prot_H-paniculata_contig1374.2301.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1374.2301.1 vs. uniprot
Match: D8LKF5_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF5_ECTSI) HSP 1 Score: 305 bits (782), Expect = 4.360e-90 Identity = 177/280 (63.21%), Postives = 222/280 (79.29%), Query Frame = 0 Query: 29 AEAVPAFGDLSELLDSAGEVMASS-ERRGRANAAWAHVNEIRTMATQWMRRAKTCLRHDGAAAGVTLAVMKRHLSSGAAVPVDMPEYQELEKVASHWAAWEARALTCAATLESVPMEELASTTTIA-----GEN---DAEASKLLAEADAMTYGVKTNARDALSKALGRRGWAQRAGALVALGGVGTARPGVALPQALLSEAGKLGLLKSSEGGVS-LVERVRSLAEGTGTASRAREMLGSAVAEGGLGEDSPEEALAVAEGVLVAMRASPVAYPEEEKL 298 A +PAF ++S LLD+AGE MA+S +RRGRAN AW HVN+IR+MATQW+RRAKTCLR DGAAAGVTLAVM+RHLSSG AVPVDMPEY ELE+VA+ W AWE+RAL CAATLE+VP+E+LA T T+ GEN D +AS LL EA A ++G+KT+A+DAL++ALGR+GWAQRA A+++ VG ARP VAL Q+L++EAGKLGLL+++ G VS LV +V++LAEG G A+RAR++L V EGGL E S + L AEGVL +RA+PV YPEEE + Sbjct: 459 AAGLPAFSEVSALLDNAGEAMATSADRRGRANTAWQHVNDIRSMATQWIRRAKTCLRADGAAAGVTLAVMRRHLSSGDAVPVDMPEYHELERVATEWEAWESRALRCAATLEAVPLEDLAGTLTVCSPTPPGENGKADEDASGLLQEAAAFSHGIKTSAKDALTRALGRKGWAQRAVAVISCEAVGIARPSVALTQSLMTEAGKLGLLRAAGGAVSPLVTKVKALAEGEGPATRARDLL-KPVEEGGLSEASSDAELCGAEGVLGNLRATPVVYPEEESV 737
BLAST of mRNA_H-paniculata_contig1374.2301.1 vs. uniprot
Match: D8LKF7_ECTSI (TFIIS central domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKF7_ECTSI) HSP 1 Score: 64.3 bits (155), Expect = 7.810e-7 Identity = 74/157 (47.13%), Postives = 89/157 (56.69%), Query Frame = 0 Query: 518 GDTLSTWSKAAVTAAAAIAGPSALXXITAGXXXXXXXXXXXXXARIVAQLVAAGLGALGWHSWRAHASRAASPASRSTIAAAAATTTSLAQAHILLDAASPSDTNANIANMNG-GGTG---LIALEGMALARAQASPELMALRVAVQSKDSAVSLAW 670 GD LS WSK+ T G T XXXXXXXXXX +VAQ+VAAG+ +LGWHSWR A+RAA A + + A T LA H LLDA I+ NG GG+G + LEG ALA A AS E ALR AV +KD+A ++AW Sbjct: 46 GDNLSAWSKSGDTT-----GQEKKGMPTXXXXXXXXXXXXGSGRELVAQIVAAGVRSLGWHSWRVLAARAAFNALPGSNPSPPAKPT-LADGHALLDAV--------ISPGNGSGGSGAKPVAVLEGAALATAAASAEFAALREAVAAKDAAATMAW 188 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1374.2301.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig1374.2301.1 ID=prot_H-paniculata_contig1374.2301.1|Name=mRNA_H-paniculata_contig1374.2301.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=676bpback to top |