTTTTAAGATGAAAGACTTGGGCTCTCT
CTCGCGCGTGTTGGGAATAGAAGTACGACGTGACCGCCCTAATGTTACCA
TAACCATCTCGCAGGGTAGCTACATCCGCGAGGTACTAAAAAGATACGGT
TTTGACGAGTGTCGAGGAGTACCCACCCCTGCAGAGGGAAAAGTGCAGAT
TTCGGCACCCGAGACTCGACCGTTCCACTACCGACTCATGCCTGTACTTT
TCCCGCGACGATGGGGGTGAAACAAACCTTCTGGTGGTCGTGTATGTTGA
CGACCTGGTCATGGCTGGCCGTCGTGAGAAAGTAGACGAGTTCAAGCATA
ACATAAGTCATCGTTTTAAGATGAAAGACTTGGGCTCTCTCTCGCGCGTG
TTGGGAATAGAAGTACGACGTGACCGCCCTAATGTTACCATAACCATCTC
GCAGGGTAGCTACATCCGCGAGGTACTAAAAAGATACGGTTTTGACGAGT
GTCGAGGAGTACCCACCCCTGCAGAGGGAAAAGTGCAGATTTCGGCACCC
GACAGAGGGAGAAGTGGCAATTCAACTGAATTCAGAGGCATGGTAAGATC
ACTCATGTACGCCTCGACAGGAACTAGACCTGATATAGGATATGCGGTAC
ACCAAGCAGCACGACCCATGTCGGGAAGGTTTCACAGAGGGAGAAGTGGC
AATTCAACTGAATTCAGAGGCATGGTAAGATCACTCATGTACGCCTCGAC
AGGAACTAGACCTGATATAGGATATGCGGTACACCAAGCAGCACGACCCA
TGTCGGGAAGGTTTCAACTCGTTGATGCTGATTGGGCGGAAGATGTCGAG
GACCGAAAGTCCACAACAGGATAAACTCGTTGATGCTGATTGGGCGGAAG
ATGTCGAGGACCGAAAGTCCACAACAGGATAA
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