prot_H-paniculata_contig1367.2257.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1367.2257.1
Unique Nameprot_H-paniculata_contig1367.2257.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length235
Homology
BLAST of mRNA_H-paniculata_contig1367.2257.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 9.080e-69
Identity = 116/260 (44.62%), Postives = 143/260 (55.00%), Query Frame = 0
Query:    1 DDLSRYVWLESALEYTARLATETILRWCVVFGPPRVFVSDTVRHFNNRLLSLLADGLGAEHCFSVGNSAWSNGTVKLMNREVINTFNTVLNEANRPVREWPAAVPMVQWALNTAHRPWLGPTPYQLMFGGAPRTMLSLLTDNSGDEWRVEDLDVPQERMQ--------------------------GPANGAGPWPNFEVGDYFLTARVRKLGSVPKLIGTWTGPWRVVGCGSAHVYKVQDIVTGVIKDVHEVRMRTYAE 234
            DDLS + W+E     TARL  + +L WC   G P V+VSDT  HF N ++  L   LG E  F+V NS WSNGT + M REV+ T   VL E  R +R+W   VP VQWALNTA+R     TPY +MFG APRT  S L  +SG+ W ++ LD  + + Q                            A   G  P F VGDY + ARVR+ G  PKL  TWTGPWRVV     HVY VQ+IV G ++DVH  R+R YA+
Sbjct:   73 DDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREVVRTMKAVLQERRRNLRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDATKLKQQVQNVIQTQAVLHKQIQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYAD 332          
BLAST of mRNA_H-paniculata_contig1367.2257.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 227 bits (578), Expect = 1.340e-64
Identity = 116/260 (44.62%), Postives = 143/260 (55.00%), Query Frame = 0
Query:    1 DDLSRYVWLESALEYTARLATETILRWCVVFGPPRVFVSDTVRHFNNRLLSLLADGLGAEHCFSVGNSAWSNGTVKLMNREVINTFNTVLNEANRPVREWPAAVPMVQWALNTAHRPWLGPTPYQLMFGGAPRTMLSLLTDNSGDEWRVEDLDVPQERMQ--------------------------GPANGAGPWPNFEVGDYFLTARVRKLGSVPKLIGTWTGPWRVVGCGSAHVYKVQDIVTGVIKDVHEVRMRTYAE 234
            DDLS + W+E     TARL  + +L WC   G P V+VSDT  HF N ++  L   LG E  F+V NS WSNGT + M RE++ T   VL E  R VR+W   VP VQWALNTA+R     TPY +MFG APRT  S L  +SG+ W ++ LD  + + Q                            A   G  P F VGDY + ARVR+ G  PKL  TWTGPWRVV     HVY VQ+IV G ++DVH  R+R YA+
Sbjct: 1296 DDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDATKLKQQVQNVIQTQAVLHKQVQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYAD 1555          
BLAST of mRNA_H-paniculata_contig1367.2257.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 4.930e-49
Identity = 101/240 (42.08%), Postives = 138/240 (57.50%), Query Frame = 0
Query:    1 DDLSRYVWLESALEYTARLATETILRWCVVFGPPRVFVSDTVRHFNNRLLSLLADGLGAEHCFSVGNSAWSNGTVKLMNREVINTFNTVLNEANRPVREWPAAVPMVQWALNTAHRPWLGPTPYQLMFGGAPRTMLSLLTDNSGDEWRVEDLDVPQERMQGP-ANGAGPWPNFEVGDYFLTARVR-----KLGSVPKLIGTWTGPWRVVGCGSAHVYKVQDIVTGVIKDVHEVRMRTYAE 234
            DD+S +VWLE     TA L  + +L WC + G P V+VSDT  HF N +++ L   LG +  FSV NS WSNGT + M REV+ T   ++ E     R+W   VP VQWALNTA R   G TPY +MFG APRT LS L  ++G EW+V+ LD    R++      A    + EV D    +R +     ++GS+P  +    G + +V     HVY VQ+IV+G ++DVH  R+R YA+
Sbjct: 1398 DDMSNWVWLEPTGACTACLTAQHLLTWCKILGVPEVWVSDTASHFKNHMMAALETALGVDRNFSVANSPWSNGTCERMMREVVRTLKAMIQEERGRTRDWVDLVPAVQWALNTAFRERYGSTPYHVMFGRAPRTALSTLASSTGAEWKVDVLDEKSLRLKVQHVVEAQRHLHKEVLDKVQASRSKHRASARVGSLPDFV---VGDYVIVAAERLHVYGVQNIVSGEVRDVHVARLRFYAD 1634          
BLAST of mRNA_H-paniculata_contig1367.2257.1 vs. uniprot
Match: A0A2P4XSG7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XSG7_9STRA)

HSP 1 Score: 119 bits (297), Expect = 1.870e-27
Identity = 79/241 (32.78%), Postives = 116/241 (48.13%), Query Frame = 0
Query:    1 DDLSRYVWLESALEYTARLATETILRWCVVFGPPRVFVSDTVRHFNNRLLSLLADGLGAEHCFSVGNSAWSNGTVKLMNREVINTFNTVLNEANRPVREWPAAVPMVQWALNTAHRPWLGPTPYQLMFGGAPRT-MLSLLTDNSGDEWRVED------LDVPQERMQGPANGAGPWPNFEVGDYFLTARVRKLGSVPKLIGTWTGPWRVVGCGSAHVYKVQDIVTGVIKDVHEVRMRTYAE 234
            DD S++VWL      TA    E ++ W   FG  R +VSD   HF N+++  L   LGA H F+     W+NGTV+++NREV+     +L+E      EWP  + +VQ  LN +        P   + G AP T M  L   N  D   V D      LD  Q R             F+VGD+ L A V +     KL   W GP +V    S  ++++++++TG  ++VH  R++ YA+
Sbjct:  153 DDASKFVWLMPTDAATADNTFECLMTWFASFGVVRWWVSDQGTHFKNKVIEGLQHALGAHHHFTTARCPWANGTVEVVNREVLRCCRALLSEWRLQSGEWPRVIKIVQMVLNHS--------PCSAIDGVAPVTAMTGLKAMNPTDPLAVPDPIQVATLDEIQRRKHHNGKKGTTMAQFDVGDFVLYADVWQHARA-KLRVKWCGPAQVTAATSNWIFEIENLITGERREVHASRLKFYAD 384          
BLAST of mRNA_H-paniculata_contig1367.2257.1 vs. uniprot
Match: A0A2P4XGX1_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XGX1_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.400e-25
Identity = 75/241 (31.12%), Postives = 116/241 (48.13%), Query Frame = 0
Query:    1 DDLSRYVWLESALEYTARLATETILRWCVVFGPPRVFVSDTVRHFNNRLLSLLADGLGAEHCFSVGNSAWSNGTVKLMNREVINTFNTVLNEANRPVREWPAAVPMVQWALNTAHRPWLGPTPYQLMFGGAPRTMLSLL-----TDNSG--DEWRVEDLDVPQERMQGPANGAGPWPNFEVGDYFLTARVRKLGSVPKLIGTWTGPWRVVGCGSAHVYKVQDIVTGVIKDVHEVRMRTYAE 234
            DD S++VWL      TA    E ++RW  +FG  R +VSD   HF N++L  L   LGA   F+     W+NGTV+++NREV+     +L+E      EWP  +   Q  LN +        P   + G AP T ++ L     TD     D  +V  LD  Q R             F++GD+ L A V +     KL   W GP +V    S  +++++++++G  ++VH  R++ Y +
Sbjct:   61 DDTSKFVWLMPTDAATADNTFECLMRWFAMFGVVRWWVSDQGTHFKNKVLEGLQHALGAHRHFTTARCTWTNGTVEVVNREVLRCCRALLSEWRLQSGEWPRVIKNFQMVLNHS--------PCSAIDGVAPVTAMTGLKVMDPTDPLAVPDPIQVATLDDFQRRKHHNGIKGTTMAQFDMGDFVLYADVWQYARA-KLRVKWCGPAQVTAAASNGIFEIENLISGERREVHAGRLKFYTD 292          
BLAST of mRNA_H-paniculata_contig1367.2257.1 vs. uniprot
Match: W2IAR5_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2IAR5_PHYPR)

HSP 1 Score: 101 bits (252), Expect = 4.910e-21
Identity = 69/230 (30.00%), Postives = 112/230 (48.70%), Query Frame = 0
Query:   19 LATETILRWCVVFGPPRVFVSDTVRHFNNRLLSLLADGLGAEHCFSVGNSAWSNGTVKLMNREVINTFNTVLNEANRPVREWPAAVPMVQWALNTAHRPWLG-------------PTPYQLMFGGAPRTMLSLLTDNSGDEWRVEDLDVPQERMQGPANGAGP-WPNFEVGDYFLTARVRKLGSVPKLIGTWTGPWRVVGCGSAHVYKVQDIVTGVIKDVHEVRMRTYAE 234
            +AT  IL W   FG P V+VS    HF N +++ L+  L ++  F +    W NG+V+ +NR+++     +  E     ++W   VP+VQ +LN    P LG             P+P    +    + ++ +  ++   +  +  L      M  P    G    NF+VGDY L +RV +     KL+ TW GP+RVV     H ++++ +VTG   DVHE R++ YA+
Sbjct:  431 VATAAILDWHSRFGAPPVWVSGNGSHFKNEVVAELSKRLKSQQNFILAYCPWINGSVERVNRDILQVLRVMTLEYKVLTKDWEYLVPLVQASLNHTALPSLGNRAPVELFTGLQCPSPLAEFYHPGSKKLVIVPKNSDAIDKHLAQLRQSLCTMHQPIKDRGDNVVNFDVGDYVLRSRVDEK-KRNKLLVTWQGPYRVVRA-DVHSFRIRHLVTGCELDVHESRLKFYAD 658          
BLAST of mRNA_H-paniculata_contig1367.2257.1 vs. uniprot
Match: A0A6A4EJU1_9STRA (Uncharacterized protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4EJU1_9STRA)

HSP 1 Score: 100 bits (248), Expect = 5.770e-21
Identity = 78/267 (29.21%), Postives = 121/267 (45.32%), Query Frame = 0
Query:    1 DDLSRYVWLESALEYTARLATETILRWCVVFGPPRVFVSDTVRHFNNRLLSLLADGLGAEHCFSVGNSAWSNGTVKLMNREVINTFNTVLNEANRPVREWPAAVPMVQWALNTAHRPWLGP----TPYQLMFGGAPRTMLSLLTDNSGDE----WRVEDLDVPQERMQGPANGAGP------------------------WPNFEVGDYFLTARVRKLGSVPKLIGTWTGPWRVVGCGSAHVYKVQDIVTGVIKDV-HEVRMRTYAE 234
            D +S YV L + L+ TA  A + ++ W   FG    +VSD   HF N+++  L   LGA+H F    + W+NGTV+++NREV+     +L+E    +R+WPA +P+VQ ALN+     LG     T +  + GG   T  S+L     +E    W  +++    + ++   +G                              F  GD+ L A      S  KL   W GP R+V   +   ++VQDIV      V H  R++ Y +
Sbjct:   16 DGMSGYVELVACLQATADTACQALIDWFKRFGVVHQWVSDQGAHFRNQIVERLQRALGAQHHFVTAYTPWANGTVEVVNREVLKCMKALLSERRLAIRDWPALLPVVQAALNSMPADRLGGKSPLTAFTALPGGTQLT--SILHPRDPEEASIHWVAQEIQEHLDSVRVALDGLHAEMVNASEKRRRAARERHARRQGVKLQKFSEGDFVLAATATGR-SGNKLALVWRGPKRIVRVLNDFTFEVQDIVQPFEMSVRHASRLQLYRD 279          
BLAST of mRNA_H-paniculata_contig1367.2257.1 vs. uniprot
Match: A0A6A3Z230_9STRA (RNA-directed DNA polymerase n=12 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Z230_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.020e-20
Identity = 83/267 (31.09%), Postives = 121/267 (45.32%), Query Frame = 0
Query:    1 DDLSRYVWLESALEYTARLATETILRWCVVFGPPRVFVSDTVRHFNNRLLSLLADGLGAEHCFSVGNSAWSNGTVKLMNREVINTFNTVLNEANRPVREWPAAVPMVQWALNTAHRPWLGP----TPYQLMFGGAPRTMLSLLTDNSGDEWRV--------EDLDVPQERMQG-------------------PANGAG-PWPNFEVGDYFLTARVRKLGSVPKLIGTWTGPWRVVGCGSAHVYKVQDIVTGVIKDV-HEVRMRTYAE 234
            D +S YV L + L+ TA  A + ++ W   FG    +VSD   HF N+++  L   LGA+H F    + W+NGTV+++NREV+     +L+E    +R+WPA +P+VQ ALN+     LG     T +  + GG   T  S+L     +E  +        E LD  +  M G                    A   G     F  GD+ L A      S  KL   W GP R+V   +   ++VQDIV      V H  R++ Y +
Sbjct: 1017 DGMSGYVELVACLQATADTACQALIDWFKRFGVVHQWVSDQGAHFRNQIVERLQRALGAQHHFVTAYTPWANGTVEVVNREVLKCMKALLSERRLAIRDWPALLPVVQAALNSMPADRLGGKSPLTAFTALPGGTQLT--SILHPRDPEEASIHWVAQEIQEHLDSVRVAMDGLHAEMVNASEKRRRSARERHARRQGVKLQKFSEGDFVLAATATGR-SGNKLALVWRGPKRIVRVLNDFTFEVQDIVQPFEMSVRHASRLQLYRD 1280          
BLAST of mRNA_H-paniculata_contig1367.2257.1 vs. uniprot
Match: H3H3G8_PHYRM (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H3G8_PHYRM)

HSP 1 Score: 100 bits (249), Expect = 1.380e-20
Identity = 80/264 (30.30%), Postives = 122/264 (46.21%), Query Frame = 0
Query:    1 DDLSRYVWLESALEYTARLATETILRWCVVFGPPRVFVSDTVRHFNNRLLSLLADGLGAEHCFSVGNSAWSNGTVKLMNREVINTFNTVLNEANRPVREWPAAVPMVQWALN--TAHRPWLGPTP---YQLMFGGAPRTMLSLLTDNSGDEWRVEDLDVPQERMQGPANGAGP------------------------WPNFEVGDYFLTARVRKLGSVPKLIGTWTGPWRVVGCGSAHVYKVQDIVTGVIKDV-HEVRMRTYAE 234
            D +S +V L S  + TA  A + ++ W   FG    +VSD   HF N+++ LL   LG +H F+   + W+NGTVK++NRE++     +L+E    VR+WPA +P+VQ ALN  TA R   G TP   +  + GGA    L L      +EW    +     +++   +G                            P F  GD+ L A      S  KL   W GP R++   + + ++VQDIV      + H  R++ Y +
Sbjct: 1028 DGMSGFVELISFADATADNAYQGLIDWFKRFGVEPQWVSDQGAHFRNQIIELLQRALGVQHHFTTAYTPWANGTVKVVNREILKCVRALLSERKLHVRDWPAVLPVVQAALNGMTADR-LNGVTPLTAFTALPGGAQLRHL-LHPHAPTEEWVTAAVQAHLAKVRAALDGMHAELVDASEKRRLAARARHARHQGVRLPKFSEGDFVLVATATDR-SGHKLALIWRGPKRIIRALNDYTFEVQDIVVPFAVVIRHASRLQLYRD 1288          
BLAST of mRNA_H-paniculata_contig1367.2257.1 vs. uniprot
Match: A0A6A3QSE0_9STRA (Integrase catalytic domain-containing protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3QSE0_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.050e-20
Identity = 75/252 (29.76%), Postives = 110/252 (43.65%), Query Frame = 0
Query:    1 DDLSRYVWLESALEYTARLATETILRWCVVFGPPRVFVSDTVRHFNNRLLSLLADGLGAEHCFSVGNSAWSNGTVKLMNREVINTFNTVLNEANRPVREWPAAVPMVQWALNTAHRPWLGP----TPYQLMFGGA-------PRTMLSLLTDNSGDEWRVEDLDVPQERMQGPANGAGP------------------------WPNFEVGDYFLTARVRKLGSVPKLIGTWTGPWRVVGCGSAHVYKVQDIV 217
            D +S YV L + L+ TA  A   ++ W   FG    + SD   HF N+++  L   LGA H F    + W+NGTV+++NREV+     +L+E    VR+WPA +P+VQ ALN      LG     T +  + GG+       PR ++  L      EW  +DL    E ++   +G                              F  GD+ L A      S  KL   W GP R+V   +   ++V DI+
Sbjct:   16 DGMSGYVELVACLQATADTAYRALIDWFKRFGVVHQWTSDQGAHFRNQIIEQLQRALGAHHHFVTAYTPWANGTVEVVNREVLKAMKALLSERRLFVRDWPALLPVVQAALNGMPANRLGGKTPLTAFTALAGGSQLTSILHPRELVDTLV-----EWVTQDLQAHLEEVRVALDGLHAEMVDASEKRRRAARERHSLRPGVKLQKFSEGDFVLAATATGR-SGNKLALLWRGPKRIVKALNDFTFEVTDII 261          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1367.2257.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JVS6_9PHAE9.080e-6944.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7F6_9PHAE1.340e-6444.62Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5A5_9PHAE4.930e-4942.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2P4XSG7_9STRA1.870e-2732.78Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A2P4XGX1_9STRA1.400e-2531.12Integrase catalytic domain-containing protein n=1 ... [more]
W2IAR5_PHYPR4.910e-2130.00Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
A0A6A4EJU1_9STRA5.770e-2129.21Uncharacterized protein n=3 Tax=Phytophthora fraga... [more]
A0A6A3Z230_9STRA1.020e-2031.09RNA-directed DNA polymerase n=12 Tax=Phytophthora ... [more]
H3H3G8_PHYRM1.380e-2030.30Integrase catalytic domain-containing protein n=1 ... [more]
A0A6A3QSE0_9STRA2.050e-2029.76Integrase catalytic domain-containing protein n=4 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..160
e-value: 5.4E-24
score: 86.5
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1..131
score: 13.254
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1367contigH-paniculata_contig1367:11667..12455 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1367.2257.1mRNA_H-paniculata_contig1367.2257.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1367 11667..12455 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1367.2257.1 ID=prot_H-paniculata_contig1367.2257.1|Name=mRNA_H-paniculata_contig1367.2257.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=235bp
DDLSRYVWLESALEYTARLATETILRWCVVFGPPRVFVSDTVRHFNNRLL
SLLADGLGAEHCFSVGNSAWSNGTVKLMNREVINTFNTVLNEANRPVREW
PAAVPMVQWALNTAHRPWLGPTPYQLMFGGAPRTMLSLLTDNSGDEWRVE
DLDVPQERMQGPANGAGPWPNFEVGDYFLTARVRKLGSVPKLIGTWTGPW
RVVGCGSAHVYKVQDIVTGVIKDVHEVRMRTYAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf